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Moc10g14330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionChromo domain-containing protein
Genome locationchr10:10986443..10987392
RNA-Seq ExpressionMoc10g14330
SyntenyMoc10g14330
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036835.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.3e-0650.82Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQSP
        G VAY LAL     I+ VFHVS L+ A+  NLP+ PIP +L+PDL    +P  +LG+R SP
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQSP

KAA0039528.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-0655Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS
        G VAYRLALP+   IH VFHVS L  A G N PLFPIP  L+ DL +Q   + +LG+R++
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS

KAG6607443.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0948Show/hide
Query:  NLLVNGVTSKDCLFRGMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS
        NLL        C   G++AY+LALP  V +H VFHVSQL+ A+  N P + +PP+L  DL VQ  P+A+LG+R S
Subjt:  NLLVNGVTSKDCLFRGMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS

XP_024030614.1 uncharacterized protein LOC112094294 [Morus notabilis]7.3e-0653.45Show/hide
Query:  VAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS
        VAYRL L    +IHL+FHVSQLR A G +L    +PP L PDL+ Q  P  +L MR S
Subjt:  VAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS

XP_031257121.1 uncharacterized protein LOC116115112 [Pistacia vera]2.8e-0546.55Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMR
        G VAYRLALP    IH VFHVSQL+ +   ++P+ P+P  L+ DL++  +P ++L +R
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMR

TrEMBL top hitse value%identityAlignment
A0A2P5DQU9 Ribonuclease H-like domain containing protein (Fragment)1.3e-0550Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMR
        G VAY+L LP   S+H VFHVSQL  A G + P+  +PP LS +L++   P A+LG+R
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMR

A0A5D3B7S6 Ty3/gypsy retrotransposon protein1.6e-0650.82Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQSP
        G VAY LAL     I+ VFHVS L+ A+  NLP+ PIP +L+PDL    +P  +LG+R SP
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQSP

A0A5D3CTU6 Ty3-gypsy retrotransposon protein7.2e-0755Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS
        G VAYRLALP+   IH VFHVS L  A G N PLFPIP  L+ DL +Q   + +LG+R++
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQS

A0A6L2L3P9 Putative mitochondrial protein1.3e-0547.46Show/hide
Query:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQ
        G VAYRL LP+  SIH VFHVSQLR   G  +P    P  L+ D++++ +P  +LG+R+
Subjt:  GMVAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQ

A0A803PV97 Uncharacterized protein2.3e-0555.36Show/hide
Query:  VAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMR
        VAYRL LP G SIH VFHVSQLRAA G +     +PPSL+ DL+    P  +L +R
Subjt:  VAYRLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTTGGGGAGGAGTGAATTTCATCTTGTGAAGTTATGTTC
CCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATGTTAAGTTGACGACTCGAGCCACTCTCACCCATACAGATCAAAGGACAAGCCCTCACGGGCAGGAGTCCA
TAACTCACTCAAGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAATAGCAACCTATTAGTTAACGGTGTTACATCTAAAGATTGCCTATTTCGTGGCATGGTGGCTTAT
CGCCTAGCACTTCCTGAGGGCGTCTCCATTCATCTCGTTTTCCATGTCTCCCAACTCCGAGCAGCTTCAGGCGGTAATCTTCCTCTGTTCCCTATTCCCCCTTCGTTGTC
CCCGGATCTCAAAGTCCAGTTTCGACCCATGGCAATCTTAGGCATGCGGCAGTCTCCACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTTGGGGAGGAGTGAATTTCATCTTGTGAAGTTATGTTC
CCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATGTTAAGTTGACGACTCGAGCCACTCTCACCCATACAGATCAAAGGACAAGCCCTCACGGGCAGGAGTCCA
TAACTCACTCAAGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAATAGCAACCTATTAGTTAACGGTGTTACATCTAAAGATTGCCTATTTCGTGGCATGGTGGCTTAT
CGCCTAGCACTTCCTGAGGGCGTCTCCATTCATCTCGTTTTCCATGTCTCCCAACTCCGAGCAGCTTCAGGCGGTAATCTTCCTCTGTTCCCTATTCCCCCTTCGTTGTC
CCCGGATCTCAAAGTCCAGTTTCGACCCATGGCAATCTTAGGCATGCGGCAGTCTCCACAATAA
Protein sequenceShow/hide protein sequence
MRGWGPLFKSRSQHLREHSSTPLKLGRSEFHLVKLCSQLPTRSRPQNGRNVKLTTRATLTHTDQRTSPHGQESITHSRLRMSCLVILRNSNLLVNGVTSKDCLFRGMVAY
RLALPEGVSIHLVFHVSQLRAASGGNLPLFPIPPSLSPDLKVQFRPMAILGMRQSPQ