; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g26430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g26430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:19388383..19390584
RNA-Seq ExpressionMoc10g26430
SyntenyMoc10g26430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601809.1 hypothetical protein SDJN03_07042, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1451.06Show/hide
Query:  KIENKSFRCSFDPNFKGRVGQIKEFHLSRKFIVAFEEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGK
        KIEN++F C F     G   +IKE H+ R F V  EE IV W  + +EDLLLAP   + FRK  C   F W+ +  NKRGSFI++TKVQ+SGGK
Subjt:  KIENKSFRCSFDPNFKGRVGQIKEFHLSRKFIVAFEEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGK

RVW99803.1 hypothetical protein CK203_029188 [Vitis vinifera]6.4e-0832.09Show/hide
Query:  VNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSID----------------GREG--WFSGVYGPSNSHGRTDSDFWRELE
        V+    +   + + L+ EG  I         KETK++  DR+ +  +W  R I+                G EG  W + VYGP+    R   DFW EL+
Subjt:  VNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSID----------------GREG--WFSGVYGPSNSHGRTDSDFWRELE

Query:  DLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRIS
        DL GL    WC+ GDFNV + +S+K   G  R++
Subjt:  DLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRIS

RVX11275.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.9e-0829.74Show/hide
Query:  SSEAAVNFHRGPAGCP-------GPCPMDKWRVEDGFSYPLVNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSID-----
        SSEAAVN   G AG P       GP P  +W+    F   +++ N     S+      +             +ETKK++ DR+++  +WS R+ D     
Subjt:  SSEAAVNFHRGPAGCP-------GPCPMDKWRVEDGFSYPLVNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSID-----

Query:  --GREG-----------------------------------WFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQ
          G  G                                   W S VYGP+NS  R   DFW EL D+AGL    WC+ GDFNV +  S+K  G +
Subjt:  --GREG-----------------------------------WFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQ

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]6.4e-0847.69Show/hide
Query:  GREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRI
        G + W SG+YGP   H R    FW EL  L GLC   WCI GDFNV +++S+K+ GG+   S +I
Subjt:  GREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRI

XP_031737554.1 transcription factor Pur-alpha 1-like [Cucumis sativus]8.3e-3250Show/hide
Query:  SRQLTAKIENKSFRCSFDPNFKGRVGQIKEFHLSRKFIVAFEEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGK
        S++++ KIENKSF C FD N +GRV ++ E HL++ + +  EE +  WL  S+E++L   + QKFFRKT C  GF WI KTTNKRGSF+EI+KV  SG K
Subjt:  SRQLTAKIENKSFRCSFDPNFKGRVGQIKEFHLSRKFIVAFEEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGK

Query:  TNIVVPAGEGCKGWKAFKQLLLDFINGFESQTKDRLMSNQKTTT
         NIVVPAG   KGW++F++LL+DF+N    +   R + ++K  T
Subjt:  TNIVVPAGEGCKGWKAFKQLLLDFINGFESQTKDRLMSNQKTTT

TrEMBL top hitse value%identityAlignment
A0A0A0L427 Uncharacterized protein1.9e-2161.18Show/hide
Query:  EEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGKTNIVVPAGEGCKGWKAFKQLLLDFIN
        EEI+ VWL +S+E++L  P+  KFFR+T C  GF+WI +TTNKRGSF+EI+KV  SG K NIVVPAG   KGW+ F++LLLDF+N
Subjt:  EEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGKTNIVVPAGEGCKGWKAFKQLLLDFIN

A0A438JQQ0 LINE-1 retrotransposable element ORF2 protein2.4e-0829.74Show/hide
Query:  SSEAAVNFHRGPAGCP-------GPCPMDKWRVEDGFSYPLVNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSID-----
        SSEAAVN   G AG P       GP P  +W+    F   +++ N     S+      +             +ETKK++ DR+++  +WS R+ D     
Subjt:  SSEAAVNFHRGPAGCP-------GPCPMDKWRVEDGFSYPLVNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSID-----

Query:  --GREG-----------------------------------WFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQ
          G  G                                   W S VYGP+NS  R   DFW EL D+AGL    WC+ GDFNV +  S+K  G +
Subjt:  --GREG-----------------------------------WFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQ

A0A5E4F859 Reverse transcriptase domain-containing protein (Fragment)3.1e-0847.69Show/hide
Query:  GREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRI
        G + W SG+YGP   H R    FW EL  L GLC   WCI GDFNV +++S+K+ GG+   S +I
Subjt:  GREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRI

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)9.0e-0846.88Show/hide
Query:  GREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRR
        G + W SG+YGP   H R    FW EL  L GLC   WCI GDFNV +++S+K+ GG+   S +
Subjt:  GREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRR

A0A6J1DMQ9 uncharacterized protein LOC1110219835.3e-0837.11Show/hide
Query:  KETKKDKVDRQIIKDIWSSRSIDGREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRIPVCNGLGGK
        +ETK  ++DR IIK +WSS+ +    GW       ++   R     W EL D++G  +  WC+ GDFNV++W S K++GG  RI+R +   N + G+
Subjt:  KETKKDKVDRQIIKDIWSSRSIDGREGWFSGVYGPSNSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRIPVCNGLGGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACGGCAGTTGACTGCCAAGATTGAAAACAAGTCCTTTAGATGTTCTTTTGATCCGAACTTCAAGGGCAGAGTAGGGCAAATTAAGGAGTTCCATCTG
AGTAGAAAGTTCATAGTCGCCTTTGAAGAAATAATCGTGGTATGGTTAACAAACTCCATAGAAGACCTCCTTCTCGCTCCACAGATCCAGAAGTTCTTTCGAAAG
ACACAATGCTTGAATGGGTTCGCCTGGATCCTAAAGACGACGAATAAAAGAGGCAGCTTTATAGAAATAACGAAGGTCCAAAACTCAGGGGGCAAAACCAACATT
GTGGTCCCAGCGGGGGAAGGTTGCAAAGGATGGAAGGCTTTCAAACAGCTTCTGCTGGATTTTATAAACGGTTTTGAGTCACAAACAAAGGATAGGTTGATGAGC
AATCAAAAGACAACTACATCTTACGCATCAGCTCTCACTAGGCCTTTGGAAAATTCTCCCACAACGATCAACACTCTATCACAGGAGAAAGAAGTGCGAGAAATT
AATTGGGACCAGGTTCTTGTCCTGAATGTTTGGATGTGGCCATCAAGGTTAGAGACGTCGACCTATGAAGACGTTAAGTTTTTGGCCGGGAAAGACGCCAAGGTG
CACGGTGGTTTCTCATCGGAGGCCGCAGTAAACTTCCATCGAGGCCCAGCTGGTTGTCCAGGTCCTTGTCCAATGGACAAATGGAGGGTGGAAGATGGTTTTTCT
TACCCATTGGTAAATACGAACGCCCCTGCAACCTCGAGCCAAGCAACTGATTTGACATGTGAAGGGGGAGGAATACATCCTTTTAAGATGGGTCCCACTGACAAG
GAAACTAAGAAAGACAAGGTTGATAGGCAGATTATTAAAGACATATGGAGCTCTAGATCTATAGACGGTAGAGAAGGTTGGTTCTCTGGAGTCTATGGGCCATCA
AATTCCCATGGGAGAACAGATTCAGATTTTTGGAGAGAATTGGAAGATTTAGCAGGGCTTTGTCAGGGAGCTTGGTGTATAAGGGGGGATTTTAATGTGGCTAAA
TGGTTATCTCAGAAAACCACTGGAGGACAGAAACGCATCTCCCGGAGGATACCAGTCTGCAATGGATTGGGTGGAAAGCAGATAGCAAAGGCACGTTCTCAGTCA
AATCAGCCTTCTTGGCCATCACCTCTCCCTCGAAAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACGGCAGTTGACTGCCAAGATTGAAAACAAGTCCTTTAGATGTTCTTTTGATCCGAACTTCAAGGGCAGAGTAGGGCAAATTAAGGAGTTCCATCTG
AGTAGAAAGTTCATAGTCGCCTTTGAAGAAATAATCGTGGTATGGTTAACAAACTCCATAGAAGACCTCCTTCTCGCTCCACAGATCCAGAAGTTCTTTCGAAAG
ACACAATGCTTGAATGGGTTCGCCTGGATCCTAAAGACGACGAATAAAAGAGGCAGCTTTATAGAAATAACGAAGGTCCAAAACTCAGGGGGCAAAACCAACATT
GTGGTCCCAGCGGGGGAAGGTTGCAAAGGATGGAAGGCTTTCAAACAGCTTCTGCTGGATTTTATAAACGGTTTTGAGTCACAAACAAAGGATAGGTTGATGAGC
AATCAAAAGACAACTACATCTTACGCATCAGCTCTCACTAGGCCTTTGGAAAATTCTCCCACAACGATCAACACTCTATCACAGGAGAAAGAAGTGCGAGAAATT
AATTGGGACCAGGTTCTTGTCCTGAATGTTTGGATGTGGCCATCAAGGTTAGAGACGTCGACCTATGAAGACGTTAAGTTTTTGGCCGGGAAAGACGCCAAGGTG
CACGGTGGTTTCTCATCGGAGGCCGCAGTAAACTTCCATCGAGGCCCAGCTGGTTGTCCAGGTCCTTGTCCAATGGACAAATGGAGGGTGGAAGATGGTTTTTCT
TACCCATTGGTAAATACGAACGCCCCTGCAACCTCGAGCCAAGCAACTGATTTGACATGTGAAGGGGGAGGAATACATCCTTTTAAGATGGGTCCCACTGACAAG
GAAACTAAGAAAGACAAGGTTGATAGGCAGATTATTAAAGACATATGGAGCTCTAGATCTATAGACGGTAGAGAAGGTTGGTTCTCTGGAGTCTATGGGCCATCA
AATTCCCATGGGAGAACAGATTCAGATTTTTGGAGAGAATTGGAAGATTTAGCAGGGCTTTGTCAGGGAGCTTGGTGTATAAGGGGGGATTTTAATGTGGCTAAA
TGGTTATCTCAGAAAACCACTGGAGGACAGAAACGCATCTCCCGGAGGATACCAGTCTGCAATGGATTGGGTGGAAAGCAGATAGCAAAGGCACGTTCTCAGTCA
AATCAGCCTTCTTGGCCATCACCTCTCCCTCGAAAAAGCTAA
Protein sequenceShow/hide protein sequence
MASRQLTAKIENKSFRCSFDPNFKGRVGQIKEFHLSRKFIVAFEEIIVVWLTNSIEDLLLAPQIQKFFRKTQCLNGFAWILKTTNKRGSFIEITKVQNSGGKTNI
VVPAGEGCKGWKAFKQLLLDFINGFESQTKDRLMSNQKTTTSYASALTRPLENSPTTINTLSQEKEVREINWDQVLVLNVWMWPSRLETSTYEDVKFLAGKDAKV
HGGFSSEAAVNFHRGPAGCPGPCPMDKWRVEDGFSYPLVNTNAPATSSQATDLTCEGGGIHPFKMGPTDKETKKDKVDRQIIKDIWSSRSIDGREGWFSGVYGPS
NSHGRTDSDFWRELEDLAGLCQGAWCIRGDFNVAKWLSQKTTGGQKRISRRIPVCNGLGGKQIAKARSQSNQPSWPSPLPRKS