; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g23700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g23700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionnuclear transcription factor Y subunit B-9
Genome locationchr10:17030765..17035691
RNA-Seq ExpressionMoc10g23700
SyntenyMoc10g23700
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003956 - Transcription factor, NFYB/HAP3, conserved site
IPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065753.1 nuclear transcription factor Y subunit B-9 [Cucumis melo var. makuwa]1.4e-6696.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

TYK13777.1 nuclear transcription factor Y subunit B-9 [Cucumis melo var. makuwa]1.4e-6696.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

XP_008449191.1 PREDICTED: nuclear transcription factor Y subunit B-9 [Cucumis melo]1.4e-6696.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

XP_031738736.1 nuclear transcription factor Y subunit B-9-like [Cucumis sativus]1.4e-6696.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

XP_038905819.1 nuclear transcription factor Y subunit B-9-like [Benincasa hispida]1.6e-6797.73Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+PPYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

TrEMBL top hitse value%identityAlignment
A0A1S3BKV5 nuclear transcription factor Y subunit B-96.6e-6796.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

A0A5A7VC19 Nuclear transcription factor Y subunit B-96.6e-6796.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

A0A5D3CPF3 Nuclear transcription factor Y subunit B-96.6e-6796.97Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+ PYGQAFQIGHVPAGMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

A0A6J1KTC3 nuclear transcription factor Y subunit B-3-like isoform X24.3e-6695.45Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRE ESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+PPYGQ FQIGHVP GMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

A0A6J1KV71 nuclear transcription factor Y subunit B-9-like isoform X14.3e-6695.45Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS
        MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRE ESDRIRTEPILRR+
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRS

Query:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG
        +DYGPQVGM+PPYGQ FQIGHVP GMFDAMGG
Subjt:  MDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGG

SwissProt top hitse value%identityAlignment
O23310 Nuclear transcription factor Y subunit B-39.6e-3164.52Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRT
        +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT+  +D+LWAM  LGF+DY+EPL V+L +YRE E ++  T
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRT

Q69J40 Nuclear transcription factor Y subunit B-108.1e-3064.44Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
        +PIANV RIM+R LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT+  +D+LWAM  LGF+DYI+PL ++L+++RE E ++
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR

Q84W66 Nuclear transcription factor Y subunit B-61.0e-4088.89Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
        MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR

Q9FGJ3 Nuclear transcription factor Y subunit B-26.2e-3064.44Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
        +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR

Q9SFD8 Nuclear transcription factor Y subunit B-91.4e-4263.09Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR---IRTE-PI
        MPIANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+LWAM KLGFD+Y++PLTVF+NRYRE E+DR   +R E P 
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR---IRTE-PI

Query:  LRRSMD------YGPQVGMLPP----YGQAFQIGHVPAGMFDAMGGSAR
        LR++        +GP  G+ PP    YG   Q   +  G +   G S +
Subjt:  LRRSMD------YGPQVGMLPP----YGQAFQIGHVPAGMFDAMGGSAR

Arabidopsis top hitse value%identityAlignment
AT1G21970.1 Histone superfamily protein1.0e-4363.09Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR---IRTE-PI
        MPIANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+LWAM KLGFD+Y++PLTVF+NRYRE E+DR   +R E P 
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR---IRTE-PI

Query:  LRRSMD------YGPQVGMLPP----YGQAFQIGHVPAGMFDAMGGSAR
        LR++        +GP  G+ PP    YG   Q   +  G +   G S +
Subjt:  LRRSMD------YGPQVGMLPP----YGQAFQIGHVPAGMFDAMGGSAR

AT4G14540.1 nuclear factor Y, subunit B36.8e-3264.52Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRT
        +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT+  +D+LWAM  LGF+DY+EPL V+L +YRE E ++  T
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRT

AT5G47640.1 nuclear factor Y, subunit B24.4e-3164.44Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
        +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR

AT5G47670.1 nuclear factor Y, subunit B67.3e-4288.89Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
        MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR

AT5G47670.2 nuclear factor Y, subunit B67.3e-4288.89Show/hide
Query:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
        MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Subjt:  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATCGCCAACGTGATACGCATCATGCGGCGGATCTTACCCTCCCATGCAAAGATATCCGACGATGCCAAGGAGACCATCCAAGAGTGTGTGTCGGAGTACATTAG
CTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGAGAGCAGCGCAAGACGGTGACGGCGGAGGACGTCCTTTGGGCCATGGGGAAGCTTGGCTTCGACGACTACATCG
AGCCACTCACCGTGTTCCTCAACCGCTACCGGGAGTCAGAGAGCGATCGAATCCGAACGGAGCCAATCTTGAGGCGCAGTATGGATTATGGGCCGCAAGTGGGGATGCTA
CCGCCGTACGGGCAGGCGTTTCAAATAGGGCACGTGCCAGCGGGGATGTTCGATGCAATGGGCGGGTCGGCACGCATCACCACACTTGTTCTGCCACCAGCACATCATAA
ACCGACTAAGGCCAATCGTGGCCGAGGTGGTGCCTCCAGGAGAACCACTCGAGCTCCATCTCTAGCTCCTACTAAGGAGAATTTTGATGTCCTCCATAAAGAAATGGAGG
CAATGCACACCCAGATGCGCACCATGGAAGAGATGTATAATGAAATGGTGCAGGCTTTTGGTGTCAGGTCTCGATTAGAAGACCAAGTGGTGCACGAAGAAGTGCACAAG
CAAGAGGATCTCCACCTCAACCAATCAACGAAGAGTACCCTAGAGGCGATGAAAATGTGGAGTACAGTCGCCAGAAGAACGATTCGTGACCATCTTAACAGAAAGAGAAG
CTCGTCCCACCGAGGAGGACGAACTCCAACATGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTATAACCTAATAGTTCCTGAGGGAATTATTACGAGGGAGG
AGTTCGACCAGCTCAAGAGCAAATTTGATGCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGATCGCCAACGTGATACGCATCATGCGGCGGATCTTACCCTCCCATGCAAAGATATCCGACGATGCCAAGGAGACCATCCAAGAGTGTGTGTCGGAGTACATTAG
CTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGAGAGCAGCGCAAGACGGTGACGGCGGAGGACGTCCTTTGGGCCATGGGGAAGCTTGGCTTCGACGACTACATCG
AGCCACTCACCGTGTTCCTCAACCGCTACCGGGAGTCAGAGAGCGATCGAATCCGAACGGAGCCAATCTTGAGGCGCAGTATGGATTATGGGCCGCAAGTGGGGATGCTA
CCGCCGTACGGGCAGGCGTTTCAAATAGGGCACGTGCCAGCGGGGATGTTCGATGCAATGGGCGGGTCGGCACGCATCACCACACTTGTTCTGCCACCAGCACATCATAA
ACCGACTAAGGCCAATCGTGGCCGAGGTGGTGCCTCCAGGAGAACCACTCGAGCTCCATCTCTAGCTCCTACTAAGGAGAATTTTGATGTCCTCCATAAAGAAATGGAGG
CAATGCACACCCAGATGCGCACCATGGAAGAGATGTATAATGAAATGGTGCAGGCTTTTGGTGTCAGGTCTCGATTAGAAGACCAAGTGGTGCACGAAGAAGTGCACAAG
CAAGAGGATCTCCACCTCAACCAATCAACGAAGAGTACCCTAGAGGCGATGAAAATGTGGAGTACAGTCGCCAGAAGAACGATTCGTGACCATCTTAACAGAAAGAGAAG
CTCGTCCCACCGAGGAGGACGAACTCCAACATGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTATAACCTAATAGTTCCTGAGGGAATTATTACGAGGGAGG
AGTTCGACCAGCTCAAGAGCAAATTTGATGCAAGTTGA
Protein sequenceShow/hide protein sequence
MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGML
PPYGQAFQIGHVPAGMFDAMGGSARITTLVLPPAHHKPTKANRGRGGASRRTTRAPSLAPTKENFDVLHKEMEAMHTQMRTMEEMYNEMVQAFGVRSRLEDQVVHEEVHK
QEDLHLNQSTKSTLEAMKMWSTVARRTIRDHLNRKRSSSHRGGRTPTCSHKNSNQQAESSYNLIVPEGIITREEFDQLKSKFDAS