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Moc10g23690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g23690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:17018425..17019614
RNA-Seq ExpressionMoc10g23690
SyntenyMoc10g23690
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144033.1 uncharacterized protein LOC111013825 [Momordica charantia]3.1e-1588.46Show/hide
Query:  REVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        ++ ESSYNPIT EGVITREEFDQLKSKFDAQVEALKARC+KK STFDDGDLG
Subjt:  REVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.5e-2253.15Show/hide
Query:  MCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF---------------TSTQSMRSTLEE--MKMRSTLIR--------------EVESSYNP
        M T+M TME+MY+EMVQAAGA SRSE+R A +++ EQ+                       R  L E   + RS+ +R              + ESSYNP
Subjt:  MCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF---------------TSTQSMRSTLEE--MKMRSTLIR--------------EVESSYNP

Query:  ITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        ITPEGVITREEFDQLKSKFDAQVEALKA+C+KKES+FDDGDLG
Subjt:  ITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]8.9e-2344.15Show/hide
Query:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR
        QREVGAEV EGQ HE  GTEPL RSARITTPV PPAHPKPSKA                                                         
Subjt:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR

Query:  SEDRAACDEVREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
                                               ESSYNPITP GVITREEFDQLKSKFDAQVEALKARC+KKES+FDDGDLG
Subjt:  SEDRAACDEVREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.2e-2253.33Show/hide
Query:  MESMCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF--------------------TSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVIT
        ME+M T+MRTMEEMYN+MVQ AGA SRS D+   ++V EQ                           S R             ++ ESSYNPI PEGVIT
Subjt:  MESMCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF--------------------TSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVIT

Query:  REEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        REEF+QLKSKFDAQVEALK RC+KKES FDDGDLG
Subjt:  REEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]2.8e-6171.73Show/hide
Query:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR
        QREVGAEV EGQ+HE  GTEP  RSARITTP   PAHPKP KANRGRGGASRRTT GAAPAP+RENFDALQKEME+M T+M TMEEMYNEMVQA GAGSR
Subjt:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR

Query:  SEDRAACDE---VREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        SEDRAA DE   +R+      + S+R             ++ ESSYNP+ PEGVITREEFDQLKSKFDAQVE LKARC+ K STFDDGDLG
Subjt:  SEDRAACDE---VREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

TrEMBL top hitse value%identityAlignment
A0A6J1CS66 uncharacterized protein LOC1110138251.5e-1588.46Show/hide
Query:  REVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        ++ ESSYNPIT EGVITREEFDQLKSKFDAQVEALKARC+KK STFDDGDLG
Subjt:  REVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

A0A6J1DDW5 uncharacterized protein LOC1110196347.3e-2353.15Show/hide
Query:  MCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF---------------TSTQSMRSTLEE--MKMRSTLIR--------------EVESSYNP
        M T+M TME+MY+EMVQAAGA SRSE+R A +++ EQ+                       R  L E   + RS+ +R              + ESSYNP
Subjt:  MCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF---------------TSTQSMRSTLEE--MKMRSTLIR--------------EVESSYNP

Query:  ITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        ITPEGVITREEFDQLKSKFDAQVEALKA+C+KKES+FDDGDLG
Subjt:  ITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

A0A6J1DHB3 uncharacterized protein LOC1110204794.3e-2344.15Show/hide
Query:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR
        QREVGAEV EGQ HE  GTEPL RSARITTPV PPAHPKPSKA                                                         
Subjt:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR

Query:  SEDRAACDEVREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
                                               ESSYNPITP GVITREEFDQLKSKFDAQVEALKARC+KKES+FDDGDLG
Subjt:  SEDRAACDEVREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

A0A6J1DPN4 uncharacterized protein LOC1110230605.6e-2353.33Show/hide
Query:  MESMCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF--------------------TSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVIT
        ME+M T+MRTMEEMYN+MVQ AGA SRS D+   ++V EQ                           S R             ++ ESSYNPI PEGVIT
Subjt:  MESMCTRMRTMEEMYNEMVQAAGAGSRSEDRAACDEVREQKVF--------------------TSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVIT

Query:  REEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        REEF+QLKSKFDAQVEALK RC+KKES FDDGDLG
Subjt:  REEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

A0A6J1DZJ1 uncharacterized protein LOC1110257381.4e-6171.73Show/hide
Query:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR
        QREVGAEV EGQ+HE  GTEP  RSARITTP   PAHPKP KANRGRGGASRRTT GAAPAP+RENFDALQKEME+M T+M TMEEMYNEMVQA GAGSR
Subjt:  QREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSR

Query:  SEDRAACDE---VREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG
        SEDRAA DE   +R+      + S+R             ++ ESSYNP+ PEGVITREEFDQLKSKFDAQVE LKARC+ K STFDDGDLG
Subjt:  SEDRAACDE---VREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGGGAGGTCGGGGCAGAAGTGGCAGAGGGCCAGGTTCATGAAAGCCATGGGACTGAGCCGCTCCATAGGTCGGCACGCATCACCACGCCCGTTTTTCCA
CCGGCACATCCAAAACCGTCTAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGAACCACTCGAGGAGCAGCCCCAGCTCCTACTAGAGAGAATTTTGATGCA
CTCCAGAAAGAAATGGAGTCAATGTGCACCAGAATGCGCACTATGGAAGAGATGTACAACGAAATGGTGCAAGCTGCAGGTGCTGGGTCTCGATCTGAAGACCGG
GCGGCGTGCGACGAGGTGCGCGAGCAAAAGGTCTTCACCTCAACCCAGTCGATGAGGAGCACCCTGGAGGAGATGAAGATGAGGAGTACACTCATCAGAGAGGTC
GAATCTTCTTACAACCCGATAACTCCCGAGGGAGTGATCACAAGGGAGGAGTTCGACCAGCTTAAGAGCAAGTTCGATGCTCAGGTTGAAGCTTTGAAGGCTAGG
TGCAAGAAGAAAGAAAGCACGTTCGATGATGGCGACCTGGGAGTGAAGGGATGTGAATCCCGGAGGGGAAACAGATTTTCGTTGCTGATTTTCGGGATACAAAAT
CAAATTTTACAGAAGAAAAATACAGGGGAAATTCTACCTTTGAAGAACGTTTCTTCAACGAGTTTCCCTCGAACACCACCACTATGTCTTCCTTGCTATCCTCTT
GGGTCTCGGGATCGTGCTGGTGGGAGCAACTTGTTTGGAATGTCAGGGAGAGTTAAAGGAGAGCTTGATCGAGAGAAAACTGGAAGAGTTCTTGCTATGTTCTGT
ATTCTGTATTTTCGCAGAACTGCCAAGAAAACAAAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGGGAGGTCGGGGCAGAAGTGGCAGAGGGCCAGGTTCATGAAAGCCATGGGACTGAGCCGCTCCATAGGTCGGCACGCATCACCACGCCCGTTTTTCCA
CCGGCACATCCAAAACCGTCTAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGAACCACTCGAGGAGCAGCCCCAGCTCCTACTAGAGAGAATTTTGATGCA
CTCCAGAAAGAAATGGAGTCAATGTGCACCAGAATGCGCACTATGGAAGAGATGTACAACGAAATGGTGCAAGCTGCAGGTGCTGGGTCTCGATCTGAAGACCGG
GCGGCGTGCGACGAGGTGCGCGAGCAAAAGGTCTTCACCTCAACCCAGTCGATGAGGAGCACCCTGGAGGAGATGAAGATGAGGAGTACACTCATCAGAGAGGTC
GAATCTTCTTACAACCCGATAACTCCCGAGGGAGTGATCACAAGGGAGGAGTTCGACCAGCTTAAGAGCAAGTTCGATGCTCAGGTTGAAGCTTTGAAGGCTAGG
TGCAAGAAGAAAGAAAGCACGTTCGATGATGGCGACCTGGGAGTGAAGGGATGTGAATCCCGGAGGGGAAACAGATTTTCGTTGCTGATTTTCGGGATACAAAAT
CAAATTTTACAGAAGAAAAATACAGGGGAAATTCTACCTTTGAAGAACGTTTCTTCAACGAGTTTCCCTCGAACACCACCACTATGTCTTCCTTGCTATCCTCTT
GGGTCTCGGGATCGTGCTGGTGGGAGCAACTTGTTTGGAATGTCAGGGAGAGTTAAAGGAGAGCTTGATCGAGAGAAAACTGGAAGAGTTCTTGCTATGTTCTGT
ATTCTGTATTTTCGCAGAACTGCCAAGAAAACAAAACAGTAA
Protein sequenceShow/hide protein sequence
MQREVGAEVAEGQVHESHGTEPLHRSARITTPVFPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMESMCTRMRTMEEMYNEMVQAAGAGSRSEDR
AACDEVREQKVFTSTQSMRSTLEEMKMRSTLIREVESSYNPITPEGVITREEFDQLKSKFDAQVEALKARCKKKESTFDDGDLGVKGCESRRGNRFSLLIFGIQN
QILQKKNTGEILPLKNVSSTSFPRTPPLCLPCYPLGSRDRAGGSNLFGMSGRVKGELDREKTGRVLAMFCILYFRRTAKKTKQ