CuGenDBv2

Gene ID	Moc11g04760
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein FAM33A
Genome location	chr11:3104085..3107940
RNA-Seq Expression	Moc11g04760
Synteny	Moc11g04760
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

9.8e-69

88.31

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+ +DVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

XP_022141272.1 spindle and kinetochore-associated protein 2 [Momordica charantia]

2.7e-82

100

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
        MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH

XP_022935897.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]

2.6e-69

88.96

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

XP_023534877.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo]

4.9e-68

88.31

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        M L  LHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNML KMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

1.8e-70

89.61

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        M L HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQK+QAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG+P VSDLDD AFA+FK+ITEEWT QVQSK G+DGQEDAD NDVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VFB8 Protein FAM33A

4.5e-67

86.45

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Query:  MGL-HHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGL-HHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQA

Query:  SMGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        SMGIP VSDLDD A A+FK+ITEEWTTQVQSK G+D QEDAD ++VNKLLFSAVV
Subjt:  SMGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

A0A6J1CJF1 Protein FAM33A

1.3e-82

100

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
        MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH

A0A6J1F6V9 Protein FAM33A

1.3e-69

88.96

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

A0A6J1FBS9 Protein FAM33A

2.6e-67

88.31

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKI  DGQEDA+S+DVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

A0A6J1IP41 Protein FAM33A

5.3e-68

87.66

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Query:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS
        M L  LHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCR++LMAKQDVIDKARTVLVGNRNML+KMQAS
Subjt:  MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Subjt:  MGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV

SwissProt top hits

e value

%identity

Alignment

Q2TBY0 Spindle and kinetochore-associated protein 2

4.7e-05

32.65

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Query:  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNM--LQKMQASMGIPLV
        D L  +F KA+ DL  +QYRLE E +  YPDSA   NP+ L+  +  I+    TL  + + I + +++   K+R     N+ M  +Q++Q    + L+
Subjt:  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNM--LQKMQASMGIPLV

Q4R8E8 Spindle and kinetochore-associated protein 2

2.7e-05

28.18

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Query:  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL--VSD
        D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  ++    TL  + + + + +++   +    +    N++QK+Q    + L  ++ 
Subjt:  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL--VSD

Query:  LDDHAFAQFK
         +  A  QFK
Subjt:  LDDHAFAQFK

Q8WVK7 Spindle and kinetochore-associated protein 2

9.4e-06

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Query:  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL--VSD
        D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  I+    TL  + + + + +++   +    +    NM+QK+Q    + L  ++ 
Subjt:  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL--VSD

Query:  LDDHAFAQFK
         +  A  QFK
Subjt:  LDDHAFAQFK

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

1.2e-43

55.92

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Query:  HQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLV
        + HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+++D++ L+ QC ++L AKQD+IDKA+T LVGN N++QKM AS+G    
Subjt:  HQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLV

Query:  SDLDDHAFAQFKKITEEWTTQVQSK-IGDDGQEDADSNDVNKLLFSAVVHTN
         D DD A A F +I +EWT QV+S+ +G+   EDAD  D+NK+LFSA+ HTN
Subjt:  SDLDDHAFAQFKKITEEWTTQVQSK-IGDDGQEDADSNDVNKLLFSAVVHTN

Sequences

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CDS sequence

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ATGGGGCTTCATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGGCGAACTTGTTCACGAAGGCGAATCATGATCTCTCGGTGGTTCAGTACAGGCTCGAG
AAGGAGTTCCAGCAAATCTATCCCGACAGCGCTAATCCGATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGACGATATATCAACCTTGCAAGAGCAGTGTCGT
GAAATTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCATACCCCTT
GTCAGCGATCTCGATGATCATGCTTTTGCGCAATTCAAGAAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGACGACGGGCAGGAGGACGCC
GACTCTAATGACGTAAATAAGTTGCTATTCTCGGCCGTAGTGCACACCAACCACTAA

mRNA sequence

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Protein sequence

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MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL
VSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH

Moc11g04760 (gene) of Bitter gourd (OHB3-1) v2 genome