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Moc10g25630 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g25630
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description(-)-germacrene D synthase-like isoform X1
Genome locationchr10:18548338..18552921
RNA-Seq ExpressionMoc10g25630
SyntenyMoc10g25630
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005630 - Terpene synthase, metal-binding domain
IPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143456.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]1.3e-4084.31Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KEL EFS    R WKDLKLMEQFSFARDR+VECYFW LGIY+EPKYSNAR IL+KVIAF SLLDDM DAYATLDELQLFTDAIERWDINGIDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        PN
Subjt:  PN

XP_022143457.1 (-)-germacrene D synthase-like isoform X2 [Momordica charantia]1.3e-4084.31Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KEL EFS    R WKDLKLMEQFSFARDR+VECYFW LGIY+EPKYSNAR IL+KVIAF SLLDDM DAYATLDELQLFTDAIERWDINGIDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        PN
Subjt:  PN

XP_022143458.1 (-)-germacrene D synthase-like isoform X3 [Momordica charantia]1.3e-4084.31Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KEL EFS    R WKDLKLMEQFSFARDR+VECYFW LGIY+EPKYSNAR IL+KVIAF SLLDDM DAYATLDELQLFTDAIERWDINGIDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        PN
Subjt:  PN

XP_022143529.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]2.1e-3373.53Show/hide
Query:  MRKLYRKELAEFSRSVARLW-KDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDK
        ++KLY+KELAE SR     W KD KLME  SFAR+R+VECYFWALG+++EPKYS AR IL+K+I F S LDDMYD YA LDELQLFTDAIERWDINGIDK
Subjt:  MRKLYRKELAEFSRSVARLW-KDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDK

Query:  LP
        LP
Subjt:  LP

XP_022143531.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]4.6e-3372.55Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KELAE    V+R  KD KLME  SFAR+R+VECYFWALG+++EPKYS AR IL+K I F S LDDMYD YATLDELQLFTDAIERWDIN IDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        P+
Subjt:  PN

TrEMBL top hitse value%identityAlignment
A0A6J1CPK3 (-)-germacrene D synthase-like isoform X11.0e-3373.53Show/hide
Query:  MRKLYRKELAEFSRSVARLW-KDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDK
        ++KLY+KELAE SR     W KD KLME  SFAR+R+VECYFWALG+++EPKYS AR IL+K+I F S LDDMYD YA LDELQLFTDAIERWDINGIDK
Subjt:  MRKLYRKELAEFSRSVARLW-KDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDK

Query:  LP
        LP
Subjt:  LP

A0A6J1CQA8 (-)-germacrene D synthase-like isoform X16.5e-4184.31Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KEL EFS    R WKDLKLMEQFSFARDR+VECYFW LGIY+EPKYSNAR IL+KVIAF SLLDDM DAYATLDELQLFTDAIERWDINGIDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        PN
Subjt:  PN

A0A6J1CQI9 (-)-germacrene D synthase-like isoform X12.2e-3372.55Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KELAE    V+R  KD KLME  SFAR+R+VECYFWALG+++EPKYS AR IL+K I F S LDDMYD YATLDELQLFTDAIERWDIN IDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        P+
Subjt:  PN

A0A6J1CQS0 (-)-germacrene D synthase-like isoform X36.5e-4184.31Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KEL EFS    R WKDLKLMEQFSFARDR+VECYFW LGIY+EPKYSNAR IL+KVIAF SLLDDM DAYATLDELQLFTDAIERWDINGIDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        PN
Subjt:  PN

A0A6J1CQW1 (-)-germacrene D synthase-like isoform X26.5e-4184.31Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KLY+KEL EFS    R WKDLKLMEQFSFARDR+VECYFW LGIY+EPKYSNAR IL+KVIAF SLLDDM DAYATLDELQLFTDAIERWDINGIDKL
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        PN
Subjt:  PN

SwissProt top hitse value%identityAlignment
O65323 5-epiaristolochene synthase7.2e-2955.88Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++ L+++ELAE    V+R WKDL  +    +ARDR+VECYFWALG+Y+EP+YS AR +L+K IA  S++DD YDAY T+DEL ++TD I+RWDI  ID L
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        P+
Subjt:  PN

Q6Q3H3 (-)-germacrene D synthase1.2e-2856.44Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++KL++KEL++    ++  WKDL    +  FARDR+VECYFW LG+Y EP++  AR IL KVIA TS++DD+YD Y TL+EL+LFT+A+ERWDI+ ID+L
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  P
        P
Subjt:  P

Q84LF0 5-epi-aristolochene synthase 23.6e-2854.9Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++ L+++ELAE    V+R WKDL  +    +ARDR+VECYFWALG+Y EP+YS AR +L+K I+  S++DD +DAY T+ EL+ +TDAI+RWDIN ID+L
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        P+
Subjt:  PN

Q84LF1 5-epi-aristolochene synthase 14.7e-2854.9Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++ L+++ELAE    V+R WKDL  +    +ARDR+VECYFWALG+Y EP+YS AR +L+K I+  S++DD +DAY T+ EL+ +TDAI+RWDIN ID+L
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  PN
        P+
Subjt:  PN

Q84LF2 5-epi-aristolochene synthase 32.1e-2857.58Show/hide
Query:  LYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLPN
        L+++ELAE    V+R WKDL  +    +ARDR+VECYFWALG+Y EP+YS AR IL+K I+  S++DD +DAY T+ EL+ +TDAI+RWDIN ID+LP+
Subjt:  LYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLPN

Arabidopsis top hitse value%identityAlignment
AT2G24210.1 terpene synthase 102.2e-2045.54Show/hide
Query:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL
        ++ ++++EL    ++V+  W +  L +Q  FARDRIVE YFW +G   EP+Y   R  + K+ A  + +DD+YD Y TL+ELQLFT A E WDIN +D+L
Subjt:  MRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKL

Query:  P
        P
Subjt:  P

AT3G25820.1 terpene synthase-like sequence-1,8-cineole1.3e-2048.84Show/hide
Query:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLP
        V+R WKD  L  Q  F RDRIVE YFW +G+ +EP++   R I+  V A  + +DD+YD Y TL+EL+LFT  +E WD+N + +LP
Subjt:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLP

AT3G25820.2 terpene synthase-like sequence-1,8-cineole1.3e-2048.84Show/hide
Query:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLP
        V+R WKD  L  Q  F RDRIVE YFW +G+ +EP++   R I+  V A  + +DD+YD Y TL+EL+LFT  +E WD+N + +LP
Subjt:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLP

AT3G25830.1 terpene synthase-like sequence-1,8-cineole1.3e-2048.84Show/hide
Query:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLP
        V+R WKD  L  Q  F RDRIVE YFW +G+ +EP++   R I+  V A  + +DD+YD Y TL+EL+LFT  +E WD+N + +LP
Subjt:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLP

AT4G16730.1 terpene synthase 021.0e-2245.98Show/hide
Query:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLPN
        ++  W    LM+Q  F RDRI E YFW +GI++EP++   R IL K+     ++DD+YD Y TL+EL+LFT+ +E+WD+N +++LPN
Subjt:  VARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSLLDDMYDAYATLDELQLFTDAIERWDINGIDKLPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGAATGTTTTGGATCGACCTGGTGGTCGATCATTCCATAGGTCGGGTAACCCCCGGGCTGGCCGCGTGGCGAGAATTCTCAACTCGAAATACAGCGAGA
CAAGACTACAAGTCAAGTCTCAGCAAGGAATATTTTGGGCCCGAATTAATTAGTTGTTCTAGCGATAGGACTTATAATGATGTTAGCTCGGTCGAGAGTGACATG
TCCTACAACTTTGTAAATAGTGAACCCTTTAGTAGCTTTAGTAGGCATTCTTCCAACAGATTGGGTTGCGATAGAGATGGAGGGGCTGGGTGCCCTTCCATAATG
GCCGAGGCTTACTTGGAATCCTTTAGCATTATTGGATGCTCTGCTCGGTTTGTTTGGCCACAGGTTTTGGTGACACTGCAAACAGAACGTGAAAATGCTAAAGGA
TTAGACATGCGTAAACTTTATCGGAAAGAATTGGCTGAATTTTCAAGGTCTGTGGCTAGGTTGTGGAAGGATTTGAAGTTAATGGAACAATTTTCTTTTGCACGA
GATAGAATCGTGGAGTGCTATTTTTGGGCATTGGGAATATATCATGAACCAAAATACTCTAACGCTAGAGGAATATTGATCAAAGTTATTGCTTTCACATCCCTT
CTTGATGATATGTATGATGCATATGCTACACTTGATGAACTTCAACTATTCACCGATGCAATTGAAAGGTGGGATATTAATGGCATTGATAAGCTTCCAAATTCA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGAATGTTTTGGATCGACCTGGTGGTCGATCATTCCATAGGTCGGGTAACCCCCGGGCTGGCCGCGTGGCGAGAATTCTCAACTCGAAATACAGCGAGA
CAAGACTACAAGTCAAGTCTCAGCAAGGAATATTTTGGGCCCGAATTAATTAGTTGTTCTAGCGATAGGACTTATAATGATGTTAGCTCGGTCGAGAGTGACATG
TCCTACAACTTTGTAAATAGTGAACCCTTTAGTAGCTTTAGTAGGCATTCTTCCAACAGATTGGGTTGCGATAGAGATGGAGGGGCTGGGTGCCCTTCCATAATG
GCCGAGGCTTACTTGGAATCCTTTAGCATTATTGGATGCTCTGCTCGGTTTGTTTGGCCACAGGTTTTGGTGACACTGCAAACAGAACGTGAAAATGCTAAAGGA
TTAGACATGCGTAAACTTTATCGGAAAGAATTGGCTGAATTTTCAAGGTCTGTGGCTAGGTTGTGGAAGGATTTGAAGTTAATGGAACAATTTTCTTTTGCACGA
GATAGAATCGTGGAGTGCTATTTTTGGGCATTGGGAATATATCATGAACCAAAATACTCTAACGCTAGAGGAATATTGATCAAAGTTATTGCTTTCACATCCCTT
CTTGATGATATGTATGATGCATATGCTACACTTGATGAACTTCAACTATTCACCGATGCAATTGAAAGGTGGGATATTAATGGCATTGATAAGCTTCCAAATTCA
TGA
Protein sequenceShow/hide protein sequence
MGRMFWIDLVVDHSIGRVTPGLAAWREFSTRNTARQDYKSSLSKEYFGPELISCSSDRTYNDVSSVESDMSYNFVNSEPFSSFSRHSSNRLGCDRDGGAGCPSIM
AEAYLESFSIIGCSARFVWPQVLVTLQTERENAKGLDMRKLYRKELAEFSRSVARLWKDLKLMEQFSFARDRIVECYFWALGIYHEPKYSNARGILIKVIAFTSL
LDDMYDAYATLDELQLFTDAIERWDINGIDKLPNS