; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g14830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:11271320..11273084
RNA-Seq ExpressionMoc10g14830
SyntenyMoc10g14830
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79660.1 hypothetical protein VITISV_004324 [Vitis vinifera]6.6e-0637.33Show/hide
Query:  RNLLGEEILLEDKDDLPIPNLTFPSHPLLSPVLNPNPSQVLN--PTEILGPSNPLA--------IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPY
        ++ L  E  +EDK+    P+LT P H   +  L  +P   L   P E +     +           PL+VYSRR  +   ES H + T   +K   ++  
Subjt:  RNLLGEEILLEDKDDLPIPNLTFPSHPLLSPVLNPNPSQVLN--PTEILGPSNPLA--------IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPY

Query:  ITISANNE-SDIDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL
         TIS  N+ S++DLPI LRK KR CT++ LS+FVS++ LSS YR+FV  L
Subjt:  ITISANNE-SDIDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL

RVW30881.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.5e-0533.08Show/hide
Query:  PIPNLTFPSHPLLSPVLNPNPSQVLNPTEILGPSNPLA-IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANN---------ESDIDLPIA
        PIP++  P  P ++P      +    PT     S   A  + L VYSRR   + +  +H     I+E+     P     +N+          +D+ +PIA
Subjt:  PIPNLTFPSHPLLSPVLNPNPSQVLNPTEILGPSNPLA-IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANN---------ESDIDLPIA

Query:  LRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL
        LRK  R+CT++ +S+F+SYD+LSS+Y +FV NL
Subjt:  LRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL

TYK01384.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]1.9e-0533.8Show/hide
Query:  LNPNPSQV--LNPTEILGPSNPLAIVPLQVYSRRNTEQVQ-------------ESEHISRTEIV------EKRFNDEPYITI-SANNESD----------
        + P PS V  ++P  I+ P+N    VP + Y RRN +  +             +S   SR+++       EK   DE  + I ++NNE++          
Subjt:  LNPNPSQV--LNPTEILGPSNPLAIVPLQVYSRRNTEQVQ-------------ESEHISRTEIV------EKRFNDEPYITI-SANNESD----------

Query:  ---IDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL
           +DLPIALRK  R+CT+YS+S++VSY+ LS Q R+F  +L
Subjt:  ---IDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL

XP_027072218.1 uncharacterized protein LOC113697007 isoform X1 [Coffea arabica]1.9e-0541.59Show/hide
Query:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD
        SP + P PS +L   E+ G    +  L+   LQVYSRR+   V+++  + RT  +  + +D P +T S  +    DLPIALRK KR CT + +S+FVSY 
Subjt:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD

Query:  KLSSQYRSFVVNL
        +LS  Y SFV +L
Subjt:  KLSSQYRSFVVNL

XP_027080654.1 uncharacterized protein LOC113703474 [Coffea arabica]1.9e-0541.59Show/hide
Query:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD
        SP + P PS +L   E+ G    +  L+   LQVYSRR+   V+++  + RT  +  + +D P +T S  +    DLPIALRK KR CT + +S+FVSY 
Subjt:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD

Query:  KLSSQYRSFVVNL
        +LS  Y SFV +L
Subjt:  KLSSQYRSFVVNL

TrEMBL top hitse value%identityAlignment
A0A438D633 Retrovirus-related Pol polyprotein from transposon TNT 1-947.1e-0633.08Show/hide
Query:  PIPNLTFPSHPLLSPVLNPNPSQVLNPTEILGPSNPLA-IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANN---------ESDIDLPIA
        PIP++  P  P ++P      +    PT     S   A  + L VYSRR   + +  +H     I+E+     P     +N+          +D+ +PIA
Subjt:  PIPNLTFPSHPLLSPVLNPNPSQVLNPTEILGPSNPLA-IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANN---------ESDIDLPIA

Query:  LRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL
        LRK  R+CT++ +S+F+SYD+LSS+Y +FV NL
Subjt:  LRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL

A0A5D3BQE1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 89.2e-0633.8Show/hide
Query:  LNPNPSQV--LNPTEILGPSNPLAIVPLQVYSRRNTEQVQ-------------ESEHISRTEIV------EKRFNDEPYITI-SANNESD----------
        + P PS V  ++P  I+ P+N    VP + Y RRN +  +             +S   SR+++       EK   DE  + I ++NNE++          
Subjt:  LNPNPSQV--LNPTEILGPSNPLAIVPLQVYSRRNTEQVQ-------------ESEHISRTEIV------EKRFNDEPYITI-SANNESD----------

Query:  ---IDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL
           +DLPIALRK  R+CT+YS+S++VSY+ LS Q R+F  +L
Subjt:  ---IDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL

A0A6P6T1M1 uncharacterized protein LOC113697007 isoform X19.2e-0641.59Show/hide
Query:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD
        SP + P PS +L   E+ G    +  L+   LQVYSRR+   V+++  + RT  +  + +D P +T S  +    DLPIALRK KR CT + +S+FVSY 
Subjt:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD

Query:  KLSSQYRSFVVNL
        +LS  Y SFV +L
Subjt:  KLSSQYRSFVVNL

A0A6P6TQB4 uncharacterized protein LOC1137034749.2e-0641.59Show/hide
Query:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD
        SP + P PS +L   E+ G    +  L+   LQVYSRR+   V+++  + RT  +  + +D P +T S  +    DLPIALRK KR CT + +S+FVSY 
Subjt:  SPVLNPNPSQVLNPTEILG---PSNPLAIVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYD

Query:  KLSSQYRSFVVNL
        +LS  Y SFV +L
Subjt:  KLSSQYRSFVVNL

A5C483 Reverse transcriptase Ty1/copia-type domain-containing protein3.2e-0637.33Show/hide
Query:  RNLLGEEILLEDKDDLPIPNLTFPSHPLLSPVLNPNPSQVLN--PTEILGPSNPLA--------IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPY
        ++ L  E  +EDK+    P+LT P H   +  L  +P   L   P E +     +           PL+VYSRR  +   ES H + T   +K   ++  
Subjt:  RNLLGEEILLEDKDDLPIPNLTFPSHPLLSPVLNPNPSQVLN--PTEILGPSNPLA--------IVPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPY

Query:  ITISANNE-SDIDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL
         TIS  N+ S++DLPI LRK KR CT++ LS+FVS++ LSS YR+FV  L
Subjt:  ITISANNE-SDIDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCAATTTTTATTTCATTGTGGGAGTTCACATTGTGGGTTCTGGTTCGAAAGGCGTTCGCAAGACTTATGCTGTTTTGGTCACAAGTGTTCTTGTTAGAACTAA
AACAATGAAAAGACGATTGGACTTGCTAAAGAAAAAAATGGTCTTTATTATCTTGAGGAACCTACTGGGGGAGGAAATATTGTTGGAAGATAAGGATGATTTACCCATCC
CTAACCTCACATTTCCTTCACACCCTTTACTATCACCAGTACTAAACCCAAATCCATCACAAGTACTAAACCCCACTGAAATTCTAGGGCCATCTAACCCTCTTGCTATT
GTACCGTTACAGGTTTATTCAAGAAGGAACACTGAGCAAGTCCAAGAGTCTGAACATATATCTAGAACTGAAATTGTCGAGAAAAGATTCAATGATGAACCATACATTAC
AATATCCGCTAATAATGAATCAGATATAGATTTGCCTATCGCCTTGAGGAAACGAAAACGAACTTGCACTCGGTATTCATTGTCACACTTTGTATCCTATGACAAACTCT
CAAGTCAGTATAGAAGCTTTGTGGTTAACCTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCAATTTTTATTTCATTGTGGGAGTTCACATTGTGGGTTCTGGTTCGAAAGGCGTTCGCAAGACTTATGCTGTTTTGGTCACAAGTGTTCTTGTTAGAACTAA
AACAATGAAAAGACGATTGGACTTGCTAAAGAAAAAAATGGTCTTTATTATCTTGAGGAACCTACTGGGGGAGGAAATATTGTTGGAAGATAAGGATGATTTACCCATCC
CTAACCTCACATTTCCTTCACACCCTTTACTATCACCAGTACTAAACCCAAATCCATCACAAGTACTAAACCCCACTGAAATTCTAGGGCCATCTAACCCTCTTGCTATT
GTACCGTTACAGGTTTATTCAAGAAGGAACACTGAGCAAGTCCAAGAGTCTGAACATATATCTAGAACTGAAATTGTCGAGAAAAGATTCAATGATGAACCATACATTAC
AATATCCGCTAATAATGAATCAGATATAGATTTGCCTATCGCCTTGAGGAAACGAAAACGAACTTGCACTCGGTATTCATTGTCACACTTTGTATCCTATGACAAACTCT
CAAGTCAGTATAGAAGCTTTGTGGTTAACCTTAAATAA
Protein sequenceShow/hide protein sequence
MDANFYFIVGVHIVGSGSKGVRKTYAVLVTSVLVRTKTMKRRLDLLKKKMVFIILRNLLGEEILLEDKDDLPIPNLTFPSHPLLSPVLNPNPSQVLNPTEILGPSNPLAI
VPLQVYSRRNTEQVQESEHISRTEIVEKRFNDEPYITISANNESDIDLPIALRKRKRTCTRYSLSHFVSYDKLSSQYRSFVVNLK