; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g14880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr10:11324015..11326466
RNA-Seq ExpressionMoc10g14880
SyntenyMoc10g14880
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006413 - translational initiation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR016197 - Chromo-like domain superfamily
IPR021109 - Aspartic peptidase domain superfamily
IPR023780 - Chromo domain
IPR041373 - Reverse transcriptase, RNase H-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042379.1 reverse transcriptase [Cucumis melo var. makuwa]7.1e-1753.12Show/hide
Query:  LIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT
        +IHV+NLK Y  DT D  RN +T P + L+   DK+VE ILAER RR  RP R + E+LV WK L  EE SWER EDL+     IE+F+ ++LTGT
Subjt:  LIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT

KAA0042379.1 reverse transcriptase [Cucumis melo var. makuwa]3.9e-5567.97Show/hide
Query:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII
        QYLLG+ FVVKTDNS+ CHFF QPKL SKQARWQE+LAEFDF+FEHK G +NQA D LSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D  AQ ++
Subjt:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII

Query:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ
         LA  GKTRQFWV+ DLL TKGNRLYVP +GNLRK LL ECHDT+W G  G Q
Subjt:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ

KAA0060055.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-1932.45Show/hide
Query:  HFFNQPKLLSKQARWQEYL--AEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAI---KKNLQNDPVAQVIIQLANEGKTRQFWV
        HF N+     +Q  W + L  A+F F  +          + +SR+       +L HL      G   +A+   K+  Q + +A+  ++ A+  K  + W 
Subjt:  HFFNQPKLLSKQARWQEYL--AEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAI---KKNLQNDPVAQVIIQLANEGKTRQFWV

Query:  ---KNDLLFTKGNRLYV---PHSGNLRKLLLGECHDTMWTGQAGDQGVLRIPGRRS------------RLIHVNNLKSYPPDTVDPTRNEITRPAVTLTN
           +  L F  G+++ +   P     R    G     +     G   VL+  G  S             +IHV+NLK Y  DT D  RN +TRP + L+ 
Subjt:  ---KNDLLFTKGNRLYV---PHSGNLRKLLLGECHDTMWTGQAGDQGVLRIPGRRS------------RLIHVNNLKSYPPDTVDPTRNEITRPAVTLTN

Query:  KVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT
        K DK+VE ILAER RR  RP R + E+LV WK LP EE SWER EDL+     I++F+ ++LTGT
Subjt:  KVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT

TYK08407.1 reverse transcriptase [Cucumis melo var. makuwa]1.7e-5829.21Show/hide
Query:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE
        + KR +++LG WSG VDFV+V++ DFD+VLGMEFLLEH+VI MPLAKCLVITGS P V Q  ++QP G+KMISA+QLKKGL+ DEP FMAIP+    NS 
Subjt:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE

Query:  EPVPREIQRVLNV---------------------------------------------------------------------------------------
        E VP+EI RVL                                                                                         
Subjt:  EPVPREIQRVLNV---------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHK
                                                             QYLLG+ FVVKTDNS+ CHFF QPKL SKQARWQE+LAEFDF+FEHK
Subjt:  -----------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHK

Query:  PGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWT
         G +NQA D LSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D  AQ ++ LA  GKTRQFWV+ DLL TKGNRLYVP +G LRK LL ECHDT+W 
Subjt:  PGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWT

Query:  GQAGDQ
        G  G Q
Subjt:  GQAGDQ

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]5.5e-8638.39Show/hide
Query:  MRVAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGN
        M VAKRVSVKLGTWSG VDFVIVRM DFD+VLG++FLLEHKVIPMPLAKCLV+T SDPIV QTSIKQPSGVKMISALQLKKG+A DEP FMAIPV EG N
Subjt:  MRVAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGN

Query:  SEEPVPREIQRVLNV-------------------------------------------------------------------------------------
        SEE VPREIQRVL                                                                                       
Subjt:  SEEPVPREIQRVLNV-------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEH
                                                              QYLLGAKFVVKTDNSSVCHFFNQPKL SKQARWQEYLAEFDFQFEH
Subjt:  ------------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEH

Query:  KPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMW
        KPGRANQA D LSRKSE AALCMLAHLKASKL GSIREAI++NLQNDP AQ IIQLANEG TRQF V+NDL FTKGN LYVP SGNLRKLLLGECHDTMW
Subjt:  KPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMW

Query:  TGQAGDQ
         G AG Q
Subjt:  TGQAGDQ

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]2.9e-5843.25Show/hide
Query:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII
        QYLLG++FVVKTDNS+ CHFF+QPKL +KQARWQE LAEFDF+FEHK G++NQA D LSRK EHAALCMLAH+ +SK+ GS+R+ IK++L  DP A+ ++
Subjt:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII

Query:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQGVLRI-------PGRRSRLI-HVNNLKSYPPDTVD------------
        +LA  GKTRQFWV+ DLL TKGNRLYVP +G LRK L+ ECHDT+W G  G Q    +       P  R  ++ +         D V+            
Subjt:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQGVLRI-------PGRRSRLI-HVNNLKSYPPDTVD------------

Query:  -PTR--NEITRPAVTLTNKVD-----------------------------------KEV-------ESILAERTRR-VGRPRRDVQEFLVNWKGLPDEEI
         PTR    ++   +T   KV                                    K V        SI+++R  R +G    ++  FL     +  +E 
Subjt:  -PTR--NEITRPAVTLTNKVD-----------------------------------KEV-------ESILAERTRR-VGRPRRDVQEFLVNWKGLPDEEI

Query:  SWERTEDLKTAATAIEEFEQQRLTGT
        SWER EDL +AAT I  +E  RLTGT
Subjt:  SWERTEDLKTAATAIEEFEQQRLTGT

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]3.5e-3264.29Show/hide
Query:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE
        V+K V  K+G W+G++D V+VRM DFD+VLGMEFLLEHKVIPMPLAKCLVIT  +P V   SIKQP  ++MISA+QLK+GLA +EP FMAIP++E   +E
Subjt:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE

Query:  EPVPREIQRVLN
        E VP EI+ VL+
Subjt:  EPVPREIQRVLN

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]2.9e-5831.6Show/hide
Query:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE
        + KR  ++LG WSG VDFV+V+M DFD+VLGMEFLLEH+VIPMPLAKCLVITG  P V QT ++QP G+KMISA+QLKKGL+ DEP FMAIP+    NS 
Subjt:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE

Query:  EPVPREIQRVLN----------VQYL-----------------------------------------------------------LGAKFVVKTDNSSVC
        E VP+EI RVL            +YL                                                           L   F +   +++ C
Subjt:  EPVPREIQRVLN----------VQYL-----------------------------------------------------------LGAKFVVKTDNSSVC

Query:  HFFNQ-----------------------------------------------------------------------------------------------
           NQ                                                                                               
Subjt:  HFFNQ-----------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKN
                PKL SKQARWQE++AEFDF+FEHK G +NQA DTLSRK EHAA+C+LAHL+ SK+ GSIR+ +++ LQ D VAQ ++ L   GKTRQFWV+ 
Subjt:  --------PKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKN

Query:  DLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ
        DLL TKGNRLYVP +G+LRK LL ECHDT+W G  G Q
Subjt:  DLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ

TrEMBL top hitse value%identityAlignment
A0A5A7T9P9 Reverse transcriptase1.1e-3468.47Show/hide
Query:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE
        + KR  ++LG WSG VDFV+V+M DFD+VLGMEFLLEH+VIPMPLAKCLVITG  P V QT ++QP G+KMISA+QLKKGL+ DEP FMAIP+    NS 
Subjt:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE

Query:  EPVPREIQRVL
        E VP+EI RVL
Subjt:  EPVPREIQRVL

A0A5A7T9P9 Reverse transcriptase5.3e-1854.17Show/hide
Query:  LIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT
        +IHV+NLK Y  DT D  +N +TRP + L+ K DK+VE I AER RR  RP R + E+LV WK LP EE SWER EDL+     IE+F+ ++LTGT
Subjt:  LIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT

A0A5A7V2E6 Reverse transcriptase7.4e-2032.45Show/hide
Query:  HFFNQPKLLSKQARWQEYL--AEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAI---KKNLQNDPVAQVIIQLANEGKTRQFWV
        HF N+     +Q  W + L  A+F F  +          + +SR+       +L HL      G   +A+   K+  Q + +A+  ++ A+  K  + W 
Subjt:  HFFNQPKLLSKQARWQEYL--AEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAI---KKNLQNDPVAQVIIQLANEGKTRQFWV

Query:  ---KNDLLFTKGNRLYV---PHSGNLRKLLLGECHDTMWTGQAGDQGVLRIPGRRS------------RLIHVNNLKSYPPDTVDPTRNEITRPAVTLTN
           +  L F  G+++ +   P     R    G     +     G   VL+  G  S             +IHV+NLK Y  DT D  RN +TRP + L+ 
Subjt:  ---KNDLLFTKGNRLYV---PHSGNLRKLLLGECHDTMWTGQAGDQGVLRIPGRRS------------RLIHVNNLKSYPPDTVDPTRNEITRPAVTLTN

Query:  KVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT
        K DK+VE ILAER RR  RP R + E+LV WK LP EE SWER EDL+     I++F+ ++LTGT
Subjt:  KVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT

A0A5A7V2E6 Reverse transcriptase2.4e-5567.97Show/hide
Query:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII
        QYLLG+ FVVKTDNS+ CHFF QPKL SKQARWQE+LAEFDF+FEHK G +NQA D LSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D VAQ ++
Subjt:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII

Query:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ
         LA  GKTRQFWV+ DLL TKGNRLYVP +G+LRK LL ECHDT+W G  G Q
Subjt:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ

A0A5D3C8W7 Reverse transcriptase8.1e-5929.21Show/hide
Query:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE
        + KR +++LG WSG VDFV+V++ DFD+VLGMEFLLEH+VI MPLAKCLVITGS P V Q  ++QP G+KMISA+QLKKGL+ DEP FMAIP+    NS 
Subjt:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE

Query:  EPVPREIQRVLNV---------------------------------------------------------------------------------------
        E VP+EI RVL                                                                                         
Subjt:  EPVPREIQRVLNV---------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHK
                                                             QYLLG+ FVVKTDNS+ CHFF QPKL SKQARWQE+LAEFDF+FEHK
Subjt:  -----------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHK

Query:  PGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWT
         G +NQA D LSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D  AQ ++ LA  GKTRQFWV+ DLL TKGNRLYVP +G LRK LL ECHDT+W 
Subjt:  PGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWT

Query:  GQAGDQ
        G  G Q
Subjt:  GQAGDQ

A0A5D3CW71 Reverse transcriptase1.4e-5831.6Show/hide
Query:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE
        + KR  ++LG WSG VDFV+V+M DFD+VLGMEFLLEH+VIPMPLAKCLVITG  P V QT ++QP G+KMISA+QLKKGL+ DEP FMAIP+    NS 
Subjt:  VAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSE

Query:  EPVPREIQRVLN----------VQYL-----------------------------------------------------------LGAKFVVKTDNSSVC
        E VP+EI RVL            +YL                                                           L   F +   +++ C
Subjt:  EPVPREIQRVLN----------VQYL-----------------------------------------------------------LGAKFVVKTDNSSVC

Query:  HFFNQ-----------------------------------------------------------------------------------------------
           NQ                                                                                               
Subjt:  HFFNQ-----------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKN
                PKL SKQARWQE++AEFDF+FEHK G +NQA DTLSRK EHAA+C+LAHL+ SK+ GSIR+ +++ LQ D VAQ ++ L   GKTRQFWV+ 
Subjt:  --------PKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKN

Query:  DLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ
        DLL TKGNRLYVP +G+LRK LL ECHDT+W G  G Q
Subjt:  DLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ

A0A5D3CW71 Reverse transcriptase3.5e-1753.12Show/hide
Query:  LIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT
        +IHV+NLK Y  DT D  RN +T P + L+   DK+VE ILAER RR  RP R + E+LV WK L  EE SWER EDL+     IE+F+ ++LTGT
Subjt:  LIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT

A0A5D3CW71 Reverse transcriptase1.9e-5567.97Show/hide
Query:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII
        QYLLG+ FVVKTDNS+ CHFF QPKL SKQARWQE+LAEFDF+FEHK G +NQA D LSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D  AQ ++
Subjt:  QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVII

Query:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ
         LA  GKTRQFWV+ DLL TKGNRLYVP +GNLRK LL ECHDT+W G  G Q
Subjt:  QLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQ

A0A6J1DLQ6 uncharacterized protein LOC1110223202.7e-8638.39Show/hide
Query:  MRVAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGN
        M VAKRVSVKLGTWSG VDFVIVRM DFD+VLG++FLLEHKVIPMPLAKCLV+T SDPIV QTSIKQPSGVKMISALQLKKG+A DEP FMAIPV EG N
Subjt:  MRVAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGN

Query:  SEEPVPREIQRVLNV-------------------------------------------------------------------------------------
        SEE VPREIQRVL                                                                                       
Subjt:  SEEPVPREIQRVLNV-------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEH
                                                              QYLLGAKFVVKTDNSSVCHFFNQPKL SKQARWQEYLAEFDFQFEH
Subjt:  ------------------------------------------------------QYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEH

Query:  KPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMW
        KPGRANQA D LSRKSE AALCMLAHLKASKL GSIREAI++NLQNDP AQ IIQLANEG TRQF V+NDL FTKGN LYVP SGNLRKLLLGECHDTMW
Subjt:  KPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPVAQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMW

Query:  TGQAGDQ
         G AG Q
Subjt:  TGQAGDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTGCCAAGAGAGTCTCAGTAAAGCTAGGGACATGGAGTGGACAGGTTGATTTTGTGATAGTACGGATGCATGACTTCGACATCGTATTGGGAATGGAA
TTTCTGTTGGAACACAAAGTCATTCCCATGCCTCTCGCCAAGTGCCTGGTTATAACGGGTTCCGATCCCATAGTTTTTCAGACAAGCATCAAACAACCAAGCGGA
GTGAAGATGATATCAGCACTTCAACTAAAGAAGGGTCTTGCTTGTGACGAACCAATGTTCATGGCCATCCCTGTTGTGGAAGGCGGAAATTCTGAAGAGCCAGTC
CCCAGAGAAATCCAGCGAGTTTTAAATGTGCAATATCTCCTAGGGGCCAAATTCGTTGTCAAGACTGACAACAGTTCAGTCTGTCACTTCTTCAATCAACCAAAG
TTATTATCAAAACAAGCTAGATGGCAAGAATACCTTGCCGAATTTGATTTTCAGTTCGAGCATAAGCCAGGTCGAGCAAATCAAGCAGTAGATACCCTTAGTAGA
AAGAGCGAACATGCGGCCCTGTGCATGTTAGCTCACCTAAAAGCGAGCAAGCTAAAAGGATCCATTCGTGAAGCCATCAAAAAGAACTTACAGAATGACCCAGTT
GCCCAGGTGATAATTCAGTTGGCCAACGAAGGGAAGACTCGACAGTTTTGGGTCAAGAACGACCTTCTCTTCACCAAAGGTAACCGTTTGTACGTTCCCCATTCT
GGGAACCTAAGGAAGCTCCTACTTGGAGAATGTCACGACACGATGTGGACAGGCCAGGCAGGAGATCAAGGCGTACTTAGAATTCCAGGCAGGAGATCAAGGCTG
ATCCACGTGAACAACCTGAAGTCTTATCCCCCAGACACTGTCGACCCTACACGAAATGAGATAACCCGTCCAGCAGTCACGTTGACAAACAAGGTTGACAAAGAA
GTTGAGTCAATCCTCGCTGAAAGGACACGCCGAGTAGGAAGACCACGAAGGGACGTACAAGAATTCCTAGTCAACTGGAAAGGGCTCCCAGATGAAGAGATCAGT
TGGGAGCGTACTGAAGACCTGAAGACAGCTGCAACAGCGATTGAAGAGTTCGAGCAGCAACGGTTGACGGGGACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTGCCAAGAGAGTCTCAGTAAAGCTAGGGACATGGAGTGGACAGGTTGATTTTGTGATAGTACGGATGCATGACTTCGACATCGTATTGGGAATGGAA
TTTCTGTTGGAACACAAAGTCATTCCCATGCCTCTCGCCAAGTGCCTGGTTATAACGGGTTCCGATCCCATAGTTTTTCAGACAAGCATCAAACAACCAAGCGGA
GTGAAGATGATATCAGCACTTCAACTAAAGAAGGGTCTTGCTTGTGACGAACCAATGTTCATGGCCATCCCTGTTGTGGAAGGCGGAAATTCTGAAGAGCCAGTC
CCCAGAGAAATCCAGCGAGTTTTAAATGTGCAATATCTCCTAGGGGCCAAATTCGTTGTCAAGACTGACAACAGTTCAGTCTGTCACTTCTTCAATCAACCAAAG
TTATTATCAAAACAAGCTAGATGGCAAGAATACCTTGCCGAATTTGATTTTCAGTTCGAGCATAAGCCAGGTCGAGCAAATCAAGCAGTAGATACCCTTAGTAGA
AAGAGCGAACATGCGGCCCTGTGCATGTTAGCTCACCTAAAAGCGAGCAAGCTAAAAGGATCCATTCGTGAAGCCATCAAAAAGAACTTACAGAATGACCCAGTT
GCCCAGGTGATAATTCAGTTGGCCAACGAAGGGAAGACTCGACAGTTTTGGGTCAAGAACGACCTTCTCTTCACCAAAGGTAACCGTTTGTACGTTCCCCATTCT
GGGAACCTAAGGAAGCTCCTACTTGGAGAATGTCACGACACGATGTGGACAGGCCAGGCAGGAGATCAAGGCGTACTTAGAATTCCAGGCAGGAGATCAAGGCTG
ATCCACGTGAACAACCTGAAGTCTTATCCCCCAGACACTGTCGACCCTACACGAAATGAGATAACCCGTCCAGCAGTCACGTTGACAAACAAGGTTGACAAAGAA
GTTGAGTCAATCCTCGCTGAAAGGACACGCCGAGTAGGAAGACCACGAAGGGACGTACAAGAATTCCTAGTCAACTGGAAAGGGCTCCCAGATGAAGAGATCAGT
TGGGAGCGTACTGAAGACCTGAAGACAGCTGCAACAGCGATTGAAGAGTTCGAGCAGCAACGGTTGACGGGGACGTAA
Protein sequenceShow/hide protein sequence
MRVAKRVSVKLGTWSGQVDFVIVRMHDFDIVLGMEFLLEHKVIPMPLAKCLVITGSDPIVFQTSIKQPSGVKMISALQLKKGLACDEPMFMAIPVVEGGNSEEPV
PREIQRVLNVQYLLGAKFVVKTDNSSVCHFFNQPKLLSKQARWQEYLAEFDFQFEHKPGRANQAVDTLSRKSEHAALCMLAHLKASKLKGSIREAIKKNLQNDPV
AQVIIQLANEGKTRQFWVKNDLLFTKGNRLYVPHSGNLRKLLLGECHDTMWTGQAGDQGVLRIPGRRSRLIHVNNLKSYPPDTVDPTRNEITRPAVTLTNKVDKE
VESILAERTRRVGRPRRDVQEFLVNWKGLPDEEISWERTEDLKTAATAIEEFEQQRLTGT