; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc10g30360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc10g30360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-H2 finger protein ATL8
Genome locationchr10:22926323..22926877
RNA-Seq ExpressionMoc10g30360
SyntenyMoc10g30360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596287.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]1.0e-7275.26Show/hide
Query:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA
        MTRY   LA NTS A     APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR +  G A N ASAN+GLKKKILQSLPKF Y +S    + 
Subjt:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA

Query:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP
        KF  ECAICLAEF +G++IR LPQCGHCFH+ CVDTWL SHSSCPSCRQILVVARCQKCGEFPAVV G  ++ EEEQ+RREDNN N  GLGFLP
Subjt:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP

XP_022933605.1 RING-H2 finger protein ATL8 [Cucurbita moschata]7.7e-7375.26Show/hide
Query:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA
        MTRY   LA NTS A     APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR +  G A N ASAN+GLKKKILQSLPKF Y +S    + 
Subjt:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA

Query:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP
        KF  ECAICLAEF +G++IR LPQCGHCFH+ CVDTWL SHSSCPSCRQILVVARCQKCGEFPAVV G  +++EEEQ+RREDNN N  GLGFLP
Subjt:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP

XP_022971423.1 RING-H2 finger protein ATL8 [Cucurbita maxima]3.4e-7375.26Show/hide
Query:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA
        MTRY+  LA NTS A     APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR +  G A N ASAN+GLKKKILQSLPKF Y +S    + 
Subjt:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA

Query:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP
        KF  ECAICLAEF +G++IR LPQCGHCFH+ CVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV G  ++NEEEQ+RREDNN N  GLGFLP
Subjt:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]4.1e-7476.29Show/hide
Query:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRA--AGPAPNHASANKGLKKKILQSLPKFTYTSS---AQA
        MTRY   LA NTS A     APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR   +G A N ASAN+GLKKKILQSLPKFTY +S    + 
Subjt:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRA--AGPAPNHASANKGLKKKILQSLPKFTYTSS---AQA

Query:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP
        KF  ECAICLAEF +G++IR LPQCGHCFH+ CVDTWL SHSSCPSCRQILVVARCQKCGEFPAVV G  ++NEEEQ+RREDNN N  GLGFLP
Subjt:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP

XP_038904164.1 RING-H2 finger protein ATL80-like [Benincasa hispida]1.1e-6877.42Show/hide
Query:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC
        MTRYI  LA NTS  APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR  G A N ASAN+GLKKKILQSLPKF Y S+  + K   ECAIC
Subjt:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC

Query:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV-GGAHNDNEEEQQRREDNNANTAGLGFLP
        LAEF EG++IR LPQCGHCFH+ CVDTWLGSHSSCPSCRQILVVARCQKCG+FPAVV GGA ++NEE     EDNN    GLGFLP
Subjt:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV-GGAHNDNEEEQQRREDNNANTAGLGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein6.1e-6874.87Show/hide
Query:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC
        M+ YI  L ANTS +APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR      N ASAN+GLKKKILQSLPKF Y S+    K   ECAIC
Subjt:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC

Query:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV--GGAHNDNEEEQQRREDNNANTAGLGFLP
        LAEF EG++IR LPQCGHCFH+ CVDTWLG+HSSCPSCRQILVVARCQKCG+FPA V  GGAHN+ EEE +   +NN N  GLGFLP
Subjt:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV--GGAHNDNEEEQQRREDNNANTAGLGFLP

A0A1S3BKT0 RING-H2 finger protein ATL801.8e-6775.81Show/hide
Query:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC
        M+ YI  L ANTS +APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR      N ASAN+GLKKKILQSLPKF Y S+    K   ECAIC
Subjt:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC

Query:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV-GGAHNDNEEEQQRREDNNANTAGLGFLP
        LAEF EG++IR LPQCGHCFH+ CVDTWLG+HSSCPSCRQILVVARCQKCG+FPAVV GGA ++NEEE+   EDNN +  GLGFLP
Subjt:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV-GGAHNDNEEEQQRREDNNANTAGLGFLP

A0A5D3CJ22 RING-H2 finger protein ATL801.8e-6775.81Show/hide
Query:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC
        M+ YI  L ANTS +APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR      N ASAN+GLKKKILQSLPKF Y S+    K   ECAIC
Subjt:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSS-AQAKFPPECAIC

Query:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV-GGAHNDNEEEQQRREDNNANTAGLGFLP
        LAEF EG++IR LPQCGHCFH+ CVDTWLG+HSSCPSCRQILVVARCQKCG+FPAVV GGA ++NEEE+   EDNN +  GLGFLP
Subjt:  LAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVV-GGAHNDNEEEQQRREDNNANTAGLGFLP

A0A6J1F5B4 RING-H2 finger protein ATL83.7e-7375.26Show/hide
Query:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA
        MTRY   LA NTS A     APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR +  G A N ASAN+GLKKKILQSLPKF Y +S    + 
Subjt:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA

Query:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP
        KF  ECAICLAEF +G++IR LPQCGHCFH+ CVDTWL SHSSCPSCRQILVVARCQKCGEFPAVV G  +++EEEQ+RREDNN N  GLGFLP
Subjt:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP

A0A6J1I6T7 RING-H2 finger protein ATL81.7e-7375.26Show/hide
Query:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA
        MTRY+  LA NTS A     APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR +  G A N ASAN+GLKKKILQSLPKF Y +S    + 
Subjt:  MTRYITRLAANTSQA-----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA--GPAPNHASANKGLKKKILQSLPKFTYTSS---AQA

Query:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP
        KF  ECAICLAEF +G++IR LPQCGHCFH+ CVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV G  ++NEEEQ+RREDNN N  GLGFLP
Subjt:  KFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL442.3e-4057.23Show/hide
Query:  ITRLAANTSQAAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--AAGPAPNHASANKGLKKKILQSLPKFTYT-------SSAQAK
        +TR +     AAPPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR  A G +P   S NKGLKKK LQSLP+ T+T       ++A+  
Subjt:  ITRLAANTSQAAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--AAGPAPNHASANKGLKKKILQSLPKFTYT-------SSAQAK

Query:  FPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG
           ECAICL +FA+G++IRVLP CGH FH+ C+D WL S SSCPSCR+IL   RC +CG
Subjt:  FPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG

Q8LC69 RING-H2 finger protein ATL81.3e-4654.75Show/hide
Query:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAG-------PAPNHASANKGLKKKILQSLPKFTYT-SSAQAKF
        M R + RL    +  +P   +    SD V+ILA LLCAL C++GLIAV+RCAWLRR A          P  A+ANKGLKKK+L+SLPK TY+  S  A+ 
Subjt:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAG-------PAPNHASANKGLKKKILQSLPKFTYT-SSAQAKF

Query:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRRE
          ECAICL EFA GD++RVLPQCGH FH+ C+DTWLGSHSSCPSCRQILVV RC KCG  P         +   +QR +
Subjt:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRRE

Q9FLC6 RING-H2 finger protein ATL731.4e-2447.2Show/hide
Query:  ALESDFVVILAALLCALICMVGLIAVARCA--WLRRAA---GPAPNHASANKGLKKKILQSLPKFTYTSSAQAKFPPECAICLAEFAEGDQIRVLPQCGH
        ++++  V+ILAALLCALIC +G+ +V RC     RR      P   +A+  KG+KK+ L+ +P  +Y+   + K   EC ICL +F EG+ +RVLP+C H
Subjt:  ALESDFVVILAALLCALICMVGLIAVARCA--WLRRAA---GPAPNHASANKGLKKKILQSLPKFTYTSSAQAKFPPECAICLAEFAEGDQIRVLPQCGH

Query:  CFHLGCVDTWLGSHSSCPSCRQILV
         FH+ C+DTWL SHSSCP+CRQ L+
Subjt:  CFHLGCVDTWLGSHSSCPSCRQILV

Q9LM69 RING-H2 finger protein ATL806.8e-4856.19Show/hide
Query:  MTRYITRL--AANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA------------GPAPNHASANKGLKKKILQSLPKFTYT-
        M R + RL   +NT   A      AL SD VVILAALLCALIC++GLIAV+RC WLRR A             P P  A+ANKGLKKK+LQSLPK T++ 
Subjt:  MTRYITRL--AANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA------------GPAPNHASANKGLKKKILQSLPKFTYT-

Query:  SSAQAKFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFP-AVVGGAHNDNEEE---QQRREDNNA
         S +++   ECAICLAEF+ GD++RVLPQCGH FH+ C+DTWLGSHSSCPSCRQILVVARC KCG  P +   G  ++ E E   +Q  +D N+
Subjt:  SSAQAKFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFP-AVVGGAHNDNEEE---QQRREDNNA

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL451.5e-3953.16Show/hide
Query:  TSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAP----NHASANKGLKKKILQSLPKFTYTSSA---------------QAKF
        T+   PP E +A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G  P         NKGLKKK LQ+LPK TYT+SA                   
Subjt:  TSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAP----NHASANKGLKKKILQSLPKFTYTSSA---------------QAKF

Query:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG
          ECAIC+ EF+EG++IR+LP C H FH+ C+D WL S SSCPSCR+ILV  +C +CG
Subjt:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein4.8e-4956.19Show/hide
Query:  MTRYITRL--AANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA------------GPAPNHASANKGLKKKILQSLPKFTYT-
        M R + RL   +NT   A      AL SD VVILAALLCALIC++GLIAV+RC WLRR A             P P  A+ANKGLKKK+LQSLPK T++ 
Subjt:  MTRYITRL--AANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAA------------GPAPNHASANKGLKKKILQSLPKFTYT-

Query:  SSAQAKFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFP-AVVGGAHNDNEEE---QQRREDNNA
         S +++   ECAICLAEF+ GD++RVLPQCGH FH+ C+DTWLGSHSSCPSCRQILVVARC KCG  P +   G  ++ E E   +Q  +D N+
Subjt:  SSAQAKFPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFP-AVVGGAHNDNEEE---QQRREDNNA

AT1G76410.1 RING/U-box superfamily protein9.1e-4854.75Show/hide
Query:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAG-------PAPNHASANKGLKKKILQSLPKFTYT-SSAQAKF
        M R + RL    +  +P   +    SD V+ILA LLCAL C++GLIAV+RCAWLRR A          P  A+ANKGLKKK+L+SLPK TY+  S  A+ 
Subjt:  MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAG-------PAPNHASANKGLKKKILQSLPKFTYT-SSAQAKF

Query:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRRE
          ECAICL EFA GD++RVLPQCGH FH+ C+DTWLGSHSSCPSCRQILVV RC KCG  P         +   +QR +
Subjt:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRRE

AT2G17450.1 RING-H2 finger A3A1.7e-4157.23Show/hide
Query:  ITRLAANTSQAAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--AAGPAPNHASANKGLKKKILQSLPKFTYT-------SSAQAK
        +TR +     AAPPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR  A G +P   S NKGLKKK LQSLP+ T+T       ++A+  
Subjt:  ITRLAANTSQAAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--AAGPAPNHASANKGLKKKILQSLPKFTYT-------SSAQAK

Query:  FPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG
           ECAICL +FA+G++IRVLP CGH FH+ C+D WL S SSCPSCR+IL   RC +CG
Subjt:  FPPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG

AT4G35480.1 RING-H2 finger A3B1.1e-4053.16Show/hide
Query:  TSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAP----NHASANKGLKKKILQSLPKFTYTSSA---------------QAKF
        T+   PP E +A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G  P         NKGLKKK LQ+LPK TYT+SA                   
Subjt:  TSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAP----NHASANKGLKKKILQSLPKFTYTSSA---------------QAKF

Query:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG
          ECAIC+ EF+EG++IR+LP C H FH+ C+D WL S SSCPSCR+ILV  +C +CG
Subjt:  PPECAICLAEFAEGDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCG

AT5G05280.1 RING/U-box superfamily protein9.8e-2647.2Show/hide
Query:  ALESDFVVILAALLCALICMVGLIAVARCA--WLRRAA---GPAPNHASANKGLKKKILQSLPKFTYTSSAQAKFPPECAICLAEFAEGDQIRVLPQCGH
        ++++  V+ILAALLCALIC +G+ +V RC     RR      P   +A+  KG+KK+ L+ +P  +Y+   + K   EC ICL +F EG+ +RVLP+C H
Subjt:  ALESDFVVILAALLCALICMVGLIAVARCA--WLRRAA---GPAPNHASANKGLKKKILQSLPKFTYTSSAQAKFPPECAICLAEFAEGDQIRVLPQCGH

Query:  CFHLGCVDTWLGSHSSCPSCRQILV
         FH+ C+DTWL SHSSCP+CRQ L+
Subjt:  CFHLGCVDTWLGSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTATATCACACGCCTGGCTGCCAATACGTCTCAGGCGGCGCCTCCGCCTGAGGCCGTCGCCTTGGAGTCCGACTTCGTCGTCATTCTCGCCGCGCTC
CTCTGTGCCCTAATTTGTATGGTAGGCCTAATAGCGGTGGCTCGCTGCGCCTGGCTCCGCCGTGCCGCGGGACCCGCGCCCAATCACGCGTCTGCCAATAAGGGC
TTGAAGAAGAAGATCCTGCAATCGCTCCCCAAATTCACCTACACTTCCTCCGCGCAGGCCAAATTTCCGCCGGAATGTGCGATCTGCTTGGCAGAGTTCGCGGAG
GGGGACCAGATCCGGGTGCTGCCGCAGTGCGGCCATTGCTTCCACCTCGGCTGCGTAGACACCTGGCTCGGCTCCCACTCCTCCTGCCCCTCTTGCCGCCAGATT
CTGGTCGTCGCGAGGTGTCAGAAGTGCGGCGAGTTCCCGGCCGTCGTCGGCGGCGCTCACAACGACAACGAGGAGGAGCAGCAGAGGAGGGAAGATAACAATGCT
AATACCGCCGGTTTGGGATTCTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGCTATATCACACGCCTGGCTGCCAATACGTCTCAGGCGGCGCCTCCGCCTGAGGCCGTCGCCTTGGAGTCCGACTTCGTCGTCATTCTCGCCGCGCTC
CTCTGTGCCCTAATTTGTATGGTAGGCCTAATAGCGGTGGCTCGCTGCGCCTGGCTCCGCCGTGCCGCGGGACCCGCGCCCAATCACGCGTCTGCCAATAAGGGC
TTGAAGAAGAAGATCCTGCAATCGCTCCCCAAATTCACCTACACTTCCTCCGCGCAGGCCAAATTTCCGCCGGAATGTGCGATCTGCTTGGCAGAGTTCGCGGAG
GGGGACCAGATCCGGGTGCTGCCGCAGTGCGGCCATTGCTTCCACCTCGGCTGCGTAGACACCTGGCTCGGCTCCCACTCCTCCTGCCCCTCTTGCCGCCAGATT
CTGGTCGTCGCGAGGTGTCAGAAGTGCGGCGAGTTCCCGGCCGTCGTCGGCGGCGCTCACAACGACAACGAGGAGGAGCAGCAGAGGAGGGAAGATAACAATGCT
AATACCGCCGGTTTGGGATTCTTGCCTTGA
Protein sequenceShow/hide protein sequence
MTRYITRLAANTSQAAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAAGPAPNHASANKGLKKKILQSLPKFTYTSSAQAKFPPECAICLAEFAE
GDQIRVLPQCGHCFHLGCVDTWLGSHSSCPSCRQILVVARCQKCGEFPAVVGGAHNDNEEEQQRREDNNANTAGLGFLP