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Moc10g14320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:10983277..10984930
RNA-Seq ExpressionMoc10g14320
SyntenyMoc10g14320
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73722.1 hypothetical protein VITISV_041002 [Vitis vinifera]2.1e-1442.86Show/hide
Query:  VSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA-------------------EMGYRFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKT
        VSF KT  TPK+ KLELVHTD +GP  V+S+G                    + GYRFWD+QN+KII S+N+IFNE+V+YKD + V    TE+D+  KK+
Subjt:  VSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA-------------------EMGYRFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKT

Query:  QYISSPEVETKTIEIEDQN
        ++++  E+   T++ E ++
Subjt:  QYISSPEVETKTIEIEDQN

CAN80991.1 hypothetical protein VITISV_021529 [Vitis vinifera]8.3e-1132.89Show/hide
Query:  GSMSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA----------------------------------------------------EMGYRFWDDQ
        G    +SF KT  TPK  KLELVHTD WGPS ++S+G                                                     + GYRFWD+Q
Subjt:  GSMSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA----------------------------------------------------EMGYRFWDDQ

Query:  NKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE
        N+KII S+N+IFNE V+YKD + V    T++D+  KK ++++  E+   T++
Subjt:  NKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE

KAE8706604.1 putative potassium transporter 12 [Hibiscus syriacus]3.2e-1029.49Show/hide
Query:  RDILENYVAGNHGKVYQGLLDSEGCEI---------SFDQGNWK--------------------------VTKGSMS-------------------RVSF
        ++I+ENYV+G+ GKV+  L D E  +I           +Q NWK                          ++KG++S                   +VSF
Subjt:  RDILENYVAGNHGKVYQGLLDSEGCEI---------SFDQGNWK--------------------------VTKGSMS-------------------RVSF

Query:  SKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGY-RFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIEIEDQNII
         K   T K+ KLELVHTD WGPS VSS+ + + Y  F DD  KKII  +++IFNE V+YK  + ++   ++ +  TK  +++   E+    ++I  + + 
Subjt:  SKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGY-RFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIEIEDQNII

Query:  TPEETAVGSDEQVVESD
            T    DE++   D
Subjt:  TPEETAVGSDEQVVESD

RVW73171.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.8e-0932.72Show/hide
Query:  RDILENYVAGNHGKVY------------------------------------------QGLLDSEGCEISFDQGNWKVTKGS------------------
        R+I++NYVAG+ GKVY                                           G LD EG  I F  G WKVTKG+                  
Subjt:  RDILENYVAGNHGKVY------------------------------------------QGLLDSEGCEISFDQGNWKVTKGS------------------

Query:  -----------MSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGY-RFWDDQNKKI
                     +VSF KT  TPK+ KLELVHTD WGPS V+S+G    Y  F DD ++K+
Subjt:  -----------MSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGY-RFWDDQNKKI

RVX07359.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.3e-1530.36Show/hide
Query:  RDILENYVAGNHGKVY------------------------------------------QGLLDSEGCEISFDQGNWKVTKGSMSRVSFSKT---------
        R+I++NYVAG+ GKVY                                           G LD EG  I F  G WKVTKG+    S  K          
Subjt:  RDILENYVAGNHGKVY------------------------------------------QGLLDSEGCEISFDQGNWKVTKGSMSRVSFSKT---------

Query:  ----------------DSTPKSTKLELVHTDAWGPSQVSSIGAEMGY------------------------------------------RFWDDQNKKII
                        D TPK+ KLELVHTD WGPS V+S+G    Y                                          RFWD+QN+KII
Subjt:  ----------------DSTPKSTKLELVHTDAWGPSQVSSIGAEMGY------------------------------------------RFWDDQNKKII

Query:  ISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE
         S+N+IFNE+VLYKD + V    TE+D+  KK+++++  E+   T++
Subjt:  ISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE

TrEMBL top hitse value%identityAlignment
A0A438JEH9 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-1530.36Show/hide
Query:  RDILENYVAGNHGKVY------------------------------------------QGLLDSEGCEISFDQGNWKVTKGSMSRVSFSKT---------
        R+I++NYVAG+ GKVY                                           G LD EG  I F  G WKVTKG+    S  K          
Subjt:  RDILENYVAGNHGKVY------------------------------------------QGLLDSEGCEISFDQGNWKVTKGSMSRVSFSKT---------

Query:  ----------------DSTPKSTKLELVHTDAWGPSQVSSIGAEMGY------------------------------------------RFWDDQNKKII
                        D TPK+ KLELVHTD WGPS V+S+G    Y                                          RFWD+QN+KII
Subjt:  ----------------DSTPKSTKLELVHTDAWGPSQVSSIGAEMGY------------------------------------------RFWDDQNKKII

Query:  ISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE
         S+N+IFNE+VLYKD + V    TE+D+  KK+++++  E+   T++
Subjt:  ISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE

A0A6A3APN4 Putative potassium transporter 121.5e-1029.49Show/hide
Query:  RDILENYVAGNHGKVYQGLLDSEGCEI---------SFDQGNWK--------------------------VTKGSMS-------------------RVSF
        ++I+ENYV+G+ GKV+  L D E  +I           +Q NWK                          ++KG++S                   +VSF
Subjt:  RDILENYVAGNHGKVYQGLLDSEGCEI---------SFDQGNWK--------------------------VTKGSMS-------------------RVSF

Query:  SKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGY-RFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIEIEDQNII
         K   T K+ KLELVHTD WGPS VSS+ + + Y  F DD  KKII  +++IFNE V+YK  + ++   ++ +  TK  +++   E+    ++I  + + 
Subjt:  SKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGY-RFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIEIEDQNII

Query:  TPEETAVGSDEQVVESD
            T    DE++   D
Subjt:  TPEETAVGSDEQVVESD

A0A7N2L2F6 Uncharacterized protein1.1e-1134.69Show/hide
Query:  GSMSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA-----------------------------------------------EMGYRFWDDQNKKII
        G   + SF KT  T K+ KLELVHTD W PS V+S+G                                                + GYRFWD+QN+KII
Subjt:  GSMSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA-----------------------------------------------EMGYRFWDDQNKKII

Query:  ISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE
         S+NMIFNE+V+YKD + V    TE+D+  KK+++++  E+   T++
Subjt:  ISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE

A5AS33 CCHC-type domain-containing protein1.0e-1442.86Show/hide
Query:  VSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA-------------------EMGYRFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKT
        VSF KT  TPK+ KLELVHTD +GP  V+S+G                    + GYRFWD+QN+KII S+N+IFNE+V+YKD + V    TE+D+  KK+
Subjt:  VSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA-------------------EMGYRFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKT

Query:  QYISSPEVETKTIEIEDQN
        ++++  E+   T++ E ++
Subjt:  QYISSPEVETKTIEIEDQN

A5BBW7 Uncharacterized protein4.0e-1132.89Show/hide
Query:  GSMSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA----------------------------------------------------EMGYRFWDDQ
        G    +SF KT  TPK  KLELVHTD WGPS ++S+G                                                     + GYRFWD+Q
Subjt:  GSMSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGA----------------------------------------------------EMGYRFWDDQ

Query:  NKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE
        N+KII S+N+IFNE V+YKD + V    T++D+  KK ++++  E+   T++
Subjt:  NKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTATGCCCAAAGCGGCAATATCATACCATTATAGAGATACTCGGGGTACGAGGGGTACCTTTTTCCTTAACAAGCGGTATCAGAGCCATGGTCTAAACCTAGC
TGTGTCGGTGAATCCTCGAGTGCTGAACAAAGAAGTGAGCAAACTCTCGTTTCTGATCGCCGAGAGTAGACGAATGAGTGACTACTTTAGGGGAGGACAACGTGACATTC
TTGAGAATTATGTTGCAGGAAATCATGGAAAAGTGTATCAGGGATTGCTAGATAGTGAAGGATGTGAAATATCCTTCGATCAAGGAAACTGGAAAGTTACAAAGGGTTCC
ATGAGTCGTGTCAGTTTCTCAAAGACAGATTCAACGCCAAAGTCTACAAAATTGGAGTTGGTTCACACCGATGCGTGGGGGCCTTCTCAAGTTTCTTCCATTGGAGCTGA
GATGGGTTACAGATTTTGGGATGACCAAAACAAGAAGATTATCATAAGCAAGAACATGATCTTCAATGAGAAAGTCTTATACAAAGACATAAATAAAGTTGATTTAGGAA
AGACAGAGTTAGATGAAAGCACAAAGAAGACTCAGTATATAAGTTCTCCTGAGGTTGAGACTAAAACAATAGAGATTGAAGATCAGAATATAATTACTCCTGAAGAAACA
GCTGTGGGATCTGATGAACAGGTTGTGGAATCTGATGAACCAGTTGCGGAAACTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTATGCCCAAAGCGGCAATATCATACCATTATAGAGATACTCGGGGTACGAGGGGTACCTTTTTCCTTAACAAGCGGTATCAGAGCCATGGTCTAAACCTAGC
TGTGTCGGTGAATCCTCGAGTGCTGAACAAAGAAGTGAGCAAACTCTCGTTTCTGATCGCCGAGAGTAGACGAATGAGTGACTACTTTAGGGGAGGACAACGTGACATTC
TTGAGAATTATGTTGCAGGAAATCATGGAAAAGTGTATCAGGGATTGCTAGATAGTGAAGGATGTGAAATATCCTTCGATCAAGGAAACTGGAAAGTTACAAAGGGTTCC
ATGAGTCGTGTCAGTTTCTCAAAGACAGATTCAACGCCAAAGTCTACAAAATTGGAGTTGGTTCACACCGATGCGTGGGGGCCTTCTCAAGTTTCTTCCATTGGAGCTGA
GATGGGTTACAGATTTTGGGATGACCAAAACAAGAAGATTATCATAAGCAAGAACATGATCTTCAATGAGAAAGTCTTATACAAAGACATAAATAAAGTTGATTTAGGAA
AGACAGAGTTAGATGAAAGCACAAAGAAGACTCAGTATATAAGTTCTCCTGAGGTTGAGACTAAAACAATAGAGATTGAAGATCAGAATATAATTACTCCTGAAGAAACA
GCTGTGGGATCTGATGAACAGGTTGTGGAATCTGATGAACCAGTTGCGGAAACTGATTAG
Protein sequenceShow/hide protein sequence
MKAMPKAAISYHYRDTRGTRGTFFLNKRYQSHGLNLAVSVNPRVLNKEVSKLSFLIAESRRMSDYFRGGQRDILENYVAGNHGKVYQGLLDSEGCEISFDQGNWKVTKGS
MSRVSFSKTDSTPKSTKLELVHTDAWGPSQVSSIGAEMGYRFWDDQNKKIIISKNMIFNEKVLYKDINKVDLGKTELDESTKKTQYISSPEVETKTIEIEDQNIITPEET
AVGSDEQVVESDEPVAETD