; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g20060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g20060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:14807822..14808643
RNA-Seq ExpressionMoc10g20060
SyntenyMoc10g20060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]3.2e-5182.84Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSE+R ARN++ EQRG HLGPV++  P G E EEYTHQRGDLREHLNRKRSSSLRKG+SPSCSH+NSNQQAESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNP

Query:  ITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        ITPEGVITREEFDQLK+KFDAQVEALKA+CEK++
Subjt:  ITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]1.7e-2038.36Show/hide
Query:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQPANSTNTADRRALAAN  HQREVG   VEG  HE LGTEPL RSA ITT VLPP HPKPSK                                    
Subjt:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT
                                                                                                   AESSYNPIT
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT

Query:  PEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        P GVITREEFDQLK+KFDAQVEALKARCEK++
Subjt:  PEGVITREEFDQLKNKFDAQVEALKARCEKEQ

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]1.0e-2887.65Show/hide
Query:  EYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        E EEYTHQRGDLREHLNRKRSSSLRKG+SPS SH+NSNQQAESSYNPITP+ VITREEFDQLK+KFDAQVEALKA CEK++
Subjt:  EYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.5e-3567.15Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESS
        MEAMRTQMRTMEEMYN+MVQ AGA SRS D+    +V EQ  LH  PV+EE           H  GDLR+HLNRKR+SS R  R+ +  HKNSNQQAESS
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESS

Query:  YNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        YNPI PEGVITREEF+QLK+KFDAQVEALK RCEK++
Subjt:  YNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]4.8e-7974.67Show/hide
Query:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQP +STNT DRRAL AND HQREVG   VEG +HEGLGTEP  RSA ITT  L P HPKP KANRGRGGASRRTT G APAP+RENFDALQKEMEAMR
Subjt:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT
        TQM TMEEMYNEMVQA GAGSRSEDRAAR+E                            RGDLR+HL+RKRSSSLRKGRSPSCSHKNSNQQAESSYNP+ 
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT

Query:  PEGVITREEFDQLKNKFDAQVEALKARCE
        PEGVITREEFDQLK+KFDAQVE LKARCE
Subjt:  PEGVITREEFDQLKNKFDAQVEALKARCE

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196341.6e-5182.84Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSE+R ARN++ EQRG HLGPV++  P G E EEYTHQRGDLREHLNRKRSSSLRKG+SPSCSH+NSNQQAESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNP

Query:  ITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        ITPEGVITREEFDQLK+KFDAQVEALKA+CEK++
Subjt:  ITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ

A0A6J1DHB3 uncharacterized protein LOC1110204798.3e-2138.36Show/hide
Query:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQPANSTNTADRRALAAN  HQREVG   VEG  HE LGTEPL RSA ITT VLPP HPKPSK                                    
Subjt:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT
                                                                                                   AESSYNPIT
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT

Query:  PEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        P GVITREEFDQLK+KFDAQVEALKARCEK++
Subjt:  PEGVITREEFDQLKNKFDAQVEALKARCEKEQ

A0A6J1DM55 uncharacterized protein LOC1110222674.9e-2987.65Show/hide
Query:  EYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        E EEYTHQRGDLREHLNRKRSSSLRKG+SPS SH+NSNQQAESSYNPITP+ VITREEFDQLK+KFDAQVEALKA CEK++
Subjt:  EYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ

A0A6J1DPN4 uncharacterized protein LOC1110230607.0e-3667.15Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESS
        MEAMRTQMRTMEEMYN+MVQ AGA SRS D+    +V EQ  LH  PV+EE           H  GDLR+HLNRKR+SS R  R+ +  HKNSNQQAESS
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESS

Query:  YNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ
        YNPI PEGVITREEF+QLK+KFDAQVEALK RCEK++
Subjt:  YNPITPEGVITREEFDQLKNKFDAQVEALKARCEKEQ

A0A6J1DZJ1 uncharacterized protein LOC1110257382.3e-7974.67Show/hide
Query:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR
        MVQP +STNT DRRAL AND HQREVG   VEG +HEGLGTEP  RSA ITT  L P HPKP KANRGRGGASRRTT G APAP+RENFDALQKEMEAMR
Subjt:  MVQPANSTNTADRRALAANDDHQREVG---VEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT
        TQM TMEEMYNEMVQA GAGSRSEDRAAR+E                            RGDLR+HL+RKRSSSLRKGRSPSCSHKNSNQQAESSYNP+ 
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPIT

Query:  PEGVITREEFDQLKNKFDAQVEALKARCE
        PEGVITREEFDQLK+KFDAQVE LKARCE
Subjt:  PEGVITREEFDQLKNKFDAQVEALKARCE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCCAGCAAACTCAACCAACACGGCCGACCGAAGAGCTCTGGCTGCCAATGATGACCACCAGAGGGAGGTCGGGGTAGAGGGACATGTTCATGAAGGCCTTGG
GACCGAGCCTCTCCGTAGGTCGGCATGCATAACCACGCATGTCCTGCCACCGACACATCCAAAGCCGTCTAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGAACCA
CTCGAGGACCAGCCCCAGCTCCTACAAGGGAGAATTTTGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCGCACTATGGAAGAGATGTACAACGAGATG
GTGCAAGCCGCAGGTGCTGGGTCTCGATCTGAAGACCGAGCGGCACGCAACGAGGTGCGCGAGCAAAGAGGTCTTCACCTCGGTCCAGTCGAGGAAGAGCGCCCTGGAGG
AGATGAATATGAAGAGTACACTCATCAGAGAGGCGATCTTCGCGAGCACCTCAATAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACGATCTCCGTCCTGCTCACACAAGA
ATTCCAACCAGCAGGCCGAATCTTCTTACAACCCGATAACTCCCGAGGGAGTGATCACAAGGGAGGAGTTCGACCAGCTAAAGAACAAGTTCGATGCTCAGGTTGAAGCC
TTGAAGGCTAGGTGCGAGAAAGAACAAGTGCTTACCCTCTTGTGCAGGTCCACTCTTGAGTTCAAGTCGAGCCGGGGACCGGGTTCGAGCTTGGTTCGTAAAGCATCGTT
GTGCAGACCTTTGCATAAACATCACGGAAATCTAGACCTCCAAAACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGCCAGCAAACTCAACCAACACGGCCGACCGAAGAGCTCTGGCTGCCAATGATGACCACCAGAGGGAGGTCGGGGTAGAGGGACATGTTCATGAAGGCCTTGG
GACCGAGCCTCTCCGTAGGTCGGCATGCATAACCACGCATGTCCTGCCACCGACACATCCAAAGCCGTCTAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGAACCA
CTCGAGGACCAGCCCCAGCTCCTACAAGGGAGAATTTTGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCGCACTATGGAAGAGATGTACAACGAGATG
GTGCAAGCCGCAGGTGCTGGGTCTCGATCTGAAGACCGAGCGGCACGCAACGAGGTGCGCGAGCAAAGAGGTCTTCACCTCGGTCCAGTCGAGGAAGAGCGCCCTGGAGG
AGATGAATATGAAGAGTACACTCATCAGAGAGGCGATCTTCGCGAGCACCTCAATAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACGATCTCCGTCCTGCTCACACAAGA
ATTCCAACCAGCAGGCCGAATCTTCTTACAACCCGATAACTCCCGAGGGAGTGATCACAAGGGAGGAGTTCGACCAGCTAAAGAACAAGTTCGATGCTCAGGTTGAAGCC
TTGAAGGCTAGGTGCGAGAAAGAACAAGTGCTTACCCTCTTGTGCAGGTCCACTCTTGAGTTCAAGTCGAGCCGGGGACCGGGTTCGAGCTTGGTTCGTAAAGCATCGTT
GTGCAGACCTTTGCATAAACATCACGGAAATCTAGACCTCCAAAACATTTAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRALAANDDHQREVGVEGHVHEGLGTEPLRRSACITTHVLPPTHPKPSKANRGRGGASRRTTRGPAPAPTRENFDALQKEMEAMRTQMRTMEEMYNEM
VQAAGAGSRSEDRAARNEVREQRGLHLGPVEEERPGGDEYEEYTHQRGDLREHLNRKRSSSLRKGRSPSCSHKNSNQQAESSYNPITPEGVITREEFDQLKNKFDAQVEA
LKARCEKEQVLTLLCRSTLEFKSSRGPGSSLVRKASLCRPLHKHHGNLDLQNI