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Moc10g23340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g23340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr10:16874067..16874543
RNA-Seq ExpressionMoc10g23340
SyntenyMoc10g23340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017233064.1 PREDICTED: uncharacterized protein LOC108207111 [Daucus carota subsp. sativus]3.3e-1337.84Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAV----------------------------GAKTPLVL---ELRLAKTSIE
        M VQD++V F+V  +MK+S + E+CS + I DE + ++LE+    + LE +                            G    L L   E +  K+SI+
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAV----------------------------GAKTPLVL---ELRLAKTSIE

Query:  DPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLLNVLKTH
        +PP LELKALP HLKYAYL  S TLP+II+A+L + +E+ L+ +LK H
Subjt:  DPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLLNVLKTH

XP_022143500.1 uncharacterized protein LOC111013378 [Momordica charantia]1.3e-1241.96Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLER--------LEAVG---------------------AKTPLVLE---LRLAKTSI
        M VQDQE+KFS+++SMK+ +++ E +VL++LDEA+++ L  E MLE+        LE                            LVLE    +  KTSI
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLER--------LEAVG---------------------AKTPLVLE---LRLAKTSI

Query:  EDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLL
        E+ P L LKA+P+H+KYAYL  S  LPIII A L +EKE  LL
Subjt:  EDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLL

XP_022144016.1 uncharacterized protein LOC111013805 [Momordica charantia]2.9e-1796.36Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKT
        MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELE EVMLERLEAVGAK+
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKT

XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]1.1e-1344.54Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKTPLVLELRLA--KTSIEDPPVLELKALPQHLKYAYLALSETLPIII
        + V DQ+V  S+ NS+K+  + EECS L+I D+ + +E++TE +L +LE     T ++ +   A  + S+   P LELK LP HLKYAYL   ETLP+ I
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKTPLVLELRLA--KTSIEDPPVLELKALPQHLKYAYLALSETLPIII

Query:  AADLPLEKEQMLLNVLKTH
        AADL  EKE  L+ +L+ H
Subjt:  AADLPLEKEQMLLNVLKTH

XP_028772272.1 uncharacterized protein LOC114729441 [Prosopis alba]1.3e-1238.66Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAV--GAKTPLVLELRLAKTSIEDPPVLELKALPQHLKYAYLALSETLPIII
        + V D+ V F+VH+ MK  ++  +CS + I+D+ + ++    +  + LEAV  G +     +  + + S+E+PP LELKALP +L YAYL  + TLP+II
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAV--GAKTPLVLELRLAKTSIEDPPVLELKALPQHLKYAYLALSETLPIII

Query:  AADLPLEKEQMLLNVLKTH
        ++DL +++E+ L+ VLK H
Subjt:  AADLPLEKEQMLLNVLKTH

TrEMBL top hitse value%identityAlignment
A0A2G9HYA0 Reverse transcriptase2.0e-1138Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEEC-------------------------SVLKILDEALMEELETEVMLE--------RLEAVGAKTPLVLELRLAKTS
        M VQDQ++ F+V  +MKF  ES+EC                         ++L +LDE   E+LE    L+        R+E++   TP     ++ K S
Subjt:  MHVQDQEVKFSVHNSMKFSAESEEC-------------------------SVLKILDEALMEELETEVMLE--------RLEAVGAKTPLVLELRLAKTS

Query:  IEDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLLNVLKTH
        IEDPP LELK LP HL YAYL  S+TLP+II++ L   + + LL VL+ H
Subjt:  IEDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLLNVLKTH

A0A6J1CNZ2 uncharacterized protein LOC1110133786.1e-1341.96Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLER--------LEAVG---------------------AKTPLVLE---LRLAKTSI
        M VQDQE+KFS+++SMK+ +++ E +VL++LDEA+++ L  E MLE+        LE                            LVLE    +  KTSI
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLER--------LEAVG---------------------AKTPLVLE---LRLAKTSI

Query:  EDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLL
        E+ P L LKA+P+H+KYAYL  S  LPIII A L +EKE  LL
Subjt:  EDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLL

A0A6J1CS22 uncharacterized protein LOC1110138051.4e-1796.36Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKT
        MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELE EVMLERLEAVGAK+
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKT

A0A6J1D1L0 uncharacterized protein LOC1110161982.0e-1137.58Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLE--------------------------------AVGAKTPLVLELRLAKTSI
        M V DQ+V F + NS+KF A+ EECS+L++ D+   EE++TE +L++LE                                A  +      E    ++S+
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLE--------------------------------AVGAKTPLVLELRLAKTSI

Query:  EDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLLNVLKTH
        E    LELK LP HLKYAYL  +ETL I IAADL  +KE  L+ +LK H
Subjt:  EDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLEKEQMLLNVLKTH

A0A6J1DV77 uncharacterized protein LOC1110238185.5e-1444.54Show/hide
Query:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKTPLVLELRLA--KTSIEDPPVLELKALPQHLKYAYLALSETLPIII
        + V DQ+V  S+ NS+K+  + EECS L+I D+ + +E++TE +L +LE     T ++ +   A  + S+   P LELK LP HLKYAYL   ETLP+ I
Subjt:  MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKTPLVLELRLA--KTSIEDPPVLELKALPQHLKYAYLALSETLPIII

Query:  AADLPLEKEQMLLNVLKTH
        AADL  EKE  L+ +L+ H
Subjt:  AADLPLEKEQMLLNVLKTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTACAAGATCAAGAAGTGAAATTTTCTGTGCATAACTCCATGAAATTTTCTGCTGAATCTGAAGAGTGCTCAGTATTAAAGATCTTGGATGAAGCGTTA
ATGGAGGAGCTAGAAACAGAAGTCATGCTGGAACGTCTAGAAGCAGTTGGAGCCAAAACTCCTCTAGTGCTGGAGCTTAGATTAGCTAAGACATCTATTGAGGAC
CCGCCAGTGCTGGAGCTTAAAGCATTGCCGCAGCATCTGAAATATGCTTACTTGGCTTTATCAGAGACATTGCCAATCATCATAGCAGCGGACTTACCTTTAGAA
AAAGAGCAGATGCTGTTGAATGTACTCAAGACACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGTACAAGATCAAGAAGTGAAATTTTCTGTGCATAACTCCATGAAATTTTCTGCTGAATCTGAAGAGTGCTCAGTATTAAAGATCTTGGATGAAGCGTTA
ATGGAGGAGCTAGAAACAGAAGTCATGCTGGAACGTCTAGAAGCAGTTGGAGCCAAAACTCCTCTAGTGCTGGAGCTTAGATTAGCTAAGACATCTATTGAGGAC
CCGCCAGTGCTGGAGCTTAAAGCATTGCCGCAGCATCTGAAATATGCTTACTTGGCTTTATCAGAGACATTGCCAATCATCATAGCAGCGGACTTACCTTTAGAA
AAAGAGCAGATGCTGTTGAATGTACTCAAGACACATTAG
Protein sequenceShow/hide protein sequence
MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELETEVMLERLEAVGAKTPLVLELRLAKTSIEDPPVLELKALPQHLKYAYLALSETLPIIIAADLPLE
KEQMLLNVLKTH