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Moc10g14680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:11163923..11166871
RNA-Seq ExpressionMoc10g14680
SyntenyMoc10g14680
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131678.1 uncharacterized protein LOC111004795 [Momordica charantia]7.0e-1371.19Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM
        +DQL  FSKYE  QIPR+QNVNA+ALA+L A  ET LGRTVPVEILPEPSI+ Q+ MD+
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM

XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]6.1e-1779.37Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG
        R+QL QFSKYEIRQIPR QNVNADALA+L   YETDLGRTVPVEIL  PSIEAQEAMD+ ++G
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]6.5e-1982.54Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG
        R+QL QFSKYEI QIPR QNV+ADALA+L A YETDLGRTVPVEILPEPSIEAQEAMD+ N+G
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]6.8e-0868Show/hide
Query:  LSEAADRLGETSPSSDHRLNPTIPDRGEPAKEVESIPLTAEDRRVNIGTR
        L +A D  G+  PS  HRLN T  DRGEPA+EVES+PLTAEDRRVNIGT+
Subjt:  LSEAADRLGETSPSSDHRLNPTIPDRGEPAKEVESIPLTAEDRRVNIGTR

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]4.2e-1880.95Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG
        R+QL QFSKYEIRQIP  QNVNAD LA+L  AYETDLGRTVPVEILP PSIEAQEAMD+ N+G
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]3.3e-1579.66Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM
        +DQLGQFSK+EIRQIP TQNVNADALA+L AAY TDLGRT+ VEIL EPSI+AQE MD+
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM

TrEMBL top hitse value%identityAlignment
A0A6J1BU48 uncharacterized protein LOC1110047953.4e-1371.19Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM
        +DQL  FSKYE  QIPR+QNVNA+ALA+L A  ET LGRTVPVEILPEPSI+ Q+ MD+
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM

A0A6J1DJC7 Ribonuclease H3.0e-1779.37Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG
        R+QL QFSKYEIRQIPR QNVNADALA+L   YETDLGRTVPVEIL  PSIEAQEAMD+ ++G
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG

A0A6J1DVC6 Ribonuclease H7.0e-1982.54Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG
        R+QL QFSKYEI QIPR QNV+ADALA+L A YETDLGRTVPVEILPEPSIEAQEAMD+ N+G
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG

A0A6J1DVC6 Ribonuclease H3.3e-0868Show/hide
Query:  LSEAADRLGETSPSSDHRLNPTIPDRGEPAKEVESIPLTAEDRRVNIGTR
        L +A D  G+  PS  HRLN T  DRGEPA+EVES+PLTAEDRRVNIGT+
Subjt:  LSEAADRLGETSPSSDHRLNPTIPDRGEPAKEVESIPLTAEDRRVNIGTR

A0A6J1DVC6 Ribonuclease H2.0e-1880.95Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG
        R+QL QFSKYEIRQIP  QNVNAD LA+L  AYETDLGRTVPVEILP PSIEAQEAMD+ N+G
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKG

A0A6J1E1Q5 uncharacterized protein LOC1110256231.6e-1579.66Show/hide
Query:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM
        +DQLGQFSK+EIRQIP TQNVNADALA+L AAY TDLGRT+ VEIL EPSI+AQE MD+
Subjt:  RDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCCGAGTCCTTGATAATCAAGCTTGGTGCGAACCTCAGGAGGAACCGGGAGAGCATAATCCACGTATCAACAATTGGCGCCGTCTGTGGGGATGATACAGTCCG
AACAAGCTTAGCCGAGGCGAAGCCCAGATCTGAGGCGGGTAGAATGGAGCAAATCGACACGAGCCCTGGTGGAAGCCAGCAACGTTTCGAAAAGAAGAGCCTGAGCGAGG
CTGCCGACCGCTTGGGGGAGACAAGTCCGAGCTCTGATCATCGACTAAATCCTACCATCCCCGATAGGGGAGAACCGGCTAAGGAGGTAGAATCTATCCCTCTAACAGCC
GAGGATCGACGAGTCAATATCGGAACCAGAGATCAGCTCGGCCAGTTCTCAAAATATGAGATTCGACAAATTCCTCGTACTCAAAACGTCAACGCAGATGCGTTAGCTCA
ACTAGATGCTGCTTATGAAACCGACCTAGGAAGGACTGTGCCGGTCGAGATTTTGCCCGAGCCCAGCATAGAAGCTCAGGAAGCAATGGATATGACGAACAAGGGCAACC
AGAAGAGAACTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCCGAGTCCTTGATAATCAAGCTTGGTGCGAACCTCAGGAGGAACCGGGAGAGCATAATCCACGTATCAACAATTGGCGCCGTCTGTGGGGATGATACAGTCCG
AACAAGCTTAGCCGAGGCGAAGCCCAGATCTGAGGCGGGTAGAATGGAGCAAATCGACACGAGCCCTGGTGGAAGCCAGCAACGTTTCGAAAAGAAGAGCCTGAGCGAGG
CTGCCGACCGCTTGGGGGAGACAAGTCCGAGCTCTGATCATCGACTAAATCCTACCATCCCCGATAGGGGAGAACCGGCTAAGGAGGTAGAATCTATCCCTCTAACAGCC
GAGGATCGACGAGTCAATATCGGAACCAGAGATCAGCTCGGCCAGTTCTCAAAATATGAGATTCGACAAATTCCTCGTACTCAAAACGTCAACGCAGATGCGTTAGCTCA
ACTAGATGCTGCTTATGAAACCGACCTAGGAAGGACTGTGCCGGTCGAGATTTTGCCCGAGCCCAGCATAGAAGCTCAGGAAGCAATGGATATGACGAACAAGGGCAACC
AGAAGAGAACTGGATGA
Protein sequenceShow/hide protein sequence
MVSESLIIKLGANLRRNRESIIHVSTIGAVCGDDTVRTSLAEAKPRSEAGRMEQIDTSPGGSQQRFEKKSLSEAADRLGETSPSSDHRLNPTIPDRGEPAKEVESIPLTA
EDRRVNIGTRDQLGQFSKYEIRQIPRTQNVNADALAQLDAAYETDLGRTVPVEILPEPSIEAQEAMDMTNKGNQKRTG