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Moc10g26280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g26280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:19233604..19238887
RNA-Seq ExpressionMoc10g26280
SyntenyMoc10g26280
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]6.2e-2147.62Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K YD  TDP+DH++    W D+ GI + I+CR FS TL G   IWF+Q K++SI+ F+E  RAF+TQF GG  + +   YLLT++QKA ES ++++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALK
         + L+
Subjt:  NKALK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.1e-2043.81Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K +D   D +DH+++   WMD+ G+ + +KCR FS TL G A +WFRQ K+ SI+ F+   +AF+TQF+GGR + +   YLLT++Q+A ES  +++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALK
         + L+
Subjt:  NKALK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]3.3e-2250.96Show/hide
Query:  DYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFNN
        +YD   DP+DH+++   W D+  IR+ I+CR FS TL G A  WFRQ K+ SI+ F+E   AF+TQFVGGR + K  TYLLT++QKA ES +E++ RFN 
Subjt:  DYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFNN

Query:  KALK
        + L+
Subjt:  KALK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.8e-2146.67Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K +D  TDP+DH+++   WMD+ G+ + ++CR FS TL G A IWFRQ K+ SI+ F+   RAF+TQFVGGR + +   YLLT++Q+  ES ++++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALK
         + L+
Subjt:  NKALK

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.3e-2148.18Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K +D +T+P+DH+++   WMD+ G+ D I+CR FS TL G A IWFRQ K+ SI+ F+   RAF+TQFVGGR + +   YLLT++Q+  ES  +++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALKNLENL
         + L+ LE L
Subjt:  NKALKNLENL

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166193.0e-2147.62Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K YD  TDP+DH++    W D+ GI + I+CR FS TL G   IWF+Q K++SI+ F+E  RAF+TQF GG  + +   YLLT++QKA ES ++++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALK
         + L+
Subjt:  NKALK

A0A6J1D7D2 uncharacterized protein LOC1110183071.5e-2043.81Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K +D   D +DH+++   WMD+ G+ + +KCR FS TL G A +WFRQ K+ SI+ F+   +AF+TQF+GGR + +   YLLT++Q+A ES  +++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALK
         + L+
Subjt:  NKALK

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-2146.67Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K +D  TDP+DH+++   WMD+ G+ + ++CR FS TL G A IWFRQ K+ SI+ F+   RAF+TQFVGGR + +   YLLT++Q+  ES ++++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALK
         + L+
Subjt:  NKALK

A0A6J1DZ49 uncharacterized protein LOC1110248511.6e-2250.96Show/hide
Query:  DYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFNN
        +YD   DP+DH+++   W D+  IR+ I+CR FS TL G A  WFRQ K+ SI+ F+E   AF+TQFVGGR + K  TYLLT++QKA ES +E++ RFN 
Subjt:  DYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFNN

Query:  KALK
        + L+
Subjt:  KALK

A0A6J1E1E7 uncharacterized protein LOC1110255486.1e-2248.18Show/hide
Query:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN
        K +D +T+P+DH+++   WMD+ G+ D I+CR FS TL G A IWFRQ K+ SI+ F+   RAF+TQFVGGR + +   YLLT++Q+  ES  +++ RFN
Subjt:  KDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFN

Query:  NKALKNLENL
         + L+ LE L
Subjt:  NKALKNLENL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCACAATAAAGATTATGACGATATCACTGATCCCATGGATCATGTAGAATCATTAATCACATGGATGGATCTGCAGGGAATCCGAGATGAGATTAAATGT
CGGGCATTCTCACTGACCCTCATAGGTTGCGCCAATATCTGGTTTCGGCAGTTCAAAAAACAGTCAATTGCTTTGTTTCGAGAATCGACCCGAGCATTCCTAACC
CAATTTGTAGGAGGTCGGGAACAAAAGAAACTAGCTACCTACCTCTTGACTCTTCGCCAAAAGGCCCATGAAAGCTTTCAGGAGTTTATCGTGCGATTCAACAAT
AAGGCTTTAAAGAATTTGGAGAACTTGTTGAGGAGCAGCAAAATACCAGGATTAGAGGAGAAATGTCGGAGCGTTGTTGTGCCAGAGCATGTCAATGTTGGAGCA
TCGCTTGCTACAGAAATTCCTGGGCAGCAGGATAAGGTCCGCCTAACCATGCTTATAAACTGTTCTTTACGCTTCGATACAAGTCTCATCATGACCCAAAAAGCT
ATAGATGAACTCAACTCGACCCCAGGACTAGGGAATATTTTTGTGGACGACTCCGCTAACAACCATGGGTGTAGGGCAGGACTGGTAATTGTTTCTCCAACTGGG
AGTCGTTTGGAAACAGCTCTAAAGGGAAATTCGACAGATACCACGGTTGAGAACAGAAACGCTGACACGCTAGCACAACTAGCCACTACCTACAGAACGAAAGAA
GCACAGGAAATTCCCGTGAAGTTCATTTCAGAGCCAAGCATAAGAATGTCCGAAAGCCTCCTCATGATGATCGTCCCTCAATTAAGTACCTGGATGGATCCCTTG
ATGAAATACATGACAACAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCACAATAAAGATTATGACGATATCACTGATCCCATGGATCATGTAGAATCATTAATCACATGGATGGATCTGCAGGGAATCCGAGATGAGATTAAATGT
CGGGCATTCTCACTGACCCTCATAGGTTGCGCCAATATCTGGTTTCGGCAGTTCAAAAAACAGTCAATTGCTTTGTTTCGAGAATCGACCCGAGCATTCCTAACC
CAATTTGTAGGAGGTCGGGAACAAAAGAAACTAGCTACCTACCTCTTGACTCTTCGCCAAAAGGCCCATGAAAGCTTTCAGGAGTTTATCGTGCGATTCAACAAT
AAGGCTTTAAAGAATTTGGAGAACTTGTTGAGGAGCAGCAAAATACCAGGATTAGAGGAGAAATGTCGGAGCGTTGTTGTGCCAGAGCATGTCAATGTTGGAGCA
TCGCTTGCTACAGAAATTCCTGGGCAGCAGGATAAGGTCCGCCTAACCATGCTTATAAACTGTTCTTTACGCTTCGATACAAGTCTCATCATGACCCAAAAAGCT
ATAGATGAACTCAACTCGACCCCAGGACTAGGGAATATTTTTGTGGACGACTCCGCTAACAACCATGGGTGTAGGGCAGGACTGGTAATTGTTTCTCCAACTGGG
AGTCGTTTGGAAACAGCTCTAAAGGGAAATTCGACAGATACCACGGTTGAGAACAGAAACGCTGACACGCTAGCACAACTAGCCACTACCTACAGAACGAAAGAA
GCACAGGAAATTCCCGTGAAGTTCATTTCAGAGCCAAGCATAAGAATGTCCGAAAGCCTCCTCATGATGATCGTCCCTCAATTAAGTACCTGGATGGATCCCTTG
ATGAAATACATGACAACAATATAG
Protein sequenceShow/hide protein sequence
MVHNKDYDDITDPMDHVESLITWMDLQGIRDEIKCRAFSLTLIGCANIWFRQFKKQSIALFRESTRAFLTQFVGGREQKKLATYLLTLRQKAHESFQEFIVRFNN
KALKNLENLLRSSKIPGLEEKCRSVVVPEHVNVGASLATEIPGQQDKVRLTMLINCSLRFDTSLIMTQKAIDELNSTPGLGNIFVDDSANNHGCRAGLVIVSPTG
SRLETALKGNSTDTTVENRNADTLAQLATTYRTKEAQEIPVKFISEPSIRMSESLLMMIVPQLSTWMDPLMKYMTTI