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Moc10g14910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposon gag protein
Genome locationchr10:11336115..11341823
RNA-Seq ExpressionMoc10g14910
SyntenyMoc10g14910
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025752.1 uncharacterized protein E6C27_scaffold653G00430 [Cucumis melo var. makuwa]9.7e-3564.18Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDV--
        MK TWDDS    SESE EE+ N   M HSDK DE DDEV L+P S  ELFE FE+MQNDLEKL SKYV+LKKKYN L S+NKSLL+ IAC K+NE+ V  
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDV--

Query:  --VNISCDKHVLNCDEKNVLLDKIRFLEHHGCEK
          +N+S DKHV +C++K+ LLDK+RFLEH  CEK
Subjt:  --VNISCDKHVLNCDEKNVLLDKIRFLEHHGCEK

KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.0e-4766.26Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKN---EHD
        MK TWDDS E  SESE EE AN   M  SDK+DE DDEV L+P S +ELFE FEN+QNDLEKL SKYV+LKKKYN L SENKSLLD IAC K+N   + +
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKN---EHD

Query:  VVNISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI
         +N+S DKH+ +C+EK+ LLDK+RFLEH  CEKDNLI++LK+NE N L +LDKAK++IKKLTI
Subjt:  VVNISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]5.3e-4971.88Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDVVN
        MK TWDDSDESGSESENEEVANFCFMAHSDK+DEQDDEVNLDPLSYDELFEAFENMQN+LEKLGSKYVMLK K N   SENKSL DDIACLKKNEHDV  
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDVVN

Query:  ISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI
                                      DNLI+LLKKNES+ALVELDKAKD IK+LTI
Subjt:  ISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]6.5e-4751.24Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLG---------SKYVMLKKKYNALISENKSLLDDIA--
        MK TWDDSDESG+ESENEEVANFCFMAHSDK+DE+DDE+ LDPLSYDELFEAFENMQNDLEKL           K  +  ++ + +I   K   D     
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLG---------SKYVMLKKKYNALISENKSLLDDIA--

Query:  ----CLKKNEHDVVNISCDKHVLNCDEKNVLL----DKIRFLEHHGC------EKDNLIRLLKKNESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKE
            C   +   ++ +    ++       V+      K ++    GC      ++   +   KK+     V    +K        ERNFGDLLVSDKSKE
Subjt:  ----CLKKNEHDVVNISCDKHVLNCDEKNVLL----DKIRFLEHHGC------EKDNLIRLLKKNESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKE

Query:  IASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDLILDDPEQ
        I SSKQEV+INENKVDGFSSMPKEWKYAPSHPKDLIL DPEQ
Subjt:  IASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDLILDDPEQ

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]2.4e-4969.51Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEH----
        MK TWDDS E  SESE EE+AN   MAHSDK DE DD+V L+PLS DELFE FE+MQNDLEKL SKYV+LKKKYN LISENKSLLD IAC K+NE+    
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEH----

Query:  DVVNISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI
        + +N+S DKHV  C EK+ LLDK+RFLEH  CEKDNLI++LK+NE + L ELDKAK++IKKLTI
Subjt:  DVVNISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein4.9e-4866.26Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKN---EHD
        MK TWDDS E  SESE EE AN   M  SDK+DE DDEV L+P S +ELFE FEN+QNDLEKL SKYV+LKKKYN L SENKSLLD IAC K+N   + +
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKN---EHD

Query:  VVNISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI
         +N+S DKH+ +C+EK+ LLDK+RFLEH  CEKDNLI++LK+NE N L +LDKAK++IKKLTI
Subjt:  VVNISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI

A0A5D3C4E3 Uncharacterized protein4.7e-3564.18Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDV--
        MK TWDDS    SESE EE+ N   M HSDK DE DDEV L+P S  ELFE FE+MQNDLEKL SKYV+LKKKYN L S+NKSLL+ IAC K+NE+ V  
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDV--

Query:  --VNISCDKHVLNCDEKNVLLDKIRFLEHHGCEK
          +N+S DKHV +C++K+ LLDK+RFLEH  CEK
Subjt:  --VNISCDKHVLNCDEKNVLLDKIRFLEHHGCEK

A0A6J1DS74 uncharacterized protein LOC1110238062.6e-4971.88Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDVVN
        MK TWDDSDESGSESENEEVANFCFMAHSDK+DEQDDEVNLDPLSYDELFEAFENMQN+LEKLGSKYVMLK K N   SENKSL DDIACLKKNEHDV  
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDVVN

Query:  ISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI
                                      DNLI+LLKKNES+ALVELDKAKD IK+LTI
Subjt:  ISCDKHVLNCDEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTI

A0A6J1DY46 uncharacterized protein LOC1110252593.2e-4751.24Show/hide
Query:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLG---------SKYVMLKKKYNALISENKSLLDDIA--
        MK TWDDSDESG+ESENEEVANFCFMAHSDK+DE+DDE+ LDPLSYDELFEAFENMQNDLEKL           K  +  ++ + +I   K   D     
Subjt:  MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLG---------SKYVMLKKKYNALISENKSLLDDIA--

Query:  ----CLKKNEHDVVNISCDKHVLNCDEKNVLL----DKIRFLEHHGC------EKDNLIRLLKKNESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKE
            C   +   ++ +    ++       V+      K ++    GC      ++   +   KK+     V    +K        ERNFGDLLVSDKSKE
Subjt:  ----CLKKNEHDVVNISCDKHVLNCDEKNVLL----DKIRFLEHHGC------EKDNLIRLLKKNESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKE

Query:  IASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDLILDDPEQ
        I SSKQEV+INENKVDGFSSMPKEWKYAPSHPKDLIL DPEQ
Subjt:  IASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDLILDDPEQ

A0A6J1DYQ8 uncharacterized protein LOC1110258341.7e-3253.25Show/hide
Query:  NESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKEIASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDL--ILDDPEQ-------ECIRPEEMGKVDD
        ++ + +++L+K   S++K T    FG   +S K       K+      N+    S   ++ K  P    D+  +L+   +       ECIRPEEM KVDD
Subjt:  NESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKEIASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDL--ILDDPEQ-------ECIRPEEMGKVDD

Query:  PKYCKYHRVISHPVEKCVVLKERILNLARERKIELDFNEITQSDHIAVTTNISSQTPQSLFYNKGIYLI
        PKYCKYHRVISHPVEKC VLKERILNLARE KIELDFNEI QS+H AVTTNI SQTPQSLFYNKGI LI
Subjt:  PKYCKYHRVISHPVEKCVVLKERILNLARERKIELDFNEITQSDHIAVTTNISSQTPQSLFYNKGIYLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTACTTGGGATGATAGTGATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTGGCCAACTTTTGCTTCATGGCTCATAGTGACAAAAAGGATGAACAAGATGA
TGAGGTAAATCTTGACCCCCTTTCTTATGATGAGTTGTTTGAAGCTTTTGAGAATATGCAAAATGATTTAGAAAAACTTGGTTCTAAATATGTTATGCTTAAAAAGAAAT
ACAATGCTTTAATTAGTGAAAATAAGTCTTTACTTGATGATATTGCTTGTTTAAAGAAAAATGAGCATGATGTTGTAAATATCTCTTGTGATAAGCATGTTCTTAATTGT
GACGAGAAAAATGTCTTACTTGATAAAATTAGATTTCTTGAGCATCATGGTTGTGAAAAAGATAATCTAATTAGATTACTTAAGAAAAATGAATCAAATGCTTTAGTGGA
ACTTGATAAGGCTAAAGATTCTATTAAAAAGTTAACAATAGAAAGAAATTTTGGAGATTTACTTGTTAGTGACAAAAGCAAAGAGATTGCTTCAAGTAAGCAAGAAGTGA
ACATCAACGAAAATAAGGTGGACGGTTTTTCATCCATGCCTAAGGAGTGGAAGTATGCTCCATCCCATCCTAAGGATTTAATTCTTGATGATCCCGAACAAGAGTGTATA
CGGCCAGAAGAAATGGGTAAAGTTGATGATCCCAAATATTGCAAGTACCACCGAGTTATCAGTCATCCAGTGGAAAAGTGTGTTGTCTTAAAAGAGCGTATCCTAAATTT
AGCTCGAGAACGAAAGATTGAGTTGGATTTCAATGAAATAACTCAATCAGATCACATTGCAGTAACAACAAATATAAGCAGCCAAACACCTCAAAGTCTATTCTACAATA
AGGGTATATACTTGATCCAATTTGAAACGTTGAAGCCTATATTTGTTCTCTCTCAACCGAAGACTTCAAGAAATACCATTAAAGATGTTGTCAAATCTGTCAATCATGGA
AAGGAAGACTGGGCTATTATGACTTGTCGAAAGAAACAAAAACAAAGTTTTGCTCGAAGAAGTCACTTATGCTCATCAAAGAGCATGAACACCAAGAAAGAAGAATTCAA
GGAAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTACTTGGGATGATAGTGATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTGGCCAACTTTTGCTTCATGGCTCATAGTGACAAAAAGGATGAACAAGATGA
TGAGGTAAATCTTGACCCCCTTTCTTATGATGAGTTGTTTGAAGCTTTTGAGAATATGCAAAATGATTTAGAAAAACTTGGTTCTAAATATGTTATGCTTAAAAAGAAAT
ACAATGCTTTAATTAGTGAAAATAAGTCTTTACTTGATGATATTGCTTGTTTAAAGAAAAATGAGCATGATGTTGTAAATATCTCTTGTGATAAGCATGTTCTTAATTGT
GACGAGAAAAATGTCTTACTTGATAAAATTAGATTTCTTGAGCATCATGGTTGTGAAAAAGATAATCTAATTAGATTACTTAAGAAAAATGAATCAAATGCTTTAGTGGA
ACTTGATAAGGCTAAAGATTCTATTAAAAAGTTAACAATAGAAAGAAATTTTGGAGATTTACTTGTTAGTGACAAAAGCAAAGAGATTGCTTCAAGTAAGCAAGAAGTGA
ACATCAACGAAAATAAGGTGGACGGTTTTTCATCCATGCCTAAGGAGTGGAAGTATGCTCCATCCCATCCTAAGGATTTAATTCTTGATGATCCCGAACAAGAGTGTATA
CGGCCAGAAGAAATGGGTAAAGTTGATGATCCCAAATATTGCAAGTACCACCGAGTTATCAGTCATCCAGTGGAAAAGTGTGTTGTCTTAAAAGAGCGTATCCTAAATTT
AGCTCGAGAACGAAAGATTGAGTTGGATTTCAATGAAATAACTCAATCAGATCACATTGCAGTAACAACAAATATAAGCAGCCAAACACCTCAAAGTCTATTCTACAATA
AGGGTATATACTTGATCCAATTTGAAACGTTGAAGCCTATATTTGTTCTCTCTCAACCGAAGACTTCAAGAAATACCATTAAAGATGTTGTCAAATCTGTCAATCATGGA
AAGGAAGACTGGGCTATTATGACTTGTCGAAAGAAACAAAAACAAAGTTTTGCTCGAAGAAGTCACTTATGCTCATCAAAGAGCATGAACACCAAGAAAGAAGAATTCAA
GGAAGCCTAA
Protein sequenceShow/hide protein sequence
MKVTWDDSDESGSESENEEVANFCFMAHSDKKDEQDDEVNLDPLSYDELFEAFENMQNDLEKLGSKYVMLKKKYNALISENKSLLDDIACLKKNEHDVVNISCDKHVLNC
DEKNVLLDKIRFLEHHGCEKDNLIRLLKKNESNALVELDKAKDSIKKLTIERNFGDLLVSDKSKEIASSKQEVNINENKVDGFSSMPKEWKYAPSHPKDLILDDPEQECI
RPEEMGKVDDPKYCKYHRVISHPVEKCVVLKERILNLARERKIELDFNEITQSDHIAVTTNISSQTPQSLFYNKGIYLIQFETLKPIFVLSQPKTSRNTIKDVVKSVNHG
KEDWAIMTCRKKQKQSFARRSHLCSSKSMNTKKEEFKEA