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Moc10g14940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g14940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr10:11369659..11370114
RNA-Seq ExpressionMoc10g14940
SyntenyMoc10g14940
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143540.1 uncharacterized protein LOC111013417 [Momordica charantia]7.3e-4563.58Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        M++SI+ L A+EKLN  NY   K+NLN ILV++DLRFVL EE P  PA +A   V + +DRW+KANDKA VYIL S+++VLAKKHE ++TAKEIMDSL++
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFG+ SS  +HE LK+VYN  MKEG SVREHVL++M+HFN AE NEA IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

XP_022151295.1 uncharacterized protein LOC111019259 [Momordica charantia]1.5e-74100Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.2e-5476.82Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MS SIIALLA ++LN ENYKQ KSNLN ILVI+DL+FVLQE+ P A A +ATVAV   YDRWIKANDKA+VYIL SIS+VLAKKHE+ +TAKEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQ SSQA+HE LKF+YNS MKEG SVREHVLNLM+HFN+AE+N A+IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]3.4e-5072.19Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MS SII LL  +KLN ENYKQ KSN+N IL+I+DLRFVLQE+ P APA +ATVAV   YDRWIKANDKA+V IL SIS+VLAKKHEN V  KEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQ SSQA+HE L  +YNS MK+  SVREHVLNLM+HFN+AE+N  +IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]2.9e-5476.82Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MSASIIALLA +KLN ENY+Q KSNLN ILVI+DLRFVLQE+ P AP  +ATVAV   YDRWIK+NDKA+VYIL SIS+VLAKKHE+ VT KEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQ S QA+HE LKFVYNS MKEG SVREHVLNLM+HFN+AE+N  +IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

TrEMBL top hitse value%identityAlignment
A0A6J1CP29 uncharacterized protein LOC1110134173.5e-4563.58Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        M++SI+ L A+EKLN  NY   K+NLN ILV++DLRFVL EE P  PA +A   V + +DRW+KANDKA VYIL S+++VLAKKHE ++TAKEIMDSL++
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFG+ SS  +HE LK+VYN  MKEG SVREHVL++M+HFN AE NEA IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

A0A6J1DAT1 uncharacterized protein LOC1110192597.3e-75100Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

A0A6J1DFZ2 uncharacterized protein LOC1110200951.1e-5476.82Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MS SIIALLA ++LN ENYKQ KSNLN ILVI+DL+FVLQE+ P A A +ATVAV   YDRWIKANDKA+VYIL SIS+VLAKKHE+ +TAKEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQ SSQA+HE LKF+YNS MKEG SVREHVLNLM+HFN+AE+N A+IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

A0A6J1DW68 uncharacterized protein LOC1110246371.6e-5072.19Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MS SII LL  +KLN ENYKQ KSN+N IL+I+DLRFVLQE+ P APA +ATVAV   YDRWIKANDKA+V IL SIS+VLAKKHEN V  KEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQ SSQA+HE L  +YNS MK+  SVREHVLNLM+HFN+AE+N  +IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

A0A6J1DWL0 uncharacterized protein LOC1110247341.4e-5476.82Show/hide
Query:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS
        MSASIIALLA +KLN ENY+Q KSNLN ILVI+DLRFVLQE+ P AP  +ATVAV   YDRWIK+NDKA+VYIL SIS+VLAKKHE+ VT KEIMDSLQS
Subjt:  MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQS

Query:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE
        MFGQ S QA+HE LKFVYNS MKEG SVREHVLNLM+HFN+AE+N  +IDE
Subjt:  MFGQSSSQAQHEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCTTCTATTATTGCTCTCTTAGCCACTGAAAAACTTAACAGTGAGAATTACAAACAATTGAAATCGAACCTAAACATTATACTTGTAATAAATGATCTTAGGTT
CGTCTTGCAAGAGGAACGTCCTTTAGCTCCTGCGCTTGACGCCACTGTGGCGGTGCACAAATTCTATGATCGGTGGATCAAGGCAAATGATAAGGCCGAGGTCTACATAT
TGACGAGCATATCTAATGTGCTTGCTAAGAAGCACGAGAATATGGTCACTGCCAAGGAGATCATGGACTCGTTGCAGAGCATGTTTGGACAATCGTCCTCACAGGCTCAA
CATGAAGTCCTTAAGTTCGTCTATAACTCCTGCATGAAGGAGGGCTTGTCAGTGCGAGAACACGTTCTCAACCTGATGATCCACTTCAACATGGCGGAGACGAATGAGGC
CATCATAGACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCTTCTATTATTGCTCTCTTAGCCACTGAAAAACTTAACAGTGAGAATTACAAACAATTGAAATCGAACCTAAACATTATACTTGTAATAAATGATCTTAGGTT
CGTCTTGCAAGAGGAACGTCCTTTAGCTCCTGCGCTTGACGCCACTGTGGCGGTGCACAAATTCTATGATCGGTGGATCAAGGCAAATGATAAGGCCGAGGTCTACATAT
TGACGAGCATATCTAATGTGCTTGCTAAGAAGCACGAGAATATGGTCACTGCCAAGGAGATCATGGACTCGTTGCAGAGCATGTTTGGACAATCGTCCTCACAGGCTCAA
CATGAAGTCCTTAAGTTCGTCTATAACTCCTGCATGAAGGAGGGCTTGTCAGTGCGAGAACACGTTCTCAACCTGATGATCCACTTCAACATGGCGGAGACGAATGAGGC
CATCATAGACGAGTAG
Protein sequenceShow/hide protein sequence
MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYDRWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQSMFGQSSSQAQ
HEVLKFVYNSCMKEGLSVREHVLNLMIHFNMAETNEAIIDE