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Moc10g15260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g15260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:11579900..11581233
RNA-Seq ExpressionMoc10g15260
SyntenyMoc10g15260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]8.5e-2250.35Show/hide
Query:  SPHLDDEESPSPIQEGASSLEDAPRDAAESNSSPSKGLSLYLL------------TINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHL
        S H D    P  + +G  +  D P  + + ++   KG  L  L               +R+TESL DYV  FN+EKLQVEGLTDAVSLLAF+  V DEHL
Subjt:  SPHLDDEESPSPIQEGASSLEDAPRDAAESNSSPSKGLSLYLL------------TINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHL

Query:  AFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        +FS GK+T STFSEALS  ++YMSAGEFF+SKR+S GKR +
Subjt:  AFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.9e-2777.53Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+TESL DYVA FNEEKLQVEGLT+AVSL+AFMSD+ DEHL+FS GKKT STFSEALS  +KYMSAGEFF SKR+ EGK+++
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.7e-2776.4Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+TESL+DYVA FNEEKLQVEGLTDAVSLLAFMS V DEHL+FS GK+T +TFSEALS  ++YMSAGEFF+SKR+ +GKR +
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.0e-2371.91Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+ ESL DYVA FNEEKLQ+EGLTDAVSLLAFMS V DEHL+FS  K+T STFSEALS  ++YMSA EF +SKR+ +GKR +
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.8e-2573.03Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+TESL DYVA FN+EKLQ+E LTD VSLLAFMS V DEHL+FS GKKT STFSE LS  ++YMSAGEFF+SKR+ +GKR +
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128054.1e-2250.35Show/hide
Query:  SPHLDDEESPSPIQEGASSLEDAPRDAAESNSSPSKGLSLYLL------------TINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHL
        S H D    P  + +G  +  D P  + + ++   KG  L  L               +R+TESL DYV  FN+EKLQVEGLTDAVSLLAF+  V DEHL
Subjt:  SPHLDDEESPSPIQEGASSLEDAPRDAAESNSSPSKGLSLYLL------------TINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHL

Query:  AFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        +FS GK+T STFSEALS  ++YMSAGEFF+SKR+S GKR +
Subjt:  AFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

A0A6J1D7D2 uncharacterized protein LOC1110183071.9e-2777.53Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+TESL DYVA FNEEKLQVEGLT+AVSL+AFMSD+ DEHL+FS GKKT STFSEALS  +KYMSAGEFF SKR+ EGK+++
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

A0A6J1DWY0 uncharacterized protein LOC1110252933.3e-2776.4Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+TESL+DYVA FNEEKLQVEGLTDAVSLLAFMS V DEHL+FS GK+T +TFSEALS  ++YMSAGEFF+SKR+ +GKR +
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

A0A6J1DYL6 uncharacterized protein LOC1110257852.3e-2573.03Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+TESL DYVA FN+EKLQ+E LTD VSLLAFMS V DEHL+FS GKKT STFSE LS  ++YMSAGEFF+SKR+ +GKR +
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

A0A6J1E1E7 uncharacterized protein LOC1110255489.8e-2471.91Show/hide
Query:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE
        YLLTI QR+ ESL DYVA FNEEKLQ+EGLTDAVSLLAFMS V DEHL+FS  K+T STFSEALS  ++YMSA EF +SKR+ +GKR +
Subjt:  YLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKKTLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGGGTGGCATCCTACAGTATCAGTGGGCACCCGGTAAGTGAGAAAAAGCTACCTTGGCCAAGTAAGCGACAAGACTCATCCCGGTTGCCAAGTTTAGTCATTCC
TTGTCCGGATGTTGGCATGAATTATCCCGGTAGTATCCGGTCAGAACTCATCCCGAATTTCGCTGCAAGTGAAGCTCGGTCGAGGAAGAAAGAACCTCGCCTAAGGTTTG
ACGAAGCCACAAAGGACGCGAAAAGTGGATTGGGGCTAGAGTTCCCCGTATGGTTGGCCATGGTCAAGCTTAGATCATGGCGCCGCACGGTTGAAAAAGGTACGGCCGTG
ACACTGAGCAGGAAAACACAGATTCGAAAATCGCTGAAATTCTTGAGCCCACATCTAGATGATGAGGAGTCCCCTTCTCCAATCCAAGAAGGAGCATCCAGTCTTGAGGA
TGCCCCGAGAGATGCTGCAGAGTCTAACTCGTCTCCTTCTAAAGGTTTATCCCTTTACCTCCTTACTATAAATCAGAGGTCGACTGAAAGCCTCAAGGATTACGTGGCTT
GGTTCAACGAAGAAAAGTTACAAGTCGAGGGTTTAACAGATGCAGTGTCACTTCTGGCTTTTATGTCCGACGTAACGGATGAGCACCTGGCATTCTCGTCTGGGAAGAAG
ACCCTGAGTACCTTCTCGGAAGCATTGAGCTGCACCAAGAAATACATGAGTGCAGGGGAGTTTTTCCATTCAAAGCGAGACTCTGAGGGAAAACGTGCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGGGTGGCATCCTACAGTATCAGTGGGCACCCGGTAAGTGAGAAAAAGCTACCTTGGCCAAGTAAGCGACAAGACTCATCCCGGTTGCCAAGTTTAGTCATTCC
TTGTCCGGATGTTGGCATGAATTATCCCGGTAGTATCCGGTCAGAACTCATCCCGAATTTCGCTGCAAGTGAAGCTCGGTCGAGGAAGAAAGAACCTCGCCTAAGGTTTG
ACGAAGCCACAAAGGACGCGAAAAGTGGATTGGGGCTAGAGTTCCCCGTATGGTTGGCCATGGTCAAGCTTAGATCATGGCGCCGCACGGTTGAAAAAGGTACGGCCGTG
ACACTGAGCAGGAAAACACAGATTCGAAAATCGCTGAAATTCTTGAGCCCACATCTAGATGATGAGGAGTCCCCTTCTCCAATCCAAGAAGGAGCATCCAGTCTTGAGGA
TGCCCCGAGAGATGCTGCAGAGTCTAACTCGTCTCCTTCTAAAGGTTTATCCCTTTACCTCCTTACTATAAATCAGAGGTCGACTGAAAGCCTCAAGGATTACGTGGCTT
GGTTCAACGAAGAAAAGTTACAAGTCGAGGGTTTAACAGATGCAGTGTCACTTCTGGCTTTTATGTCCGACGTAACGGATGAGCACCTGGCATTCTCGTCTGGGAAGAAG
ACCCTGAGTACCTTCTCGGAAGCATTGAGCTGCACCAAGAAATACATGAGTGCAGGGGAGTTTTTCCATTCAAAGCGAGACTCTGAGGGAAAACGTGCTGAGTAG
Protein sequenceShow/hide protein sequence
MLGVASYSISGHPVSEKKLPWPSKRQDSSRLPSLVIPCPDVGMNYPGSIRSELIPNFAASEARSRKKEPRLRFDEATKDAKSGLGLEFPVWLAMVKLRSWRRTVEKGTAV
TLSRKTQIRKSLKFLSPHLDDEESPSPIQEGASSLEDAPRDAAESNSSPSKGLSLYLLTINQRSTESLKDYVAWFNEEKLQVEGLTDAVSLLAFMSDVTDEHLAFSSGKK
TLSTFSEALSCTKKYMSAGEFFHSKRDSEGKRAE