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Moc10g25430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g25430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr10:18423295..18425288
RNA-Seq ExpressionMoc10g25430
SyntenyMoc10g25430
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152233.1 uncharacterized protein LOC111020002 [Momordica charantia]1.5e-0671.74Show/hide
Query:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        QVPRS+NSNADAL +LASAYET+L R VPVEIL   SI  PE+ME+
Subjt:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

XP_022156792.1 uncharacterized protein LOC111023626 [Momordica charantia]3.4e-1182.98Show/hide
Query:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +QVPRSKNSNADAL RLASAYET+LPR VPVEIL ESSID+PEI+E+
Subjt:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]3.8e-1074.47Show/hide
Query:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +QVPRS+NSNAD L RLASAY+T+LPR VPVEIL ESS+D+PE+ME+
Subjt:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

XP_022158092.1 uncharacterized protein LOC111024661 [Momordica charantia]1.1e-0669.57Show/hide
Query:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        QVPRS+NSNADAL +LASAYET+L R VPVEIL   SI +P++ME+
Subjt:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

XP_022158215.1 uncharacterized protein LOC111024751 [Momordica charantia]4.9e-1080.43Show/hide
Query:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +VPRS+NSNADAL  LASAYET+LPR VPVEILVESSID+PEIM++
Subjt:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H7.2e-0767.39Show/hide
Query:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +VPR++NSNADAL +LASAYETNL R VPVEIL   SI  P++ME+
Subjt:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

A0A6J1DSX0 uncharacterized protein LOC1110236261.6e-1182.98Show/hide
Query:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +QVPRSKNSNADAL RLASAYET+LPR VPVEIL ESSID+PEI+E+
Subjt:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

A0A6J1DV78 Ribonuclease H2.4e-1080.43Show/hide
Query:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +VPRS+NSNADAL  LASAYET+LPR VPVEILVESSID+PEIM++
Subjt:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

A0A6J1DWA1 Ribonuclease H5.5e-0769.57Show/hide
Query:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        QVPRS+NSNADAL +LASAYET+L R VPVEIL   SI +P++ME+
Subjt:  QVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

A0A6J1DWM2 Ribonuclease H1.8e-1074.47Show/hide
Query:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV
        +QVPRS+NSNAD L RLASAY+T+LPR VPVEIL ESS+D+PE+ME+
Subjt:  KQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATTGAGGCAGAGCTCAGCCGCGTCACTCTAGCAGAAGAGCCAGAACTTGTCCCTTTGATGGGACTTGATAAGCAGGTGCCGAGGTCAAAAAACTCCAAC
GCCGATGCATTGACACGCTTAGCCTCGGCCTACGAAACCAACCTGCCAAGAATAGTGCCAGTTGAAATACTTGTCGAGTCATCCATCGACCGACCTGAGATAATG
GAGGTCCAGTTAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGATTGAGGCAGAGCTCAGCCGCGTCACTCTAGCAGAAGAGCCAGAACTTGTCCCTTTGATGGGACTTGATAAGCAGGTGCCGAGGTCAAAAAACTCCAAC
GCCGATGCATTGACACGCTTAGCCTCGGCCTACGAAACCAACCTGCCAAGAATAGTGCCAGTTGAAATACTTGTCGAGTCATCCATCGACCGACCTGAGATAATG
GAGGTCCAGTTAGATTAG
Protein sequenceShow/hide protein sequence
MPIEAELSRVTLAEEPELVPLMGLDKQVPRSKNSNADALTRLASAYETNLPRIVPVEILVESSIDRPEIMEVQLD