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Moc10g15980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g15980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr10:12109418..12110266
RNA-Seq ExpressionMoc10g15980
SyntenyMoc10g15980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.5e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

A0A5A7TWB9 Gag/pol protein4.5e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

A0A5A7V4M1 Gag/pol protein4.5e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

A0A5D3CPJ6 Gag/pol protein4.5e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

A0A5D3CSZ6 Gag/pol protein4.5e-3538.27Show/hide
Query:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF
        RAY++      L +   +    ++IM+ LQ MFGQ+  Q +H+ALK+IYN+RM EG+SV+ H+ N+MVHFNV E NG VIDE SQVSFILESL +SFL+F
Subjt:  RAYLIC-----LLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLKKSFLRF

Query:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY
         +NA+M K                                                     +K +KKKK  G G K  +N A AK  K     KG CF+ 
Subjt:  SNNAIMIK-----------------------------------------------------SKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYY

Query:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG
        N +GHWKRN PKYL E++K                             T  + ++FQ ISSWR+LE GEMT++VG G
Subjt:  NVDGHWKRNYPKYLTERRK----------------------------PTKELVTTFQRISSWRKLEAGEMTLKVGMG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGTGCATCAAGGCCAACTATAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATATGCTTGCTAAGAAGCACGAGAACATGGTCACTGCCAAAGAAG
ATCATGGAATTGCTGCAGAGCATGTTTGGACAATCATTCTCACAGGCTCGACATGAAGCCCTCAAGTTCATCTATAACTCCCGCATGAAGGAGGGCTCGTCTGTG
CAAGGACACATTTTCAACCTGATGGTTCACTTCAATGTGACAGAAACAAACGGGGTCGTCATAGACGAGCAGAGTCAGGTTAGCTTCATTCTAGAATCTCTTAAG
AAGAGTTTCCTGCGATTCAGCAACAATGCGATTATGATTAAAAGTAAGATTTTCAAGAAGAAGAAAGCTACTGGTAATGGGCCCAAACCTGACTCTAATGCTGCC
ATTGCTAAGAAAGACAAGGCCAAGGTTGTAGACAAGGGACAATGTTTCTACTACAACGTGGACGGGCATTGGAAGCGCAACTACCCGAAATACCTGACCGAAAGA
AGAAAACCAACGAAGGAGCTAGTAACCACATTTCAGAGGATCAGTTCCTGGAGGAAGCTTGAAGCCGGAGAAATGACTCTCAAGGTCGGAATGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCGGTGCATCAAGGCCAACTATAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATATGCTTGCTAAGAAGCACGAGAACATGGTCACTGCCAAAGAAG
ATCATGGAATTGCTGCAGAGCATGTTTGGACAATCATTCTCACAGGCTCGACATGAAGCCCTCAAGTTCATCTATAACTCCCGCATGAAGGAGGGCTCGTCTGTG
CAAGGACACATTTTCAACCTGATGGTTCACTTCAATGTGACAGAAACAAACGGGGTCGTCATAGACGAGCAGAGTCAGGTTAGCTTCATTCTAGAATCTCTTAAG
AAGAGTTTCCTGCGATTCAGCAACAATGCGATTATGATTAAAAGTAAGATTTTCAAGAAGAAGAAAGCTACTGGTAATGGGCCCAAACCTGACTCTAATGCTGCC
ATTGCTAAGAAAGACAAGGCCAAGGTTGTAGACAAGGGACAATGTTTCTACTACAACGTGGACGGGCATTGGAAGCGCAACTACCCGAAATACCTGACCGAAAGA
AGAAAACCAACGAAGGAGCTAGTAACCACATTTCAGAGGATCAGTTCCTGGAGGAAGCTTGAAGCCGGAGAAATGACTCTCAAGGTCGGAATGGGATAG
Protein sequenceShow/hide protein sequence
MTGASRPTIRPRSTSWRAYLICLLRSTRTWSLPKKIMELLQSMFGQSFSQARHEALKFIYNSRMKEGSSVQGHIFNLMVHFNVTETNGVVIDEQSQVSFILESLK
KSFLRFSNNAIMIKSKIFKKKKATGNGPKPDSNAAIAKKDKAKVVDKGQCFYYNVDGHWKRNYPKYLTERRKPTKELVTTFQRISSWRKLEAGEMTLKVGMG