CuGenDBv2

Gene ID	Moc10g28060
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	chr10:20935435..20937205
RNA-Seq Expression	Moc10g28060
Synteny	Moc10g28060
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

1.7e-112

85.21

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV
        MALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGI   SA VAVET V+ KDPEP E ESL AG NGSVAAAEE VEV
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV

Query:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
        VSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
Subjt:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG

Query:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

9.6e-111

83.85

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGI---SAAVAVETAVQPKDPE-----PEEQESLAAGANGSVAAAEE
        MALFSP SH ST SPS  H THFSF  F SLRTRNP+ +     TIRA ADNGAGI   SA V+VET V+ KDPE     PEEQESL AG NGSVAAAEE
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGI---SAAVAVETAVQPKDPE-----PEEQESLAAGANGSVAAAEE

Query:  -VEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
         VEVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
Subjt:  -VEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS
        TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

1.7e-112

85.21

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV
        MALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGI   SA VAVET V+ KDPEP E ESL AG NGSVAAAEE VEV
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV

Query:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
        VSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
Subjt:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG

Query:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

XP_022155552.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica charantia]

1.0e-136

100

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWV
        MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWV
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWV

Query:  NGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC
        NGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC
Subjt:  NGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC

Query:  KTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
        KTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
Subjt:  KTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

2.9e-115

85.99

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT---TIRAAADNGAGI---SAAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAAEEVE
        MALFSP SH STLSPSS HRTHFSF  F SLRTRNP+ +   TIRA ADNGAGI   SAAVAVET V+ KDPEP     EEQESL AG NGSVAAAEEVE
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT---TIRAAADNGAGI---SAAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAAEEVE

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
        VVSKFEDPKW+NGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS
        GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDE S
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

4.6e-111

83.85

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGI---SAAVAVETAVQPKDPE-----PEEQESLAAGANGSVAAAEE
        MALFSP SH ST SPS  H THFSF  F SLRTRNP+ +     TIRA ADNGAGI   SA V+VET V+ KDPE     PEEQESL AG NGSVAAAEE
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGI---SAAVAVETAVQPKDPE-----PEEQESLAAGANGSVAAAEE

Query:  -VEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
         VEVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
Subjt:  -VEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS
        TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS

A0A1S3BLD8 uncharacterized protein LOC103490842

8.5e-113

85.21

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV
        MALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGI   SA VAVET V+ KDPEP E ESL AG NGSVAAAEE VEV
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV

Query:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
        VSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
Subjt:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG

Query:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

A0A5A7TG76 Uncharacterized protein

8.5e-113

85.21

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV
        MALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGI   SA VAVET V+ KDPEP E ESL AG NGSVAAAEE VEV
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGI---SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEE-VEV

Query:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
        VSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG
Subjt:  VSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVG

Query:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  LVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

A0A6J1DPN2 light-harvesting complex-like protein 3 isotype 1, chloroplastic

4.9e-137

100

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWV
        MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWV
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWV

Query:  NGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC
        NGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC
Subjt:  NGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC

Query:  KTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
        KTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
Subjt:  KTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

4.8e-108

83.87

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGIS-AAVAVETAVQPKDPEP--EEQESLAAGANGSVAAAEEVEVVSKFEDP
        MALFSPPS  S+LSPSS HRTHF    F SLR+RNP+      AADNGAGIS  +VAVE AV  KDPEP  E++ESLA   NGSVAA EEV VVSKFEDP
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGIS-AAVAVETAVQPKDPEP--EEQESLAAGANGSVAAAEEVEVVSKFEDP

Query:  KWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGN
        KWVNGTWDL QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPV+F++SI+PWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSLTGVGLVGQMGN
Subjt:  KWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGN

Query:  FFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDET
        FFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDET
Subjt:  FFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDET

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

3.7e-73

58.04

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVS
        MALFSPP   S  +P+   +   S      L T+  +  ++ RA++DNG           A+VAVE    P     E   +   GA G  A     E V 
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVS

Query:  KFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLV
        K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVF++SIIPWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVDSLTGVGLV
Subjt:  KFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLV

Query:  GQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
         QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W++  S+
Subjt:  GQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

8.8e-75

58.82

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E
        MALFSPP   S+L  +      FSF+   S   R    +  RA++D+G+   +AAV+VE          +P    P  ++   A A       EE+   E
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
         V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+F++SIIPWWAWIKRYHLPEAELLNGRAAM+GFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE
        GLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W+++
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

6.3e-76

58.82

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E
        MALFSPP   S+L  +      FSF+   S   R    +  RA++D+G+   +AAV+VE          +P    P  ++   A A       EE+   E
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
         V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+F++SIIPWWAWIKRYHLPEAELLNGRAAM+GFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE
        GLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W+++
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE

AT5G47110.1 Chlorophyll A-B binding family protein

2.6e-74

58.04

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVS
        MALFSPP   S  +P+   +   S      L T+  +  ++ RA++DNG           A+VAVE    P     E   +   GA G  A     E V 
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVS

Query:  KFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLV
        K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVF++SIIPWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVDSLTGVGLV
Subjt:  KFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLV

Query:  GQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
         QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W++  S+
Subjt:  GQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCTTGTTTTCTCCTCCATCCCATTTCTCTACGCTCTCTCCCTCTTCGACCCACAGAACCCACTTCTCCTTCACGGCCTTCCCATCTCTCCGAACCAGAAACCCCAC
TTTCACCACCATCAGGGCCGCTGCTGACAATGGCGCCGGAATTTCAGCTGCCGTTGCTGTAGAAACCGCCGTCCAACCGAAGGATCCAGAGCCGGAAGAGCAGGAGAGCC
TCGCTGCCGGTGCTAATGGGTCCGTGGCGGCTGCCGAAGAAGTGGAGGTGGTGAGCAAATTTGAAGACCCCAAGTGGGTTAATGGGACTTGGGATTTGACTCAGTTTCGG
AAAGATGGAAGTACCGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGAAAATGGCTGGAAAACAATCCAGAATCATCAAGCAATGAAGACCCCGTAGTATTTGA
ATCATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTACTCAATGGCCGTGCGGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTG
ATAGCTTGACTGGGGTGGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATATA
GAGACTATAAAGAGGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGCCAAAAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWVNGTWDLTQFR
KDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDI
ETIKRLIDETTFYDKQWQATWQDETSAKK

Moc10g28060 (gene) of Bitter gourd (OHB3-1) v2 genome