| GenBank top hits | e value | %identity | Alignment |
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| KAA3473721.1 retroelement pol polyprotein-like [Gossypium australe] | 5.2e-20 | 35.65 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALP---------------------------H
+E+L++ YM KNDALIQSQAATL+N+E Q+GQ+A EL+NR Q LP D ENP+ G E C+ALTL S K +
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALP---------------------------H
Query: PYPSLMQEDNVIHA-----------------------ILIGKFPQKMGDQGNFTIPVSIGGKNL---ADRSITHPGGRPFLSTGRALTDVHNGELTVRVN
P P + D V + K P K+ D G FTIP +IG D+ + GRPFL+TGR + DV GELT+RV
Subjt: PYPSLMQEDNVIHA-----------------------ILIGKFPQKMGDQGNFTIPVSIGGKNL---ADRSITHPGGRPFLSTGRALTDVHNGELTVRVN
Query: DQQLEGTVEGQTAIRD
Q + + +I +
Subjt: DQQLEGTVEGQTAIRD
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| XP_022157917.1 uncharacterized protein LOC111024527 [Momordica charantia] | 4.4e-19 | 37.57 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQ
+E LM+ YM ND ++QSQAA+LRN+E+Q+GQ+A +LK+RPQ + +E ++ N + + K Y ++ ILI K P KM D
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQ
Query: GNFTIPVSIGGKNLA--------------------------DRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTV
G+FTIPVSIGG+ + D+ ++ GRPFL T R L DVH GELT+RV DQ+++ +V
Subjt: GNFTIPVSIGGKNLA--------------------------DRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTV
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| XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa] | 6.8e-20 | 37.61 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGK-------ALPHPYPSLMQEDNVIH---AILI
+E+LMRDYMTKNDA+IQSQAA+LRN+EVQLGQ+A +LKNRPQ LP D ENP+++G E C+A+TL SGK A PS +Q++ + AI I
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGK-------ALPHPYPSLMQEDNVIH---AILI
Query: G-KFP--------------------------QKMGDQGNF------------TIP-----------------VSIGGKNLAD----------RSITHPGG
KFP +K D G F IP + + L + R + G
Subjt: G-KFP--------------------------QKMGDQGNF------------TIP-----------------VSIGGKNLAD----------RSITHPGG
Query: RPFLSTGRALTDVHNGELTVRVNDQQ
RPFL+TGR L DV GELT+R D+Q
Subjt: RPFLSTGRALTDVHNGELTVRVNDQQ
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| XP_030505184.1 uncharacterized protein LOC115720166 [Cannabis sativa] | 1.1e-17 | 27.15 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKAL-----------------------------
+E+LMRDYM KNDA+IQSQAA LRN+E+QLG +A ELK RPQ LP D ENP+++G EQC+++ L SGK L
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKAL-----------------------------
Query: -----------------------------PHPYP------------------------------SLMQEDNVI------------------------HAI
P P+P +L Q N + A+
Subjt: -----------------------------PHPYP------------------------------SLMQEDNVI------------------------HAI
Query: LIGKFPQKMGDQGNFTIPVSIGGKN--------------LADRSITHPGG----------------------------------RPFLSTGRALTDVHNG
L K P K+ D G+FTIP+SIGG++ LADRS+ HP G RPFL+TGR L DV G
Subjt: LIGKFPQKMGDQGNFTIPVSIGGKN--------------LADRSITHPGG----------------------------------RPFLSTGRALTDVHNG
Query: ELTVRVNDQQLEGTVEGQTAIRDAFPDEQLLVVIENKKDLEPCALSFSFISALGSLQHRQFVSIVIPICLGLKRKQGRVRKLSP-QDLTPSLSPKKSPEK
ELT+R D+Q V DA E L + D++P ++ +F + +VRK P +++T P++ +K
Subjt: ELTVRVNDQQLEGTVEGQTAIRDAFPDEQLLVVIENKKDLEPCALSFSFISALGSLQHRQFVSIVIPICLGLKRKQGRVRKLSP-QDLTPSLSPKKSPEK
Query: ALEKSPPNLTRYPKKPTQKKKSLPRLRRNWQ
AL PK+P +KK+ +L R +Q
Subjt: ALEKSPPNLTRYPKKPTQKKKSLPRLRRNWQ
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| XP_030505532.1 uncharacterized protein LOC115720524 [Cannabis sativa] | 2.4e-17 | 29.84 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGK------------------------AL-----
+E+LMRDYM K DA+IQSQ A+LRN+E+QLG +A ELK RPQ LP D +NP+++G EQC+++ L SGK AL
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGK------------------------AL-----
Query: --PHPYP------------------------------SLMQEDNVI-------------------------HAILIGKFPQKMGDQGNFTIPVSIGGKN-
P P+P +L Q N + +A+L K P K+ D G+FTIP SI G++
Subjt: --PHPYP------------------------------SLMQEDNVI-------------------------HAILIGKFPQKMGDQGNFTIPVSIGGKN-
Query: -----------------------------------LADRSITHPG----------------------------------GRPFLSTGRALTDVHNGELTV
LADRS+ HP GRPFL+TGR+L DV NGELT+
Subjt: -----------------------------------LADRSITHPG----------------------------------GRPFLSTGRALTDVHNGELTV
Query: RVNDQ
RVND+
Subjt: RVNDQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5B6VKQ8 Retrovirus-related Pol polyprotein from transposon 17.6 | 7.6e-17 | 35.11 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALPHPY-PSLMQEDNVIHAILIGKFPQ----
MEAL+++YM KND +IQSQA +LR +E Q+GQ++ L +R Q LP D +N + +G E C+A+T SG LP ++++ED++ PQ
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALPHPY-PSLMQEDNVIHAILIGKFPQ----
Query: --------KMGDQGNFTIPVSIGGKNLADRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTVEGQTAIRDAFPDEQLLVVIE
+M + F + + L + I PFL+TGR L D+ GELT+RVNDQQ V D D Q + +++
Subjt: --------KMGDQGNFTIPVSIGGKNLADRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTVEGQTAIRDAFPDEQLLVVIE
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| A0A5B6VWJ0 Retroelement pol polyprotein-like | 2.5e-20 | 35.65 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALP---------------------------H
+E+L++ YM KNDALIQSQAATL+N+E Q+GQ+A EL+NR Q LP D ENP+ G E C+ALTL S K +
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALP---------------------------H
Query: PYPSLMQEDNVIHA-----------------------ILIGKFPQKMGDQGNFTIPVSIGGKNL---ADRSITHPGGRPFLSTGRALTDVHNGELTVRVN
P P + D V + K P K+ D G FTIP +IG D+ + GRPFL+TGR + DV GELT+RV
Subjt: PYPSLMQEDNVIHA-----------------------ILIGKFPQKMGDQGNFTIPVSIGGKNL---ADRSITHPGGRPFLSTGRALTDVHNGELTVRVN
Query: DQQLEGTVEGQTAIRD
Q + + +I +
Subjt: DQQLEGTVEGQTAIRD
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| A0A6J1DVS9 uncharacterized protein LOC111024527 | 2.1e-19 | 37.57 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQ
+E LM+ YM ND ++QSQAA+LRN+E+Q+GQ+A +LK+RPQ + +E ++ N + + K Y ++ ILI K P KM D
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQCQALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQ
Query: GNFTIPVSIGGKNLA--------------------------DRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTV
G+FTIPVSIGG+ + D+ ++ GRPFL T R L DVH GELT+RV DQ+++ +V
Subjt: GNFTIPVSIGGKNLA--------------------------DRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTV
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| A0A6J1DWK1 uncharacterized protein LOC111025053 | 3.2e-15 | 45.83 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRP-QRLPCDIENPKKEGNEQCQALTLHSGKALP--HP-YPSLMQEDNVIHAILIGKFPQKM
+E +M+ YM NDA +QSQAA+LRN+E+Q+GQ+A++LK+RP LP D E PK++ EQC ALTL SGKALP HP P+L +E A ++ PQ
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRP-QRLPCDIENPKKEGNEQCQALTLHSGKALP--HP-YPSLMQEDNVIHAILIGKFPQKM
Query: GDQGNFTIPVSIGGKNLADR
D + V I + +A++
Subjt: GDQGNFTIPVSIGGKNLADR
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| A0A6J1GJ68 uncharacterized protein LOC111454344 | 7.1e-15 | 59.72 | Show/hide |
Query: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRP-QRLPCDIENPKKEGNEQCQALTLHSGKALP
+E+L+++YM KND +IQSQ A+L+N+EVQ+GQ+A EL+NRP +LP D E PK+EG EQCQA+ L SGK +P
Subjt: MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRP-QRLPCDIENPKKEGNEQCQALTLHSGKALP
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