CuGenDBv2

Gene ID	Moc11g04360
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein RKD2-like isoform X1
Genome location	chr11:2798635..2799549
RNA-Seq Expression	Moc11g04360
Synteny	Moc11g04360
Gene Ontology terms	GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR044607 - Transcription factor RKD-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064525.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]

7.8e-84

66.41

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN
        MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP        +AADVDYW ST GPS     Y FPGETSR + Q  +N
Subjt:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN

Query:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD
        F+     +G GG      Y+ +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP     NSS+ TQYKMFD SKKST+
Subjt:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD

Query:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP
        EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW DD +P  S    P P+  YP
Subjt:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP

KAG6608345.1 Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-83

66.67

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDD-ILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPPSEAAAADVDYWGSTA-GPSSYN-FPGETSRRDQGHENFET
        MA+SGD EFPLW  HQN PLFTDD IL+FMA I+PTAAE++A +AA+ ++      PPP S +  A+++YW ST   PSSY+ FPGET            
Subjt:  MANSGDGEFPLWKLHQNYPLFTDD-ILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPPSEAAAADVDYWGSTA-GPSSYN-FPGETSRRDQGHENFET

Query:  QNPDHGG-GGGY-SRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQH
         NP +GG GGGY S + SITPE+ TFQPI+CSCCL+LREIVHTNG+NTRKLEIHGRFGIL HAILQE FP+ N SNI QYKMFDFSKK TDEVK+F+MQH
Subjt:  QNPDHGG-GGGY-SRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQH

Query:  YLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDNCPLPVPLYP
        YLNQMFDEYTA+PEPLSDFYDVLCIGLDW+D SP  S  N   P+PL P
Subjt:  YLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDNCPLPVPLYP

KAG7037698.1 Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-80

65.46

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDD-ILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPPSEAAAADVDYWGSTA-GPSSYN-FPGETSRRDQGHENFET
        MA+SGD EFPLW  HQN PLFTDD IL+FMA I+PTAAE++A +AA+ ++      PPP S +  A+++YW ST   PSSY+ FPGET            
Subjt:  MANSGDGEFPLWKLHQNYPLFTDD-ILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPPSEAAAADVDYWGSTA-GPSSYN-FPGETSRRDQGHENFET

Query:  QNPDHGG-GGGY-SRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQH
         NP +GG GGGY S + SITPE+ TFQPI+CSCCL+LREIVHTNG+NTRKLEIHGRFGIL HAILQE FP+ N SNI QYK+  FSKK TDEVK+F+MQH
Subjt:  QNPDHGG-GGGY-SRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQH

Query:  YLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDNCPLPVPLYP
        YLNQMFDEYTA+PEPLSDFYDVLCIGLDW+D SP  S  N   P+PL P
Subjt:  YLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDNCPLPVPLYP

KGN55365.1 hypothetical protein Csa_012027 [Cucumis sativus]

4.9e-54

64.55

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN
        MA+SGDGEFP W+ H+NYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP        +AADV+YW ST  PS     Y FPGETSR + Q  +N
Subjt:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN

Query:  FETQN-PDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPS---PNSSNITQYKMFD
        F+T     H  GG Y+ +L ITPE +TFQPI+CSCCLVLREIVHTNG+NTRKLEIHGRFGIL HAIL+E FP+    NSS+ TQYKMF+
Subjt:  FETQN-PDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPS---PNSSNITQYKMFD

TYK20065.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]

7.8e-84

66.41

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN
        MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP        +AADVDYW ST GPS     Y FPGETSR + Q  +N
Subjt:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN

Query:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD
        F+     +G GG      Y+ +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP     NSS+ TQYKMFD SKKST+
Subjt:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD

Query:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP
        EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW DD +P  S    P P+  YP
Subjt:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L065 Uncharacterized protein

2.4e-54

64.55

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN
        MA+SGDGEFP W+ H+NYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP        +AADV+YW ST  PS     Y FPGETSR + Q  +N
Subjt:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN

Query:  FETQN-PDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPS---PNSSNITQYKMFD
        F+T     H  GG Y+ +L ITPE +TFQPI+CSCCLVLREIVHTNG+NTRKLEIHGRFGIL HAIL+E FP+    NSS+ TQYKMF+
Subjt:  FETQN-PDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPS---PNSSNITQYKMFD

A0A1S3BCY1 uncharacterized protein LOC103488516 isoform X2

4.5e-29

45.06

Show/hide

Query:  WGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNS
        + S AGPS+     E  ++D  + N  +           S+ L I P   T  P  CSCC VLRE +HTNGVN+RKLEIHGR G++ HAIL E+ P  N 
Subjt:  WGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNS

Query:  SNIT-QYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPT
         NI+ QY+MFDF +KS +E+K+F++Q+ L Q+ ++Y  +P+P+S+FYD LC+G+DW ++  T
Subjt:  SNIT-QYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPT

A0A5A7V999 Protein RKD2-like isoform X1

4.5e-29

45.06

Show/hide

Query:  WGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNS
        + S AGPS+     E  ++D  + N  +           S+ L I P   T  P  CSCC VLRE +HTNGVN+RKLEIHGR G++ HAIL E+ P  N 
Subjt:  WGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNS

Query:  SNIT-QYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPT
         NI+ QY+MFDF +KS +E+K+F++Q+ L Q+ ++Y  +P+P+S+FYD LC+G+DW ++  T
Subjt:  SNIT-QYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPT

A0A5A7VF79 Protein RKD2-like isoform X1

3.8e-84

66.41

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN
        MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP        +AADVDYW ST GPS     Y FPGETSR + Q  +N
Subjt:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN

Query:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD
        F+     +G GG      Y+ +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP     NSS+ TQYKMFD SKKST+
Subjt:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD

Query:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP
        EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW DD +P  S    P P+  YP
Subjt:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP

A0A5D3D916 Protein RKD2-like isoform X1

3.8e-84

66.41

Show/hide

Query:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN
        MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP        +AADVDYW ST GPS     Y FPGETSR + Q  +N
Subjt:  MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHEN

Query:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD
        F+     +G GG      Y+ +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP     NSS+ TQYKMFD SKKST+
Subjt:  FETQNPDHGGGGG-----YSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---SPNSSNITQYKMFDFSKKSTD

Query:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP
        EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW DD +P  S    P P+  YP
Subjt:  EVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-DDHSPTFSTDNCPLPVPLYP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16100.1 unknown protein

2.8e-07

25.93

Show/hide

Query:  PSEAAAADVDYWGSTAGPSSYNFPGETSRRDQGHENFETQNP-DHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVH-TNGVNTRKLEIHGRFGILC
        P++    + D  G     +  N  G+++R +     F   N  D   GG  +  + +T  +      +C+CC +LRE+VH   G    KL+I+G  G +C
Subjt:  PSEAAAADVDYWGSTAGPSSYNFPGETSRRDQGHENFETQNP-DHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVH-TNGVNTRKLEIHGRFGILC

Query:  HAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVL
        HAIL     +P+S    Q  +F     + +EVK+F+  +   ++ +  + L +  + FY  +
Subjt:  HAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAATTCAGGGGACGGCGAGTTCCCACTCTGGAAATTGCATCAAAATTACCCTCTCTTCACCGATGACATTCTCAATTTCATGGCCCAAATCAGGCCCACCGCCGC
CGAAATAATGGCCAAGGCCGCAGCAGACCAAAAAGAACCCGACACTCCTCCCCTTCCGCCGCCACCATCCGAAGCCGCCGCCGCCGACGTGGATTATTGGGGTTCTACGG
CGGGACCCTCGAGTTACAATTTCCCCGGCGAAACCAGTCGCCGGGACCAAGGACACGAAAATTTTGAAACCCAAAATCCCGATCACGGCGGCGGCGGCGGTTACAGTAGG
GAACTTTCGATCACCCCTGAATTGGATACATTTCAACCCATCAGTTGCAGTTGCTGCCTAGTTCTCAGAGAAATTGTTCATACCAATGGTGTGAATACGAGGAAGCTTGA
GATCCATGGAAGATTTGGAATACTGTGCCATGCGATTCTGCAGGAGTATTTTCCCAGCCCGAATTCTTCGAACATCACGCAGTACAAAATGTTTGATTTCTCGAAGAAGA
GTACGGACGAAGTGAAGCGGTTCATGATGCAGCATTATTTGAACCAGATGTTCGATGAGTACACTGCTCTGCCGGAGCCGCTGTCGGATTTTTATGATGTTCTGTGCATT
GGATTGGATTGGGATGATCACAGCCCCACGTTTTCGACCGACAACTGCCCTCTCCCAGTCCCTCTCTACCCAGGTTCCTTCTTCTTCTTCATTTCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSR
ELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCI
GLDWDDHSPTFSTDNCPLPVPLYPGSFFFFIS

Moc11g04360 (gene) of Bitter gourd (OHB3-1) v2 genome