CuGenDBv2

Gene ID	Moc10g26810
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome location	chr10:19711183..19713993
RNA-Seq Expression	Moc10g26810
Synteny	Moc10g26810
Gene Ontology terms	GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domains	IPR007523 - NDUFAF3/Mth938 domain-containing protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022152792.1 LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Momordica charantia]

1.1e-25

58.74

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Query:  MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL--------RRSASLSTVKPSLLVFDFSDACNRFLRLIRSRRLL------CVG
        MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL        R + +  TV    + ++ S  C   L +  S R         + 
Subjt:  MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL--------RRSASLSTVKPSLLVFDFSDACNRFLRLIRSRRLL------CVG

Query:  ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
        I  I+R +         +YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

XP_022155780.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 [Momordica charantia]

4.5e-22

53.95

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL------------RRSASLSTV-----KPSLLVF----------DFSDACNRFLRLI
        ARQK VATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL            R + +  TV     + SLL             FS+       L 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL------------RRSASLSTV-----KPSLLVF----------DFSDACNRFLRLI

Query:  RSRRLLCVGILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
         + RL  V +L ++  +L        +YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  RSRRLLCVGILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

XP_023000217.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita maxima]

2.6e-22

52.74

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------
        ARQK VATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINL     +  V    L F  +++       L     LLCVG                 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I  I+R +          Y EPVNPELRQFIRSTGMKLEAVD+
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

XP_023513625.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo]

2.6e-22

52.74

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------
        ARQK VATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINL     +  V    L F  +++       L     LLCVG                 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I  I+R +          Y EPVNPELRQFIRSTGMKLEAVD+
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

XP_038906819.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida]

1.5e-22

53.42

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------
        ARQK VATLPNLIRSLR DRRRPGLSQPLPSLRRAFSLYDQINL     +  V    L F  +++       +     LLCVG                 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I  I+R +          YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

6.9e-21

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------
        ARQK VATLP+LIR+L+ DRR+PG SQPLPSLRRAFSLYDQINL     +  V    L F  +++       +     LLCVG                 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I  I+R +          YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

A0A6J1DH82 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

5.5e-26

58.74

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Query:  MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL--------RRSASLSTVKPSLLVFDFSDACNRFLRLIRSRRLL------CVG
        MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL        R + +  TV    + ++ S  C   L +  S R         + 
Subjt:  MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL--------RRSASLSTVKPSLLVFDFSDACNRFLRLIRSRRLL------CVG

Query:  ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
        I  I+R +         +YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

A0A6J1DND7 LOW QUALITY PROTEIN: uncharacterized protein LOC111022818

2.2e-22

53.95

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL------------RRSASLSTV-----KPSLLVF----------DFSDACNRFLRLI
        ARQK VATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL            R + +  TV     + SLL             FS+       L 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL------------RRSASLSTV-----KPSLLVF----------DFSDACNRFLRLI

Query:  RSRRLLCVGILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
         + RL  V +L ++  +L        +YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  RSRRLLCVGILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

A0A6J1HIQ3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

2.8e-22

52.05

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------
        ARQK VATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINL     +  V    L F  +++       L     LLCVG                 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I  I+R +          Y EPVNP+LRQFIRSTGMKLEAVD+
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

A0A6J1KD25 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

1.3e-22

52.74

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Query:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------
        ARQK VATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINL     +  V    L F  +++       L     LLCVG                 
Subjt:  ARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFD-FSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I  I+R +          Y EPVNPELRQFIRSTGMKLEAVD+
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G44525.1 Protein of unknown function (DUF498/DUF598)

5.8e-12

39.04

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Query:  RQKEVATLPNLIRSLRKDRRRPGLSQP-LPSLRRAFSLYDQINLRRSASLSTVKPSLLVF-DFSDACNRFLRLIRSRRLLCVG-----------------
        R K +ATLP LI+S+RK+   P  S P LPSLRRAFSLYDQINL     +  V    L F +F+D       +     LLCVG                 
Subjt:  RQKEVATLPNLIRSLRKDRRRPGLSQP-LPSLRRAFSLYDQINLRRSASLSTVKPSLLVF-DFSDACNRFLRLIRSRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I   +R +             PV PE+RQF++S GMKLE VD+
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

AT3G60150.1 Protein of unknown function (DUF498/DUF598)

6.9e-13

37.67

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Query:  RQKEVATLPNLIRSLRKD-RRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFDFSDACNRFLRLIR-SRRLLCVG-----------------
        RQK +ATLP LI+S+R +  ++P L   LPSLRRAFSLYDQINL     +  V    L F   D  +  +  ++    LLCVG                 
Subjt:  RQKEVATLPNLIRSLRKD-RRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFDFSDACNRFLRLIR-SRRLLCVG-----------------

Query:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT
           I   +R +          Y  P+NP++RQF++S GMKLE VD+
Subjt:  ---ILGILRRVLRNSTTWLWEYTEPVNPELRQFIRSTGMKLEAVDT

Sequences

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CDS sequence

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ATGGCGGCGACGGCGAGACAAAAAGAGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCCGGAGGCCAGGACTCAGCCAGCCTCTGCCGTCG
TTGAGACGCGCGTTTTCACTTTACGATCAGATCAATCTCCGAAGATCAGCTTCGCTTTCAACGGTAAAACCCTCGCTTCTCGTTTTCGACTTCTCCGATGCTTGC
AATCGATTTCTTCGCTTGATTCGATCTCGCCGTCTCCTTTGTGTGGGTATTTTAGGTATACTGAGACGGGTTTTACGAAATTCTACTACTTGGCTGTGGGAATAT
ACTGAACCAGTAAATCCTGAATTAAGGCAATTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACTTATAGCTTGA

mRNA sequence

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Protein sequence

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MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLRRSASLSTVKPSLLVFDFSDACNRFLRLIRSRRLLCVGILGILRRVLRNSTTWLWEY
TEPVNPELRQFIRSTGMKLEAVDTVLIA

Moc10g26810 (gene) of Bitter gourd (OHB3-1) v2 genome