; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g23670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g23670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:17013109..17015874
RNA-Seq ExpressionMoc10g23670
SyntenyMoc10g23670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150760.1 uncharacterized protein LOC111018823 [Momordica charantia]2.6e-8871.65Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        P RR DRPAVINTIFGGPSGGQS +KRKELAR ARREVCIIREQ PT  ITFD ADLE VHL HNDA VIAPLIDHV+VRRVLVD G SANI+SL TYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLKKS T L                      D TQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGV  VRGEQ  SRE
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDLARSVPVEILDN
        CYASALKGS VCALE   +RD   + +A+LPR   R+F+ PTEELEL  L R    E +D+
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDLARSVPVEILDN

XP_022150861.1 uncharacterized protein LOC111018906 [Momordica charantia]5.8e-9677.69Show/hide
Query:  MPPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYL
        MPPRRDDR AVINTIF GPSGGQS NKRKELAREARREVCIIREQ PT SI+F DADLEGVHL HNDA VIAPLIDHVLVRRVLVDGGAS NILSL TYL
Subjt:  MPPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYL

Query:  ALGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSR
        ALGWTRSQLKKSPT L                      DDTQVTQMAEFVVI GRSAYNAIFGRPIIHSFRA+ STLHQVLKYSTPNGV TVRGEQKTSR
Subjt:  ALGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSR

Query:  ECYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        ECYASALKGS V ALE Q + DEL K EA+L +  KR+FS PTE+LEL  L
Subjt:  ECYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]2.5e-9174.4Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        PPRR DRPAVINTIFGGPSGGQS +KRK+LAR ARREVCIIREQ PT  ITFD ADL  VHL HNDA VIAPLIDHV+VRRVLVDGGASANILSLPTYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLKKSPT L                      D T+VTQMAEFVV+DGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGV TVRGEQ  SRE
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        CYAS LKG+ VCALE  T+RD   + EADLP    R+F+ P EELEL  L
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]1.4e-9475.2Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        PPRRDDRPAVINTIFGGPSGGQ  NKR +LAR  RREVCIIREQ PT  ITF DADLEGVHL HNDA VIAPLIDH+LVRRVL+DGGASANI SLPTYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLKKSPT L                      D TQVTQMAEFVVID +SAYNAIFGRPIIHSF A+ STLHQVLKYST NGV TVRGEQKTSR+
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        CYAS LKG  VC LE QTNR +LQ SEADLP++ KR+FS PTEELEL  L
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]2.5e-9174.8Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        PPRR DRPAVINTIFGGPSGGQS +KRKELAREARREVCIIREQ PT  ITFD ADLE VHL HNDA VIAPLIDHV+VRRVLVDGGASANILSLPTYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLK+SPT L                      D T+VTQM EFVV+DGRS YNAIFGRPIIHSFR IPSTLHQVLKYSTPNGV TVRGEQ  SRE
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        CYA+ALKGS VCALE  T RD   + EADLPR   ++F+ PTEELEL  L
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

TrEMBL top hitse value%identityAlignment
A0A6J1D9E1 uncharacterized protein LOC1110188231.3e-8871.65Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        P RR DRPAVINTIFGGPSGGQS +KRKELAR ARREVCIIREQ PT  ITFD ADLE VHL HNDA VIAPLIDHV+VRRVLVD G SANI+SL TYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLKKS T L                      D TQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGV  VRGEQ  SRE
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDLARSVPVEILDN
        CYASALKGS VCALE   +RD   + +A+LPR   R+F+ PTEELEL  L R    E +D+
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDLARSVPVEILDN

A0A6J1DCR3 uncharacterized protein LOC1110189062.8e-9677.69Show/hide
Query:  MPPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYL
        MPPRRDDR AVINTIF GPSGGQS NKRKELAREARREVCIIREQ PT SI+F DADLEGVHL HNDA VIAPLIDHVLVRRVLVDGGAS NILSL TYL
Subjt:  MPPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYL

Query:  ALGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSR
        ALGWTRSQLKKSPT L                      DDTQVTQMAEFVVI GRSAYNAIFGRPIIHSFRA+ STLHQVLKYSTPNGV TVRGEQKTSR
Subjt:  ALGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSR

Query:  ECYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        ECYASALKGS V ALE Q + DEL K EA+L +  KR+FS PTE+LEL  L
Subjt:  ECYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

A0A6J1DD03 uncharacterized protein LOC1110198991.2e-9174.4Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        PPRR DRPAVINTIFGGPSGGQS +KRK+LAR ARREVCIIREQ PT  ITFD ADL  VHL HNDA VIAPLIDHV+VRRVLVDGGASANILSLPTYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLKKSPT L                      D T+VTQMAEFVV+DGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGV TVRGEQ  SRE
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        CYAS LKG+ VCALE  T+RD   + EADLP    R+F+ P EELEL  L
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

A0A6J1DPX9 uncharacterized protein LOC1110220066.9e-9575.2Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        PPRRDDRPAVINTIFGGPSGGQ  NKR +LAR  RREVCIIREQ PT  ITF DADLEGVHL HNDA VIAPLIDH+LVRRVL+DGGASANI SLPTYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLKKSPT L                      D TQVTQMAEFVVID +SAYNAIFGRPIIHSF A+ STLHQVLKYST NGV TVRGEQKTSR+
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        CYAS LKG  VC LE QTNR +LQ SEADLP++ KR+FS PTEELEL  L
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

A0A6J1DYW5 uncharacterized protein LOC1110243321.2e-9174.8Show/hide
Query:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA
        PPRR DRPAVINTIFGGPSGGQS +KRKELAREARREVCIIREQ PT  ITFD ADLE VHL HNDA VIAPLIDHV+VRRVLVDGGASANILSLPTYLA
Subjt:  PPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLA

Query:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE
        LGWTRSQLK+SPT L                      D T+VTQM EFVV+DGRS YNAIFGRPIIHSFR IPSTLHQVLKYSTPNGV TVRGEQ  SRE
Subjt:  LGWTRSQLKKSPTAL----------------------DDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRE

Query:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL
        CYA+ALKGS VCALE  T RD   + EADLPR   ++F+ PTEELEL  L
Subjt:  CYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVPTEELELTDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCTCGTCGAGATGATCGACCTGCAGTCATCAACACCATTTTTGGAGGCCCAAGTGGGGGCCAGTCTGAAAATAAAAGAAAAGAGCTAGCTCGCGAAGCCAGGCG
CGAGGTATGCATCATTAGGGAGCAGATACCGACCTCCTCCATTACCTTCGACGACGCCGACCTAGAGGGGGTCCATTTGTCCCATAATGACGCATTTGTGATCGCCCCTC
TCATCGATCACGTCTTGGTCCGAAGAGTACTGGTAGATGGAGGTGCATCTGCCAACATCTTGTCCCTTCCAACATATCTTGCCTTAGGATGGACCAGGTCACAGCTGAAG
AAGAGTCCAACAGCCTTGGATGATACACAAGTAACTCAGATGGCCGAGTTTGTTGTGATCGACGGCAGGTCGGCCTACAATGCCATCTTCGGGAGACCCATCATCCACTC
ATTCCGAGCCATTCCCTCAACGCTTCATCAAGTTTTGAAATACTCAACTCCCAATGGAGTGGACACGGTTCGAGGAGAGCAGAAGACTTCAAGGGAGTGTTATGCCTCCG
CACTCAAAGGGTCGTTAGTGTGCGCCCTGGAAGGACAAACCAACCGGGACGAGCTGCAAAAATCCGAGGCCGACCTACCTAGAGAAGGCAAAAGGAAGTTCTCTGTGCCA
ACAGAGGAGCTCGAGCTTACCGACCTGGCCAGGTCGGTCCCGGTCGAGATCCTGGACAACCTTTCAATCTTGGAGCCAGATTTGATGGAGGTTGACACTCCAGCACCCTC
GTGGATGGATCCAATCGTGGAGTTCATAAAAGGGAATCCACCGCAAGATTCAAACGAGCACAAGAAGATGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCTCGTCGAGATGATCGACCTGCAGTCATCAACACCATTTTTGGAGGCCCAAGTGGGGGCCAGTCTGAAAATAAAAGAAAAGAGCTAGCTCGCGAAGCCAGGCG
CGAGGTATGCATCATTAGGGAGCAGATACCGACCTCCTCCATTACCTTCGACGACGCCGACCTAGAGGGGGTCCATTTGTCCCATAATGACGCATTTGTGATCGCCCCTC
TCATCGATCACGTCTTGGTCCGAAGAGTACTGGTAGATGGAGGTGCATCTGCCAACATCTTGTCCCTTCCAACATATCTTGCCTTAGGATGGACCAGGTCACAGCTGAAG
AAGAGTCCAACAGCCTTGGATGATACACAAGTAACTCAGATGGCCGAGTTTGTTGTGATCGACGGCAGGTCGGCCTACAATGCCATCTTCGGGAGACCCATCATCCACTC
ATTCCGAGCCATTCCCTCAACGCTTCATCAAGTTTTGAAATACTCAACTCCCAATGGAGTGGACACGGTTCGAGGAGAGCAGAAGACTTCAAGGGAGTGTTATGCCTCCG
CACTCAAAGGGTCGTTAGTGTGCGCCCTGGAAGGACAAACCAACCGGGACGAGCTGCAAAAATCCGAGGCCGACCTACCTAGAGAAGGCAAAAGGAAGTTCTCTGTGCCA
ACAGAGGAGCTCGAGCTTACCGACCTGGCCAGGTCGGTCCCGGTCGAGATCCTGGACAACCTTTCAATCTTGGAGCCAGATTTGATGGAGGTTGACACTCCAGCACCCTC
GTGGATGGATCCAATCGTGGAGTTCATAAAAGGGAATCCACCGCAAGATTCAAACGAGCACAAGAAGATGGCGTGA
Protein sequenceShow/hide protein sequence
MPPRRDDRPAVINTIFGGPSGGQSENKRKELAREARREVCIIREQIPTSSITFDDADLEGVHLSHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLALGWTRSQLK
KSPTALDDTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVDTVRGEQKTSRECYASALKGSLVCALEGQTNRDELQKSEADLPREGKRKFSVP
TEELELTDLARSVPVEILDNLSILEPDLMEVDTPAPSWMDPIVEFIKGNPPQDSNEHKKMA