| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6608449.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 3.1e-96 | 87.76 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLCTGIVQVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+P+ISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| XP_022135338.1 protein DCL, chloroplastic isoform X1 [Momordica charantia] | 1.4e-109 | 100 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| XP_022940238.1 protein DCL homolog, chloroplastic-like [Cucurbita moschata] | 2.6e-95 | 87.24 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLC GIVQVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RW+EP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| XP_022982288.1 protein DCL homolog, chloroplastic-like isoform X1 [Cucurbita maxima] | 1.2e-95 | 87.24 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLCTGI+QVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YA+RFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| XP_023536078.1 protein DCL homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] | 1.5e-95 | 86.73 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
MAASLLLRGHPLLR GL HRGLC+G+VQVTRRSCCTATAA TPPDG+LTSAEN SV S+S P KY RW EPDYRKWKDQE+E+L+D+EP+ISLTKEI+H
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLTS DERIVV+RLLAHHPHAEDKIGCGLE IMVDRHPQFRHSRCLFV+RTDGGWIDFSYQKCLRAYIR+KYPSYAE FIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BU88 protein DCL, chloroplastic | 6.9e-94 | 84.69 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
MAAS L RGHPLLRLGL+ RGLCTG+VQVTRRSCC+AT A TP DG+LT+ +N TS++SSS+PPKY RWDEPDYRKWK+QEEE+L DIEPII LTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
S+RY DGERLT DER VV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYPS+AERFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| A0A6J1C4J4 protein DCL, chloroplastic isoform X1 | 6.9e-110 | 100 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| A0A6J1FNQ4 protein DCL homolog, chloroplastic-like | 1.3e-95 | 87.24 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLC GIVQVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RW+EP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| A0A6J1IHJ1 protein DCL homolog, chloroplastic-like | 4.1e-94 | 85.71 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
MAASLLLRGHPLLR GL HRGLC+G+VQVTRRSCCTATAA TPPDG+LTSAEN SV S+S KY RW EPDYRKWKDQE+E+L+D+EP++SLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLTS DERIVV+RLLAHHPHAEDKIGCGLE IMVDRHPQFR+SRCLFV+RTDGGWIDFSYQKCLRAYIR+KYPSYAE FIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| A0A6J1J4G4 protein DCL homolog, chloroplastic-like isoform X1 | 5.7e-96 | 87.24 | Show/hide |
Query: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLCTGI+QVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt: MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Query: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YA+RFIREHFKRGS
Subjt: SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q42463 Protein DCL, chloroplastic | 4.9e-28 | 44.26 | Show/hide |
Query: DYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCL
D W D E+++L D P++ + ILHS +Y G+RL+ +R ++ RLL +HP + KIG G++ I V HP F +SRCLF++R DG +DFSY KC+
Subjt: DYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCL
Query: RAYIRNKYPSYAERFIREHFKR
+ IR YP YA+ FI HF++
Subjt: RAYIRNKYPSYAERFIREHFKR
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| Q5D869 DNA-directed RNA polymerase V subunit 1 | 9.5e-24 | 41.74 | Show/hide |
Query: QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNK
+E+E+L+D+EP++ ++I+H + Y DG+ ++ D+ V+ ++L HP E K+G G++ I VD+H F SRC FV+ TDG DFSY+K L Y+ K
Subjt: QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNK
Query: YPSYAERFIREHFKR
YP AE FI ++F +
Subjt: YPSYAERFIREHFKR
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| Q9C642 Protein DCL homolog, chloroplastic | 1.9e-27 | 40 | Show/hide |
Query: SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRT
SS+ + + + ++ D E+++L P++ + ILHS +Y + +RL+ ER ++ LL +HP E KIGCG++ IMV HP F SRC+F++R
Subjt: SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRT
Query: DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
DG +DFSY KC++ I+ KYP YA+ FI HF++
Subjt: DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
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| Q9LQ02 DNA-directed RNA polymerase IV subunit 1 | 2.4e-06 | 33.64 | Show/hide |
Query: DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
+IE + K ILHS Y E L DE + V +L HP++ +KIG G++ I V + + S C V+R DG + DFSY KC+ + P
Subjt: DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
Query: FIREHFKRGS
+ ++ K G+
Subjt: FIREHFKRGS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G45230.1 Protein of unknown function (DUF3223) | 1.3e-28 | 40 | Show/hide |
Query: SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRT
SS+ + + + ++ D E+++L P++ + ILHS +Y + +RL+ ER ++ LL +HP E KIGCG++ IMV HP F SRC+F++R
Subjt: SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRT
Query: DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
DG +DFSY KC++ I+ KYP YA+ FI HF++
Subjt: DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
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| AT1G45230.2 Protein of unknown function (DUF3223) | 2.9e-28 | 40 | Show/hide |
Query: SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRT
SS+ + + + ++ D E+++L P++ + ILHS +Y + +RL+ ER ++ LL +HP E KIGCG++ IMV HP F SRC+F++R
Subjt: SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRT
Query: DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
DG +DFSY KC++ I+ KYP YA+ FI HF++
Subjt: DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
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| AT1G63020.1 nuclear RNA polymerase D1A | 1.7e-07 | 33.64 | Show/hide |
Query: DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
+IE + K ILHS Y E L DE + V +L HP++ +KIG G++ I V + + S C V+R DG + DFSY KC+ + P
Subjt: DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
Query: FIREHFKRGS
+ ++ K G+
Subjt: FIREHFKRGS
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| AT2G40030.1 nuclear RNA polymerase D1B | 6.8e-25 | 41.74 | Show/hide |
Query: QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNK
+E+E+L+D+EP++ ++I+H + Y DG+ ++ D+ V+ ++L HP E K+G G++ I VD+H F SRC FV+ TDG DFSY+K L Y+ K
Subjt: QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNK
Query: YPSYAERFIREHFKR
YP AE FI ++F +
Subjt: YPSYAERFIREHFKR
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| AT3G46630.1 Protein of unknown function (DUF3223) | 5.9e-61 | 58.1 | Show/hide |
Query: MAASLLLRGHPLLRLG-LRHRG----LCTGIVQVTRRSCCTATAAP---------TPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLN
M + LLLR PLLR G L HR + GI+ RR C+ P +P +G+ +A N+TS + + R+++PDYRKWK+ E E+L
Subjt: MAASLLLRGHPLLRLG-LRHRG----LCTGIVQVTRRSCCTATAAP---------TPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLN
Query: DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
DIEPI L KEILHS+RY+DGERL DE+IV+ +LL +HP+++DKIGCGL+ IMVDRHPQFRHSRCLFV+RTDGGWIDFSYQKCLRAY+R+KYPS+AER
Subjt: DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
Query: FIREHFKRGS
FIREHFKR S
Subjt: FIREHFKRGS
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