; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g24700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g24700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA-binding protein pno1
Genome locationchr10:17779110..17786250
RNA-Seq ExpressionMoc10g24700
SyntenyMoc10g24700
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015597.1 RNA-binding protein pno1 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-5791.27Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVE VSTE+K VV  LPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKK+WMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

XP_022143460.1 RNA-binding protein pno1 [Momordica charantia]2.2e-62100Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

XP_022932417.1 RNA-binding protein pno1 [Cucurbita moschata]9.4e-5891.27Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVE VSTE+K VV  LPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKK+WMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

XP_023005535.1 RNA-binding protein pno1-like isoform X1 [Cucurbita maxima]1.2e-5792.06Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVEAVST+ K VV  LPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKK+WMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

XP_023540523.1 RNA-binding protein pno1-like isoform X1 [Cucurbita pepo subsp. pepo]2.1e-5791.27Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVEAVST+ K VV  LPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKK+WMEIYTP+YEQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

TrEMBL top hitse value%identityAlignment
A0A1S3BLP2 RNA-binding protein pno11.3e-5789.68Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVE +ST++K VV  LPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKK+WMEIYTP+Y+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

A0A6J1CNV4 RNA-binding protein pno11.0e-62100Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

A0A6J1EWL7 RNA-binding protein pno14.6e-5891.27Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVE VSTE+K VV  LPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKK+WMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

A0A6J1GHF0 RNA-binding protein pno1-like isoform X12.3e-5790.48Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVEAVS++ K VV  LPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKK+WMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDA+ALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

A0A6J1KXN9 RNA-binding protein pno1-like isoform X16.0e-5892.06Show/hide
Query:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQS E STSMEVEAVST+ K VV  LPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKK+WMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLR
        NLQKCADFVHAFMLGFDVIDAIALLR
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLR

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno11.6e-2347.41Show/hide
Query:  EVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
        E E  + ES+A       +P F P+K  ++  G+ + RK+ VP HRY+PLK++WM+I+TPV E +K+ IR NL +R VE++   +T DI  +QK ADFV 
Subjt:  EVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH

Query:  AFMLGFDVIDAIALLR
        AF+LGF+V DA+AL+R
Subjt:  AFMLGFDVIDAIALLR

Q29IG6 RNA-binding protein pno13.2e-2466.67Show/hide
Query:  QFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR
        + RKVSVPPHRYS LK+ WM+I+TPV E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR
Subjt:  QFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR

Q5F414 RNA-binding protein PNO12.1e-2350Show/hide
Query:  STESKAVVGALPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML
        + ES    G  P K P F PL    +  G+ + RKV VP +RY+PLK++WM+I+TP+ E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+L
Subjt:  STESKAVVGALPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML

Query:  GFDVIDAIALLR
        GF V DA+AL+R
Subjt:  GFDVIDAIALLR

Q6VBQ8 RNA-binding protein PNO11.7e-2251.02Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR
        +P F PL   ++  G+ + RK+ VP +RY+PLK++WM+I+TP+ E + + IR NLK+R VE++T  DT D+S L K ADFV AF+LGF V DA+AL+R
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR

Q9VR89 RNA-binding protein pno18.4e-2561.11Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR
        P +    R + RKVSVPPHRYS LK+ WM+I+TPV E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein2.3e-4675.83Show/hide
Query:  STSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA
        ST MEVE   T ++  V  LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKK+W++IYTP+Y+QMK+DIRMNLKARKVELKTRADTPDISNLQK A
Subjt:  STSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA

Query:  DFVHAFMLGFDVIDAIALLR
        DFVHAFMLGFD+ DAI+LLR
Subjt:  DFVHAFMLGFDVIDAIALLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGATTGAAGTCTCCACTTCCATGGAAGTGGAAGCAGTTTCAACTGAATCGAAAGCTGTAGTTGGCGCCTTGCCACCGAAACCACAGTTTGATCCTCTAAAGCC
TCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCAGTTCCTCCTCACCGCTATTCTCCTCTCAAGAAATCATGGATGGAGATTTACACCCCAGTATATGAGC
AGATGAAAATCGATATCCGAATGAATCTCAAGGCCCGTAAAGTCGAACTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCAT
GCCTTCATGCTCGGTTTCGATGTGATCGATGCCATTGCGCTCTTACGGTGGACGAACTCTATGTCGAATCTTTTGAGATCAAAGATGTTAAAACTCTCCGAGGCGAGCAC
TTATCCCCAAATTATCAACTGGGGTTCCATCGATGGGCCAAGATTTGATGGACCTAGGATGCAGGTTGGAGTGTACTGTCGAACTTCATCGGACGATCTTCTCTTCTCCC
CTACGATGAATGGGTCTCTTTGTGTAGACCGGTTTCTTGTCTATGACCTTACCTTTGTCCTTTTTGGAGGATCCTGCCAGGACCATGATGATTCTTTGTCCGATGACCAT
GATGATTCTTTATCCCCGAGGGAGGACTGGTCCAGGGTGGTGTGGCCACCACTTTGGCCCGCATGCATGAGTTCTTCCTCTAGGGCTCCCCCATACTTCTTTTACACAGG
TGGCCCATGGGGTGTGAGAGCCAACCAAGGAGCATGCCTGTGCTTTAATGATGTTACAGCATCAGCTCCAGAAAGAGACAAAAAGCAGCAAGCTAGCAAAATCGACTTTA
TCTTTGATCTTGTGGAAGCCGTCCTTGAAAACTCCGAATCCGAAGAGCAATCCGACGGCGACGGCGACCGCGATGAGGCAGACGCAGAGCATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGATTGAAGTCTCCACTTCCATGGAAGTGGAAGCAGTTTCAACTGAATCGAAAGCTGTAGTTGGCGCCTTGCCACCGAAACCACAGTTTGATCCTCTAAAGCC
TCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCAGTTCCTCCTCACCGCTATTCTCCTCTCAAGAAATCATGGATGGAGATTTACACCCCAGTATATGAGC
AGATGAAAATCGATATCCGAATGAATCTCAAGGCCCGTAAAGTCGAACTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCAT
GCCTTCATGCTCGGTTTCGATGTGATCGATGCCATTGCGCTCTTACGGTGGACGAACTCTATGTCGAATCTTTTGAGATCAAAGATGTTAAAACTCTCCGAGGCGAGCAC
TTATCCCCAAATTATCAACTGGGGTTCCATCGATGGGCCAAGATTTGATGGACCTAGGATGCAGGTTGGAGTGTACTGTCGAACTTCATCGGACGATCTTCTCTTCTCCC
CTACGATGAATGGGTCTCTTTGTGTAGACCGGTTTCTTGTCTATGACCTTACCTTTGTCCTTTTTGGAGGATCCTGCCAGGACCATGATGATTCTTTGTCCGATGACCAT
GATGATTCTTTATCCCCGAGGGAGGACTGGTCCAGGGTGGTGTGGCCACCACTTTGGCCCGCATGCATGAGTTCTTCCTCTAGGGCTCCCCCATACTTCTTTTACACAGG
TGGCCCATGGGGTGTGAGAGCCAACCAAGGAGCATGCCTGTGCTTTAATGATGTTACAGCATCAGCTCCAGAAAGAGACAAAAAGCAGCAAGCTAGCAAAATCGACTTTA
TCTTTGATCTTGTGGAAGCCGTCCTTGAAAACTCCGAATCCGAAGAGCAATCCGACGGCGACGGCGACCGCGATGAGGCAGACGCAGAGCATGCATAG
Protein sequenceShow/hide protein sequence
MQSIEVSTSMEVEAVSTESKAVVGALPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
AFMLGFDVIDAIALLRWTNSMSNLLRSKMLKLSEASTYPQIINWGSIDGPRFDGPRMQVGVYCRTSSDDLLFSPTMNGSLCVDRFLVYDLTFVLFGGSCQDHDDSLSDDH
DDSLSPREDWSRVVWPPLWPACMSSSSRAPPYFFYTGGPWGVRANQGACLCFNDVTASAPERDKKQQASKIDFIFDLVEAVLENSESEEQSDGDGDRDEADAEHA