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Moc10g14380 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14380
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:11010903..11012201
RNA-Seq ExpressionMoc10g14380
SyntenyMoc10g14380
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY92947.1 hypothetical protein Acr_08g0013430 [Actinidia rufa]4.3e-3443.69Show/hide
Query:  SWMDPITDFIR-GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG--LVEHY---------EP----------------------TTN
        +W+D I D++R G  P+D  + R+L  R+ARF + +G LY+R FS PLL+CL PEE   + E Y         EP                        N
Subjt:  SWMDPITDFIR-GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG--LVEHY---------EP----------------------TTN

Query:  EDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAE
        E  L LNLDLL+E+R  A+LR A Y+GR+A++YN RV  R+F  G LV RRV         G L P WEGP+++  + RPGT  L DL G  L+HPWNAE
Subjt:  EDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAE

Query:  HLKRYY
        HLK+YY
Subjt:  HLKRYY

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]1.8e-3268Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP
        VE+YE   NE+ LLL LDL++E+R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KG+VRPGTY+LADL+G +L+HP
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]7.0e-0855.56Show/hide
Query:  MDPITDFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG
        MDPI DF+ G    D KE +++AR+ AR+++R+G LYR GFSLPLLKC+  E+G
Subjt:  MDPITDFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]2.2e-3042.47Show/hide
Query:  ESSWMDPITDFIR-GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG---LVEHYEPTT-NEDG-------LLLNLDLLEERRAMAQL
        E +WM PI  +++ G  P+   E RKL  R+AR+++ D  LY+RGFS P L+CL P+E    L E +E    N  G       + LNLDL++E R  A+ 
Subjt:  ESSWMDPITDFIR-GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG---LVEHYEPTT-NEDG-------LLLNLDLLEERRAMAQL

Query:  RLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHV-----GALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYY
        R+A Y+  MAR ++A V+PR F +G LVL++V           L P WEGP+ +    RPG+Y L  L    L HPWN EHL+RYY
Subjt:  RLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHV-----GALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYY

XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]8.2e-3334.65Show/hide
Query:  MEIGAPESSWMDPITDF-IRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPE-----------------------EGL-----------
        M++   + +WMD I +F + G+ P DP + RKL  ++A +++++  L++RG+SLPLL+CL PE                        GL           
Subjt:  MEIGAPESSWMDPITDF-IRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPE-----------------------EGL-----------

Query:  --------------------------------------------VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHL
                                                    VE++   TN + LL+NLDLL E+R+ +QLRLAEY  RMA +YNARV+ R F+ G L
Subjt:  --------------------------------------------VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHL

Query:  VLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYY
        VL++V  HV AL P WEGP+ +  ++RP  Y+   L G  L HPWNAEHL+ YY
Subjt:  VLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]2.6e-3971.17Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP
        +E YEP  NE  LLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FE+KG+VRPGTY+LADL+  VLAHP
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1DP99 uncharacterized protein K02A2.6-like8.8e-3368Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP
        VE+YE   NE+ LLL LDL++E+R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KG+VRPGTY+LADL+G +L+HP
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP

A0A6J1DP99 uncharacterized protein K02A2.6-like3.4e-0855.56Show/hide
Query:  MDPITDFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG
        MDPI DF+ G    D KE +++AR+ AR+++R+G LYR GFSLPLLKC+  E+G
Subjt:  MDPITDFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG

A0A6J1DP99 uncharacterized protein K02A2.6-like1.4e-3058.18Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP
        VE+++   N + LL+NLDLLEE+R+ +QLRLAEYQ RMAR+YNARV+ R F+   LVL++V  HVGAL+P WEGP+ +  ++RP  Y+L+DL G  L HP
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP

Query:  WNAEHLKRYY
        WNAEHL+ YY
Subjt:  WNAEHLKRYY

A0A6J1DUF4 uncharacterized protein LOC1110232034.0e-3334.65Show/hide
Query:  MEIGAPESSWMDPITDF-IRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPE-----------------------EGL-----------
        M++   + +WMD I +F + G+ P DP + RKL  ++A +++++  L++RG+SLPLL+CL PE                        GL           
Subjt:  MEIGAPESSWMDPITDF-IRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPE-----------------------EGL-----------

Query:  --------------------------------------------VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHL
                                                    VE++   TN + LL+NLDLL E+R+ +QLRLAEY  RMA +YNARV+ R F+ G L
Subjt:  --------------------------------------------VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHL

Query:  VLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYY
        VL++V  HV AL P WEGP+ +  ++RP  Y+   L G  L HPWNAEHL+ YY
Subjt:  VLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYY

A0A6J1DWM2 Ribonuclease H2.5e-1153.12Show/hide
Query:  MEIGAPESSWMDPITDF-IRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEE
        MEI + + +WMDPI DF + G+ P DP + RKL R+AA +++++G L++RG+SLPLL+CL PEE
Subjt:  MEIGAPESSWMDPITDF-IRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEE

A0A6J1DXL9 uncharacterized protein LOC1110254481.3e-3971.17Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP
        +E YEP  NE  LLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FE+KG+VRPGTY+LADL+  VLAHP
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP

A0A7J0F4U0 Uncharacterized protein2.1e-3443.69Show/hide
Query:  SWMDPITDFIR-GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG--LVEHY---------EP----------------------TTN
        +W+D I D++R G  P+D  + R+L  R+ARF + +G LY+R FS PLL+CL PEE   + E Y         EP                        N
Subjt:  SWMDPITDFIR-GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEG--LVEHY---------EP----------------------TTN

Query:  EDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAE
        E  L LNLDLL+E+R  A+LR A Y+GR+A++YN RV  R+F  G LV RRV         G L P WEGP+++  + RPGT  L DL G  L+HPWNAE
Subjt:  EDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAE

Query:  HLKRYY
        HLK+YY
Subjt:  HLKRYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATCACGGACTTCATTAGGGGTAACTCACCACAAGATCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGGTTCGTGGTCCGAGATGGTGCATTGTACCGACGCGGCTTTTCCCTGCCTCTGTTGAAATGCCTAACCCCGGAAGAGGGCCTAGTAGAGCATTATGAGCCTACGACGA
ATGAGGATGGGCTGCTCCTCAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGC
GTCCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGACCCGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCATGGT
CCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTCAAATGACAAAAAGATTTTCA
ATGCACCTGTAAAGGCTGTTCCAAAGGAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATCACGGACTTCATTAGGGGTAACTCACCACAAGATCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGGTTCGTGGTCCGAGATGGTGCATTGTACCGACGCGGCTTTTCCCTGCCTCTGTTGAAATGCCTAACCCCGGAAGAGGGCCTAGTAGAGCATTATGAGCCTACGACGA
ATGAGGATGGGCTGCTCCTCAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGC
GTCCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGACCCGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCATGGT
CCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTCAAATGACAAAAAGATTTTCA
ATGCACCTGTAAAGGCTGTTCCAAAGGAATTATGA
Protein sequenceShow/hide protein sequence
MEIGAPESSWMDPITDFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLKCLTPEEGLVEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNAR
VRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGMVRPGTYILADLKGDVLAHPWNAEHLKRYYPSNDKKIFNAPVKAVPKEL