CuGenDBv2

Gene ID	Moc11g04570
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Smr domain-containing protein
Genome location	chr11:2944389..2968575
RNA-Seq Expression	Moc11g04570
Synteny	Moc11g04570
Gene Ontology terms	GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR002625 - Smr domain IPR013899 - Domain of unknown function DUF1771 IPR036063 - Smr domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064547.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

6.4e-160

92.24

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AMDFPAL VS GQNGHPKFD  DLQQS NPYLSSDKD M+FFKSS  PSRGA DFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAVA+MYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRN +G D QGNGRG ERMIDLHGLHVSEAIHVLKHELSVLR TARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

KGN55389.1 hypothetical protein Csa_012546 [Cucumis sativus]

4.2e-159

91.61

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AM+FPAL VS GQNGHPKFD  DLQQS NPYLSSDKD M+FFKSS  PSRGA DFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAVA+MYSEQRE+ARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRN +G D QGNGRG ERMIDLHGLHVSEAIHVLKHELSVLR TARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

XP_008453077.1 PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis melo]

6.4e-160

92.24

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AMDFPAL VS GQNGHPKFD  DLQQS NPYLSSDKD M+FFKSS  PSRGA DFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAVA+MYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRN +G D QGNGRG ERMIDLHGLHVSEAIHVLKHELSVLR TARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

XP_022142699.1 LOW QUALITY PROTEIN: polyadenylate-binding protein-interacting protein 7 [Momordica charantia]

8.7e-173

99.06

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKYNG
        MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFAST+RKLASQDSGMWKYNG
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKYNG

Query:  NGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLH
        NGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSA+AAPVWLETGEAVANMYSEQREEARD ARLRNAYFEQARQAYLIGNKALAKELSVKGQLH
Subjt:  NGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLH

Query:  NMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIE
        NMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIE
Subjt:  NMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIE

Query:  EEGLDFSEPQPGLLRVVIY
        EEGLDFSEPQPGLLRVVIY
Subjt:  EEGLDFSEPQPGLLRVVIY

XP_038896660.1 pentatricopeptide repeat-containing protein At4g33170 [Benincasa hispida]

1.7e-160

92.24

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AMDFPALTVS GQNGHPKFD  DLQQSANP++SSDKD M+FFKSS+ PSRGA DFASTV+KLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ G GKDTY ERLL RGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRNQ+GAD QGNGRG ERMIDLHGLHVSEAIHVLKHELSVL+GTARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2X8 Smr domain-containing protein

2.0e-159

91.61

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AM+FPAL VS GQNGHPKFD  DLQQS NPYLSSDKD M+FFKSS  PSRGA DFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAVA+MYSEQRE+ARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRN +G D QGNGRG ERMIDLHGLHVSEAIHVLKHELSVLR TARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

A0A1S3BW44 pentatricopeptide repeat-containing protein At4g33170-like

3.1e-160

92.24

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AMDFPAL VS GQNGHPKFD  DLQQS NPYLSSDKD M+FFKSS  PSRGA DFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAVA+MYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRN +G D QGNGRG ERMIDLHGLHVSEAIHVLKHELSVLR TARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

A0A5A7VC58 Pentatricopeptide repeat-containing protein

3.1e-160

92.24

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        MLTQLELQVDGGISQNLN KTMSAPNL+AMDFPAL VS GQNGHPKFD  DLQQS NPYLSSDKD M+FFKSS  PSRGA DFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSH L SKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAVA+MYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNMHMKAAHGRAQESIYRQRN +G D QGNGRG ERMIDLHGLHVSEAIHVLKHELSVLR TARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

A0A6J1CM79 LOW QUALITY PROTEIN: polyadenylate-binding protein-interacting protein 7

4.2e-173

99.06

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKYNG
        MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFAST+RKLASQDSGMWKYNG
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKYNG

Query:  NGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLH
        NGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSA+AAPVWLETGEAVANMYSEQREEARD ARLRNAYFEQARQAYLIGNKALAKELSVKGQLH
Subjt:  NGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLH

Query:  NMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIE
        NMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIE
Subjt:  NMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIE

Query:  EEGLDFSEPQPGLLRVVIY
        EEGLDFSEPQPGLLRVVIY
Subjt:  EEGLDFSEPQPGLLRVVIY

A0A6J1FHA7 polyadenylate-binding protein-interacting protein 7 isoform X1

7.7e-159

91.61

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY
        ML QLELQVDG ISQNLN KT+SAPNL+A+DFPALTVS  QNGHPKFD  DLQQS+N YLSSDKD M+FFKSS  PSRGAADFASTVRKLASQDSGMWKY
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFD--DLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKY

Query:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        NGNGSADDSIGSSRSSHTLASKYT+ GHGKDTYSERLL RGSARAAPVWLETGEAV NMY+EQREEARDHARLRNAYFEQARQAYLIGNKALAKELS+KG
Subjt:  NGNGSADDSIGSSRSSHTLASKYTS-GHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNM MKAAHGRAQESIYRQRNQIGAD+ GNGRG ERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        LIEEEGLDFSEPQPGLLRVVIY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

SwissProt top hits

e value

%identity

Alignment

O64843 Polyadenylate-binding protein-interacting protein 7

4.2e-122

71.43

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKF--DDLQQSANPYLSSDKDSMIFFKSS-AVPSRGAADFASTVRKLASQDSGMWK
        MLTQLELQVDGG++QN++PKT + P+LT MDFPAL++S+      +F  DDLQQ+ N Y S +KD+M FFKS  +V   GA D+ S VRKLASQDSGMWK
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKF--DDLQQSANPYLSSDKDSMIFFKSS-AVPSRGAADFASTVRKLASQDSGMWK

Query:  YNGNGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        Y  N SAD SIGSSR+S      Y SG G+  YS++L  R   R APVW+ETG+AV NMYSE REEARD+ARLRN YFEQARQAYL+GNKALAKELSVKG
Subjt:  YNGNGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNM MKAAHG+AQE+IYRQRN +G   QGN RG ERMIDLHGLHVSEA+ VLKHELSVLR TARA+ +RLQ+YICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        L+EEEGLD+SEPQ GLLRV+IY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

Q86UW6 NEDD4-binding protein 2

3.0e-11

32.1

Show/hide

Query:  YSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELS
        Y + R EA  H + R   + +A++AY IG K +A   + +G LH   MK A+  A   I+ + N             + ++DLHGLHV EA+  L   L 
Subjt:  YSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELS

Query:  VLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIEEEGLDFSEPQPGLLRVVI
              + +G +  + +  G G+H++G    AR+  AV +YLI      FSE +PG L+V++
Subjt:  VLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIEEEGLDFSEPQPGLLRVVI

Arabidopsis top hits

e value

%identity

Alignment

AT2G26280.1 CTC-interacting domain 7

3.0e-123

71.43

Show/hide

Query:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKF--DDLQQSANPYLSSDKDSMIFFKSS-AVPSRGAADFASTVRKLASQDSGMWK
        MLTQLELQVDGG++QN++PKT + P+LT MDFPAL++S+      +F  DDLQQ+ N Y S +KD+M FFKS  +V   GA D+ S VRKLASQDSGMWK
Subjt:  MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKF--DDLQQSANPYLSSDKDSMIFFKSS-AVPSRGAADFASTVRKLASQDSGMWK

Query:  YNGNGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG
        Y  N SAD SIGSSR+S      Y SG G+  YS++L  R   R APVW+ETG+AV NMYSE REEARD+ARLRN YFEQARQAYL+GNKALAKELSVKG
Subjt:  YNGNGSADDSIGSSRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKG

Query:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY
        QLHNM MKAAHG+AQE+IYRQRN +G   QGN RG ERMIDLHGLHVSEA+ VLKHELSVLR TARA+ +RLQ+YICVGTGHHTRG+RTPARLPVAVQRY
Subjt:  QLHNMHMKAAHGRAQESIYRQRNQIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRY

Query:  LIEEEGLDFSEPQPGLLRVVIY
        L+EEEGLD+SEPQ GLLRV+IY
Subjt:  LIEEEGLDFSEPQPGLLRVVIY

Sequences

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CDS sequence

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ATGCTTACTCAATTAGAGCTTCAAGTTGATGGTGGGATAAGTCAAAACCTGAATCCCAAGACAATGTCTGCCCCCAATCTTACTGCAATGGACTTTCCCGCACTTACTGT
ATCCAGTGGTCAAAATGGTCATCCAAAATTTGATGATCTCCAACAAAGTGCCAACCCGTATCTCTCTTCTGATAAAGATAGCATGATTTTCTTCAAATCCAGCGCTGTTC
CATCCAGAGGTGCTGCAGACTTTGCTTCTACCGTCAGAAAATTGGCATCTCAGGATTCTGGTATGTGGAAGTACAATGGAAACGGTTCTGCTGATGACTCTATTGGCTCG
AGTAGAAGTTCTCATACATTAGCTAGCAAATACACGAGTGGTCATGGGAAAGACACCTATAGTGAGAGGTTGCTACAGCGAGGTTCAGCCCGGGCTGCTCCAGTTTGGCT
TGAAACTGGTGAAGCAGTTGCAAACATGTATTCTGAGCAGCGGGAGGAAGCACGTGATCATGCTCGCCTGCGAAATGCATATTTTGAACAGGCACGACAAGCATACCTCA
TCGGTAATAAAGCTTTAGCAAAGGAGCTAAGTGTGAAGGGTCAGTTACATAACATGCACATGAAGGCAGCTCATGGAAGGGCCCAAGAATCCATTTATCGCCAAAGGAAC
CAAATAGGCGCAGATGCTCAGGGAAATGGGAGGGGACAGGAACGAATGATCGACTTGCATGGGCTGCATGTGAGCGAAGCGATTCACGTTCTGAAGCACGAGCTGAGCGT
GCTGAGGGGTACTGCCAGGGCCTCGGGACAACGTCTGCAGGTTTATATTTGCGTTGGAACAGGGCATCACACCCGGGGTGCCCGCACTCCTGCCAGACTTCCAGTAGCTG
TACAGAGATACTTGATCGAAGAAGAAGGCCTCGACTTTAGCGAGCCGCAACCAGGGCTGCTTAGAGTTGTGATTTACTGA

mRNA sequence

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Protein sequence

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MLTQLELQVDGGISQNLNPKTMSAPNLTAMDFPALTVSSGQNGHPKFDDLQQSANPYLSSDKDSMIFFKSSAVPSRGAADFASTVRKLASQDSGMWKYNGNGSADDSIGS
SRSSHTLASKYTSGHGKDTYSERLLQRGSARAAPVWLETGEAVANMYSEQREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRN
QIGADAQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRGTARASGQRLQVYICVGTGHHTRGARTPARLPVAVQRYLIEEEGLDFSEPQPGLLRVVIY

Moc11g04570 (gene) of Bitter gourd (OHB3-1) v2 genome