; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g26460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g26460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationchr10:19402154..19403947
RNA-Seq ExpressionMoc10g26460
SyntenyMoc10g26460
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596815.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia]6.8e-5872.04Show/hide
Query:  MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPK
        M KPK  K+ QKL N       +RSRDEKMSGAATAPPQGRPSARP             P+ R   +   +    L  V   VG HH+DEDFAIRGKEPK
Subjt:  MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPK

Query:  DEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        DEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  DEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

KAG7028342.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-5872.83Show/hide
Query:  MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSARP-----SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDE
        M KPK  K+ QKL N       +RSRDEKMSGAATAPPQGRPSARP       +   P  R R     R           VG HH+DEDFAIRGKEPKDE
Subjt:  MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSARP-----SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDE

Query:  VQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  VQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_004147963.1 histone deacetylase complex subunit SAP18 [Cucumis sativus]4.0e-5876.83Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEK SGAATAP QGRPS RP            +P+ R   +   +    L  V   VGGHH+DEDFA+RGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022152730.1 histone deacetylase complex subunit SAP18-like [Momordica charantia]8.6e-6180.49Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARPSLRRLSPKL-------RRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEKMSGAATAPPQGRPSARP      PK        R   +   +    L  V   VGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARPSLRRLSPKL-------RRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_038905116.1 histone deacetylase complex subunit SAP18-like [Benincasa hispida]1.1e-6073.77Show/hide
Query:  MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSAR----PSLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEV
        M KPK+E+S  ++CN   +   +RSRDEKMSGAATAP QGRPS R    P      P+ R   +   +    L  V   VGGHH+D+DFAIRGKEPKDEV
Subjt:  MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSAR----PSLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEV

Query:  QIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        QIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  QIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

TrEMBL top hitse value%identityAlignment
A0A0A0L751 Uncharacterized protein1.9e-5876.83Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEK SGAATAP QGRPS RP            +P+ R   +   +    L  V   VGGHH+DEDFA+RGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A1S3BLT9 histone deacetylase complex subunit SAP18-like5.6e-5876.83Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEK SGAA AP QGRPS RP            +P+ R   +   +    L  V   VGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A5D3D7E1 Histone deacetylase complex subunit SAP18-like5.6e-5876.83Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEK SGAA AP QGRPS RP            +P+ R   +   +    L  V   VGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1DES5 histone deacetylase complex subunit SAP18-like4.1e-6180.49Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARPSLRRLSPKL-------RRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEKMSGAATAPPQGRPSARP      PK        R   +   +    L  V   VGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARPSLRRLSPKL-------RRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1KTJ0 histone deacetylase complex subunit SAP18-like1.6e-5776.22Show/hide
Query:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
        +RSRDEKMSGAATAPPQGRPSARP             P+ R   +   +    L  V   VG HH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE
Subjt:  QRSRDEKMSGAATAPPQGRPSARP-------SLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKE

Query:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        VAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  VAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP185.8e-2052.43Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD
        G HH  ++F+ RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD

Query:  VAI
        +AI
Subjt:  VAI

O55128 Histone deacetylase complex subunit SAP187.6e-2052.43Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD
        G HH  ++F+ RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD

Query:  VAI
        +AI
Subjt:  VAI

O64644 Histone deacetylase complex subunit SAP181.2e-3670.59Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV
        GGHH+ ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDV
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV

Query:  AI
        AI
Subjt:  AI

Q3T022 Histone deacetylase complex subunit SAP185.8e-2052.43Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD
        G HH  ++F+ RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD

Query:  VAI
        +AI
Subjt:  VAI

Q5RDT5 Histone deacetylase complex subunit SAP185.8e-2052.43Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD
        G HH  ++F+ RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLD

Query:  VAI
        +AI
Subjt:  VAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P188.3e-3870.59Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV
        GGHH+ ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDV
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV

Query:  AI
        AI
Subjt:  AI

AT2G45640.2 SIN3 associated polypeptide P186.0e-3670.59Show/hide
Query:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV
        GGHH+ ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G +    VG T +Y N ++ DDSK L EL F+IGDYLDV
Subjt:  GGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV

Query:  AI
        AI
Subjt:  AI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAACCAAAATTGGAAAAATCAAAACAGAAGCTCTGTAACGCCGTACACTCCCACCATGGACAGAGAAGCAGAGATGAGAAGATGAGCGGAGCTGCAACT
GCTCCGCCGCAAGGTAGACCTTCCGCCCGGCCCTCCCTCCGCCGTCTCAGCCCAAAGCTCCGCCGCCGCCTCCTCGCCTCGTTTCGAAACCTGTTTAACCTTGAT
TCCGTTTCTATTGTTGTTGGAGGTCACCACTCTGATGAGGATTTTGCAATTAGAGGCAAGGAACCCAAAGATGAGGTTCAGATTTACACATGGAAAGATGCAACA
CTCCGGGAACTGACCGATCTAGTTAAGGAGGTTGCTCCGGAGGCAAGAAGAAGAAATGCAAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGGTTC
GTCTTGAAACAGGTTGGAATGACACATTCTTATGGAAATGGGAGGAGATTAGATGATAGCAAGGCATTGGGTGAACTGGACTTCCAGATTGGAGATTATTTGGAC
GTGGCAATTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAACCAAAATTGGAAAAATCAAAACAGAAGCTCTGTAACGCCGTACACTCCCACCATGGACAGAGAAGCAGAGATGAGAAGATGAGCGGAGCTGCAACT
GCTCCGCCGCAAGGTAGACCTTCCGCCCGGCCCTCCCTCCGCCGTCTCAGCCCAAAGCTCCGCCGCCGCCTCCTCGCCTCGTTTCGAAACCTGTTTAACCTTGAT
TCCGTTTCTATTGTTGTTGGAGGTCACCACTCTGATGAGGATTTTGCAATTAGAGGCAAGGAACCCAAAGATGAGGTTCAGATTTACACATGGAAAGATGCAACA
CTCCGGGAACTGACCGATCTAGTTAAGGAGGTTGCTCCGGAGGCAAGAAGAAGAAATGCAAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGGTTC
GTCTTGAAACAGGTTGGAATGACACATTCTTATGGAAATGGGAGGAGATTAGATGATAGCAAGGCATTGGGTGAACTGGACTTCCAGATTGGAGATTATTTGGAC
GTGGCAATTCTGTAG
Protein sequenceShow/hide protein sequence
MVKPKLEKSKQKLCNAVHSHHGQRSRDEKMSGAATAPPQGRPSARPSLRRLSPKLRRRLLASFRNLFNLDSVSIVVGGHHSDEDFAIRGKEPKDEVQIYTWKDAT
LRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL