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Moc10g24100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g24100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:17294506..17298688
RNA-Seq ExpressionMoc10g24100
SyntenyMoc10g24100
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.1e-6676.11Show/hide
Query:  MRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AAGA SR ENRV R D+ EQRG HLGP ++  PE  E E +THQRGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL
         TP GVITREEFDQL+ K DAQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IPLKFK PT+KPYDGS+DPKDYVE+
Subjt:  ATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]7.4e-5097.25Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGS

Query:  RDPKDYVEL
        RDPKDYVE+
Subjt:  RDPKDYVEL

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]1.2e-4475.19Show/hide
Query:  DNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDV
        + E E +THQRGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITREEFDQL+ K DAQVEALKA CE+KE S +DGDLGE PFT D+
Subjt:  DNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDV

Query:  LEAPIPLKFKAPTVKPYDGSRDPKDYVEL
        LEAPI  KFK PT+KPYDGS++PKDYV++
Subjt:  LEAPIPLKFKAPTVKPYDGSRDPKDYVEL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]3.7e-4961.2Show/hide
Query:  MEAMRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRTQMR+MEEMYN+M+  AGA SR  ++V   DV EQ   H  P +EE           H  GDLR+HLN+KR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL
        +NP  P GVITREEF+QL+ K DAQVEALK +CE+KE + +DGDLGESPFTSD+LEA IP KFK PT+K YDGS+DPKDYVE+
Subjt:  HNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]5.6e-8262.59Show/hide
Query:  MVQPANSTNTAARRTLAASDAHQREVGAAAVEGQGHDGLATEPLCRSARITAPVLPPAHPRTSKATRGRGGTSKKGT------STSENFDALQREMEAMR
        MVQP +STNT  RR L A+D HQREVGA  VEGQ H+GL TEP CRSARIT P L PAHP+  KA RGRGG S++ T       + ENFDALQ+EMEAMR
Subjt:  MVQPANSTNTAARRTLAASDAHQREVGAAAVEGQGHDGLATEPLCRSARITAPVLPPAHPRTSKATRGRGGTSKKGT------STSENFDALQREMEAMR

Query:  TQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A GAGSR E+R  R                             +RGDLR+HL++KR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL
        P GVITREEFDQL+ K DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDGS+DPKDYVE+
Subjt:  PAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198423.6e-5097.25Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGS

Query:  RDPKDYVEL
        RDPKDYVE+
Subjt:  RDPKDYVEL

A0A6J1DDW5 uncharacterized protein LOC1110196345.5e-6776.11Show/hide
Query:  MRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AAGA SR ENRV R D+ EQRG HLGP ++  PE  E E +THQRGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL
         TP GVITREEFDQL+ K DAQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IPLKFK PT+KPYDGS+DPKDYVE+
Subjt:  ATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL

A0A6J1DM55 uncharacterized protein LOC1110222675.9e-4575.19Show/hide
Query:  DNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDV
        + E E +THQRGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITREEFDQL+ K DAQVEALKA CE+KE S +DGDLGE PFT D+
Subjt:  DNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDV

Query:  LEAPIPLKFKAPTVKPYDGSRDPKDYVEL
        LEAPI  KFK PT+KPYDGS++PKDYV++
Subjt:  LEAPIPLKFKAPTVKPYDGSRDPKDYVEL

A0A6J1DPN4 uncharacterized protein LOC1110230601.8e-4961.2Show/hide
Query:  MEAMRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRTQMR+MEEMYN+M+  AGA SR  ++V   DV EQ   H  P +EE           H  GDLR+HLN+KR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL
        +NP  P GVITREEF+QL+ K DAQVEALK +CE+KE + +DGDLGESPFTSD+LEA IP KFK PT+K YDGS+DPKDYVE+
Subjt:  HNPATPAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL

A0A6J1DZJ1 uncharacterized protein LOC1110257382.7e-8262.59Show/hide
Query:  MVQPANSTNTAARRTLAASDAHQREVGAAAVEGQGHDGLATEPLCRSARITAPVLPPAHPRTSKATRGRGGTSKKGT------STSENFDALQREMEAMR
        MVQP +STNT  RR L A+D HQREVGA  VEGQ H+GL TEP CRSARIT P L PAHP+  KA RGRGG S++ T       + ENFDALQ+EMEAMR
Subjt:  MVQPANSTNTAARRTLAASDAHQREVGAAAVEGQGHDGLATEPLCRSARITAPVLPPAHPRTSKATRGRGGTSKKGT------STSENFDALQREMEAMR

Query:  TQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A GAGSR E+R  R                             +RGDLR+HL++KR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAAGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL
        P GVITREEFDQL+ K DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDGS+DPKDYVE+
Subjt:  PAGVITREEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCCGCAAACTCGACCAATACGGCAGCCCGAAGGACCCTAGCTGCTAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGCGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAACAGAACCCCTCTGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCGCCTGCGCACCCGAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCACTTCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAAATGATACTAGCT
GCAGGCGCAGGGTCCCGATTTGAAAATCGAGTGACGCGTGTGGATGTACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGCCGAGGAGGAACGTCCCGAAGACAACGAGAG
CGAGGGACACACTCACCAGAGGGGAGACCTCCGTGAGCATCTCAACAAAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACC
AGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGCAAGCTCGATGCTCAGGTGGAGGCCTTAAAAGCC
AAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCTGAAGTTCAAAGCTCCTACCGT
GAAGCCTTATGATGGGTCGAGGGACCCCAAGGACTATGTTGAGTTAGCATCGGCGTACGAGACCGACCTGGCCAGGTCGGTCCCCGTCGAGATCTTAGATAATCCCTCGA
TCTCAGAGCCAGATCTGATGGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAGATCCCAAGGAGCGCAGAAAG
TTGGCAAGGCGAGCAACTCGGTTCGTGGTCCGAAGTGGAGTATTGTACCGACGCGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGAAGAGGGCCTGCGCGACCT
CAAAGGTAAGAGGTGCGAGGTGACATTGGCTGCAGTTCAAGGAAAAAGCAAAGAAAGGAAAGATGTTGCCAACACCAAAGTAAAAACGAACAAAGCTTCTTCATTAATGG
AGAGCAGAGCCAAGGCTTATAGACCTTGCAGCTCTGCCCTGACACTTGCAAACAAAGAAGAAGAGAAGAAAGACAGAGAAAGGCCTCATGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCCGCAAACTCGACCAATACGGCAGCCCGAAGGACCCTAGCTGCTAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGCGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAACAGAACCCCTCTGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCGCCTGCGCACCCGAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCACTTCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAAATGATACTAGCT
GCAGGCGCAGGGTCCCGATTTGAAAATCGAGTGACGCGTGTGGATGTACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGCCGAGGAGGAACGTCCCGAAGACAACGAGAG
CGAGGGACACACTCACCAGAGGGGAGACCTCCGTGAGCATCTCAACAAAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACC
AGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGCAAGCTCGATGCTCAGGTGGAGGCCTTAAAAGCC
AAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCTGAAGTTCAAAGCTCCTACCGT
GAAGCCTTATGATGGGTCGAGGGACCCCAAGGACTATGTTGAGTTAGCATCGGCGTACGAGACCGACCTGGCCAGGTCGGTCCCCGTCGAGATCTTAGATAATCCCTCGA
TCTCAGAGCCAGATCTGATGGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAGATCCCAAGGAGCGCAGAAAG
TTGGCAAGGCGAGCAACTCGGTTCGTGGTCCGAAGTGGAGTATTGTACCGACGCGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGAAGAGGGCCTGCGCGACCT
CAAAGGTAAGAGGTGCGAGGTGACATTGGCTGCAGTTCAAGGAAAAAGCAAAGAAAGGAAAGATGTTGCCAACACCAAAGTAAAAACGAACAAAGCTTCTTCATTAATGG
AGAGCAGAGCCAAGGCTTATAGACCTTGCAGCTCTGCCCTGACACTTGCAAACAAAGAAGAAGAGAAGAAAGACAGAGAAAGGCCTCATGAAGGATGA
Protein sequenceShow/hide protein sequence
MVQPANSTNTAARRTLAASDAHQREVGAAAVEGQGHDGLATEPLCRSARITAPVLPPAHPRTSKATRGRGGTSKKGTSTSENFDALQREMEAMRTQMRSMEEMYNEMILA
AGAGSRFENRVTRVDVREQRGSHLGPAEEERPEDNESEGHTHQRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKA
KCEQKEGSLNDGDLGESPFTSDVLEAPIPLKFKAPTVKPYDGSRDPKDYVELASAYETDLARSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIRGNSPQDPKERRK
LARRATRFVVRSGVLYRRGFSLPLLRCLTPEEGLRDLKGKRCEVTLAAVQGKSKERKDVANTKVKTNKASSLMESRAKAYRPCSSALTLANKEEEKKDRERPHEG