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Moc10g23610 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g23610
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr10:16984639..16992550
RNA-Seq ExpressionMoc10g23610
SyntenyMoc10g23610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]2.7e-1760.47Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV   +++E+L+IYAL G+  +YNTF TSMR RSQP+TFEELHVLL  EE  L KQ K D+++  PT LL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1863.95Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV  +V+DE+L+IYAL G+ T+YNTF TSMR RS P+TFEELHVLL  EE  L KQ K D+    PTALL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

KAG7015254.1 hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-1863.95Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV  +V+DE+L+IYAL G+ T+YNTF TSMR RS P+TFEELHVLL  EE  L KQ K D+    PTALL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]2.7e-1760.47Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV   +++E+L+IYAL G+  +YNTF TSMR RSQP+TFEELHVLL  EE  L KQ K D+++  PT LL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

XP_022158378.1 uncharacterized protein LOC111024876 [Momordica charantia]2.4e-1855.34Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVSTLNSS--RNQIINPN
        Y++RIKELKD LANV V+VDDE+L+IY L G+ +++NTF TSMR RS+ I+F ELHVLL  E + ++KQ K D+ F  P AL+V++ ++S  RNQ +NPN
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVSTLNSS--RNQIINPN

Query:  MCK
          K
Subjt:  MCK

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X21.7e-1760.47Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV   +++E+L+IYAL G+  +YNTF TSMR RSQP+TFEELHVLL  EE  L KQ K D+++  PT LL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X31.7e-1760.47Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV   +++E+L+IYAL G+  +YNTF TSMR RSQP+TFEELHVLL  EE  L KQ K D+++  PT LL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X11.7e-1760.47Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV   +++E+L+IYAL G+  +YNTF TSMR RSQP+TFEELHVLL  EE  L KQ K D+++  PT LL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

A0A5D3CLI6 T4.51.7e-1760.47Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST
        Y+KRIKE+KD LANV   +++E+L+IYAL G+  +YNTF TSMR RSQP+TFEELHVLL  EE  L KQ K D+++  PT LL S+
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVST

A0A6J1DVX4 uncharacterized protein LOC1110248761.2e-1855.34Show/hide
Query:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVSTLNSS--RNQIINPN
        Y++RIKELKD LANV V+VDDE+L+IY L G+ +++NTF TSMR RS+ I+F ELHVLL  E + ++KQ K D+ F  P AL+V++ ++S  RNQ +NPN
Subjt:  YVKRIKELKDLLANVYVIVDDENLIIYALKGM-TDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVSTLNSS--RNQIINPN

Query:  MCK
          K
Subjt:  MCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAGTATGTTAAGAGAATCAAGGAACTCAAAGATCTATTAGCTAATGTCTATGTTATCGTTGATGACGAAAATCTAATTATATATGCCCTAAAAGGTATGACAGA
TTATAATACTTTTCATACGTCAATGCGTATGCGATCTCAACCCATTACCTTTGAAGAGCTTCACGTCTTATTAGTTTTTGAGGAGATTGAGTTAGAAAAACAAGTTAAAT
ATGATGAAGCTTTCACTTTTCCAACTGCTCTTCTTGTATCTACACTCAATTCCTCTAGAAATCAGATTATCAATCCTAATATGTGCAAGGTCATGGTTTCTCTGGCAAGA
ATAAAGGATTTACCAAGAATAATTCTTCTCATTCTGGATTTCTTGGTTGGTGTAGGCAATGGTCAGTCCTTACTAATTGCTCATATAGAGAACAAAAATGACCCAAAACG
GGACAAGGAGTTAAAGCCTGAGATCATCGATTGGGGGAGACTGGCCCGCGGTGTGAGGGGTCAGCCCAAAGAACGACCTAGCACCGAGGCAGAGAACGACGAAAGTATCG
GTTCCCTTATCATCGAGTTAGGTGTGTGCAAGAAGAAGAGCCGGACGGTCAAAATCCATGCATCAACAATTGGCGCCATCTATGAGGACCATACAGTAAAGCAAGCTTCG
TTGAAGCGAAATCCCGATCTGAGGCGAAATCCCGATCCGAGAGAAATTCCGATCCGAGGCGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAGTATGTTAAGAGAATCAAGGAACTCAAAGATCTATTAGCTAATGTCTATGTTATCGTTGATGACGAAAATCTAATTATATATGCCCTAAAAGGTATGACAGA
TTATAATACTTTTCATACGTCAATGCGTATGCGATCTCAACCCATTACCTTTGAAGAGCTTCACGTCTTATTAGTTTTTGAGGAGATTGAGTTAGAAAAACAAGTTAAAT
ATGATGAAGCTTTCACTTTTCCAACTGCTCTTCTTGTATCTACACTCAATTCCTCTAGAAATCAGATTATCAATCCTAATATGTGCAAGGTCATGGTTTCTCTGGCAAGA
ATAAAGGATTTACCAAGAATAATTCTTCTCATTCTGGATTTCTTGGTTGGTGTAGGCAATGGTCAGTCCTTACTAATTGCTCATATAGAGAACAAAAATGACCCAAAACG
GGACAAGGAGTTAAAGCCTGAGATCATCGATTGGGGGAGACTGGCCCGCGGTGTGAGGGGTCAGCCCAAAGAACGACCTAGCACCGAGGCAGAGAACGACGAAAGTATCG
GTTCCCTTATCATCGAGTTAGGTGTGTGCAAGAAGAAGAGCCGGACGGTCAAAATCCATGCATCAACAATTGGCGCCATCTATGAGGACCATACAGTAAAGCAAGCTTCG
TTGAAGCGAAATCCCGATCTGAGGCGAAATCCCGATCCGAGAGAAATTCCGATCCGAGGCGTGTAG
Protein sequenceShow/hide protein sequence
MSQYVKRIKELKDLLANVYVIVDDENLIIYALKGMTDYNTFHTSMRMRSQPITFEELHVLLVFEEIELEKQVKYDEAFTFPTALLVSTLNSSRNQIINPNMCKVMVSLAR
IKDLPRIILLILDFLVGVGNGQSLLIAHIENKNDPKRDKELKPEIIDWGRLARGVRGQPKERPSTEAENDESIGSLIIELGVCKKKSRTVKIHASTIGAIYEDHTVKQAS
LKRNPDLRRNPDPREIPIRGV