CuGenDBv2

Gene ID	Moc11g07040
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Rhamnogalacturonan endolyase
Genome location	chr11:4843967..4849394
RNA-Seq Expression	Moc11g07040
Synteny	Moc11g07040
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0030246 - carbohydrate binding (molecular function) GO:0102210 - rhamnogalacturonan endolyase activity (molecular function)
InterPro domains	IPR008979 - Galactose-binding-like domain superfamily IPR010325 - Rhamnogalacturonate lyase IPR011013 - Galactose mutarotase-like domain superfamily IPR013784 - Carbohydrate-binding-like fold IPR014718 - Glycoside hydrolase-type carbohydrate-binding IPR029411 - Rhamnogalacturonan lyase, domain III IPR029413 - Rhamnogalacturonan lyase, domain II

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136250.1 probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus]

0.0e+00

91.79

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TG+RYNGVDNLLEVLNPE NRGYWDLVWNSPGSKG+FDVIKGS FRV+VENEE+VELSF+RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EV SWPYSFPASEDFPK DQRG VSGRLLVFDRYV QDYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+H G+YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDALIN++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPIHIN LFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DY KDWFFA VPRKTN N+H+GTTWQIKFKLD VDHKSMY LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+Y VG+AG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

XP_008466137.1 PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo]

0.0e+00

91.94

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGS F V+VENEE+VELSF+RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EV+SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDAL+N++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DY KDWFFA VPRKTNSN+H+GTTWQIKF+LD VD KSMYMLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

XP_022940913.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata]

0.0e+00

89.57

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSC+NKDLKVHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EVQSWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDALINI+QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DYSKDWFFAQVPRKTN N+HQGTTW+I FKLD VD K+ YMLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEGDN IF TQPRCTSPFQGIMYDYIRLE P T
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

XP_022980958.1 probable rhamnogalacturonate lyase B [Cucurbita maxima]

0.0e+00

89.73

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGI YNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCENKDLKVHGWI  NPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EVQSWPYSFPAS++FPK+DQRGT+SGRLLVFDRY+S+DYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDALINI+QGS IE+G+LVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DYSKDWFFAQVPRKTN+N+HQGTTW+I FKLD VD KS YMLRVAIASATLAELQVR+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEGDN IF TQPRCTSPFQGIMYDYIRLEGP T
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

XP_038897922.1 probable rhamnogalacturonate lyase B [Benincasa hispida]

0.0e+00

92.73

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS GVRLQIRD HVVV+NGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGSSFRV+VENEE+VELSFMRMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQ+ MPLPDDRLSGRCQTLAYPEAVLLTNPKNP+LKGEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCENKDLKVHGWICTNPPTGFW ITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVF Y NSTSVGDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EV+SWPYSFPASEDFPKVDQRG V GRLLV DRYVSQDYLPASGAFVG+SAPGEVGSWQRECKGYQFWTRADDGGYFTINH H GDYNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        Y+WV GFIGDYRCDALIN+NQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP HIN LFVNHPDRFRQYGLWDRYAELYP+EDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DYSKDWFFAQVPRKT SN+H+GTTWQIKF L+ V  KSMY LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YWLYSVG+ G HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJQ9 Rhamnogalacturonan endolyase

0.0e+00

91.79

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TG+RYNGVDNLLEVLNPE NRGYWDLVWNSPGSKG+FDVIKGS FRV+VENEE+VELSF+RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EV SWPYSFPASEDFPK DQRG VSGRLLVFDRYV QDYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+H G+YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDALIN++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPIHIN LFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DY KDWFFA VPRKTN N+H+GTTWQIKFKLD VDHKSMY LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+Y VG+AG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

A0A1S3CQJ4 Rhamnogalacturonan endolyase

0.0e+00

91.94

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGS F V+VENEE+VELSF+RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EV+SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDAL+N++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DY KDWFFA VPRKTNSN+H+GTTWQIKF+LD VD KSMYMLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

A0A5D3E6J1 Rhamnogalacturonan endolyase

0.0e+00

91.94

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGS F V+VENEE+VELSF+RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EV+SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDAL+N++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DY KDWFFA VPRKTNSN+H+GTTWQIKF+LD VD KSMYMLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

A0A6J1FQM1 Rhamnogalacturonan endolyase

0.0e+00

89.57

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSC+NKDLKVHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EVQSWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDALINI+QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DYSKDWFFAQVPRKTN N+HQGTTW+I FKLD VD K+ YMLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEGDN IF TQPRCTSPFQGIMYDYIRLE P T
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

A0A6J1J0S6 Rhamnogalacturonan endolyase

0.0e+00

89.73

Show/hide

Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGI YNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCENKDLKVHGWI  NPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LWEDAKIQMM EVQSWPYSFPAS++FPK+DQRGT+SGRLLVFDRY+S+DYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV GFIGDYRCDALINI+QGS IE+G+LVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTS
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DYSKDWFFAQVPRKTN+N+HQGTTW+I FKLD VD KS YMLRVAIASATLAELQVR+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        VEGDN IF TQPRCTSPFQGIMYDYIRLEGP T
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

SwissProt top hits

e value

%identity

Alignment

A5ABH4 Probable rhamnogalacturonate lyase B

3.5e-19

26.33

Show/hide

Query:  KYQYSCENKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDD
        KY +S   +D  VHG       +N  T G W +  + +   GGPL   LT  V        +S H+   +  P    G  + + FGP + +FN    G  
Subjt:  KYQYSCENKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDD

Query:  PFWLWEDAKIQMMTEVQ-SWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQR-ECKGYQFWTRADDGGYF
             ++ K    T    SW   F  S       +    QRG+V G++           LP  A+     L+  G+           YQ+W   DD G+F
Subjt:  PFWLWEDAKIQMMTEVQ-SWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQR-ECKGYQFWTRADDGGYF

Query:  TINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF---YAPDP-NPIHINNLFVNHPDRFRQYGLWDRY
        +++H+  G Y L  +  G  GD+  D  + +  G    + +  +E    G  +W +G PD+S+ EF    A DP +P+H        P+    +G +D  
Subjt:  TINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF---YAPDP-NPIHINNLFVNHPDRFRQYGLWDRY

Query:  AELYPDEDLVYTVGTSDYSKD-----W-FFAQVPRKTNSNAHQGTTWQIKFKL--DSVDHKSMYMLRVAIASATLA
        ++ +PD  + YT+GTSD + D     W  F   P            W I F L  D +  +S   L + +A A  A
Subjt:  AELYPDEDLVYTVGTSDYSKD-----W-FFAQVPRKTNSNAHQGTTWQIKFKL--DSVDHKSMYMLRVAIASATLA

Q5AZ85 Rhamnogalacturonate lyase B

1.4e-20

22.32

Show/hide

Query:  DRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNID-
        D  +V++N  L+ T  K  G +  +  +G D L           Y D      G           S   V E  +  + +  +     L   + P   + 
Subjt:  DRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNID-

Query:  KRFIVLR-GSSGFYSYAIYEHLKDWPDF--DLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNP---QLKGEVDDKY
        +++  LR G +GF+ ++   +  +   F  +L E R  F+   D + ++  +D   +  PLP D      Q +       L N  +    Q   E   KY
Subjt:  KRFIVLR-GSSGFYSYAIYEHLKDWPDF--DLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNP---QLKGEVDDKY

Query:  QYSCENKDLKVHGWICTNPPT-----GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPF
         +S   +D  VHG       +     G W +  + +   GGPL   LT  V        +S H+   +  P    G  + + FGP F  FN    G    
Subjt:  QYSCENKDLKVHGWICTNPPT-----GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPF

Query:  WLWEDAKIQMMTEVQSWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQREC-KGYQFWTRADDGGYFTIN
         L E           SW   F  S       +    QRG+V G +           LP  A      L+  G            +Q+W   D  G F+I+
Subjt:  WLWEDAKIQMMTEVQSWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQREC-KGYQFWTRADDGGYFTIN

Query:  HIHAGDYNLYAWVHGFIGDYRCDAL-ININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YAPDPNPIHINNLFVNHPDRFRQY-GLWDRYAELY
         + AG Y L  +  G  GD+  D + +   + + I+     ++P   G  +W +G PD+S+ EF +    +P H       HP  +  Y G +D  ++  
Subjt:  HIHAGDYNLYAWVHGFIGDYRCDAL-ININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YAPDPNPIHINNLFVNHPDRFRQY-GLWDRYAELY

Query:  PDEDLVYTVGTSDYSKDW------FFAQVPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRI---NDPRSKRPLFT--------
           D  Y +G SD + D+       F   P    + ++    W+I+F L +  +  +    L + +A A  A     +   ++P +  PL +        
Subjt:  PDEDLVYTVGTSDYSKDW------FFAQVPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRI---NDPRSKRPLFT--------

Query:  -SGLIGRDNS---IARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQG--------IMYDYIRLE
         + +IG D S   I R  +             S L EG N + L+ P   + ++         + YD +RLE
Subjt:  -SGLIGRDNS---IARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQG--------IMYDYIRLE

Arabidopsis top hits

e value

%identity

Alignment

AT1G09880.1 Rhamnogalacturonate lyase family protein

9.2e-241

60.22

Show/hide

Query:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLE-VLNPEHNRGYWDLVWNSPG-----SKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNID
        ++N  LQLTLS P+G VTGI+YNG+DN+L    N E++RGYWD+VWN PG     +KG  D I+ +   V+ +N+E++ELSF R W  S     VP+NID
Subjt:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLE-VLNPEHNRGYWDLVWNSPG-----SKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNID

Query:  KRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCEN
        KRF++L+ SSGFYSYAI+E L+ WP  +L   R+ FKL K KF YMA++D+RQR+MP+PDDR+  R Q LAYPEAV L +P  P+ KGEVDDKY+YS E+
Subjt:  KRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCEN

Query:  KDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMM
        KD+KVHGWI TN   GFWQITPS+EFRS GPLKQ L SHVGPT LA+F S HY G DL+  F+ GE WKKVFGPVF+Y NS   G DP  LW +AK Q  
Subjt:  KDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMM

Query:  TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGD
         E + WPY+F AS+DFP  DQRG+VSGRLLV DR++S + +PA+G++VGL+APG+VGSWQRECKGYQFW++AD+ G F+IN++ +G YNLYA+  GFIGD
Subjt:  TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGD

Query:  YRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQ
        Y  D + +I+ GS I +GDLVYEPPRDG TLWEIG+PDRSA+EFY PDPNP  +N L++NH D++RQYGLW+RY+ELYPDED+VY V   DYSK+WFF Q
Subjt:  YRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQ

Query:  VPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF
        V RK  +  ++GTTWQI+F+ D    +    + LR+A+A++ +AELQVR+ND  +  PLF +  IGRDN+IARHGIHGLYWLYSV +  + L  G+NTI+
Subjt:  VPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF

Query:  LTQPRCTSPFQGIMYDYIRLEGPPTM
        LTQ   TSPFQG+MYDYIRLE P ++
Subjt:  LTQPRCTSPFQGIMYDYIRLEGPPTM

AT1G09890.1 Rhamnogalacturonate lyase family protein

7.7e-280

70.66

Show/hide

Query:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVL
        +DNGI ++TLSKPDGIVTGI YNG+DNLLEVLN E NRGYWDLVW   G+ G FDVIKGS+F V+V+NEE++ELSF R W+PS EGK VPLNIDKRF++L
Subjt:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVL

Query:  RGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVH
         GSSGFY+YAIYEHLK+WP F L ETRI FKLRK+KF YMAV D+RQRFMPLPDDRL  R Q LAYPEAVLL NP   Q KGEVDDKYQYSCENKD+ VH
Subjt:  RGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVH

Query:  GWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGD-DPFWLWEDAKIQMMTEVQ
        GWICT  P+ GFW ITPS E+R+GGP KQ+LTSHVGPT LA+F+SAHY G+DLVPKF  GE WKKVFGPVF+Y NS++  D DP WLW+DAK QM  E +
Subjt:  GWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGD-DPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPAS+D+ K +QRG V GRLLV DRYV +D++ A+  +VGL+ PG  GSWQRECK YQFWTR D+ G+F I+ I  G YNLYAW+ GFIGDY+ D
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
         +I I  G  I + DLVY+PPR+G TLWEIG PDRSA+EFY PDPNP +INNL+ NHPDRFRQYGLW+RYAELYPD+DLVY VG+SDY KDWF+AQV RK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
         ++  +QGTTWQIKF+L ++D    Y LRVAIASAT +ELQ+R+N+  +  P+FTSGLIGRDNSIARHGIHGLYWL++V +AGS L+EG+NT+FLTQPR 
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGP
        TSPFQGIMYDYIR E P
Subjt:  TSPFQGIMYDYIRLEGP

AT1G09910.1 Rhamnogalacturonate lyase family protein

6.7e-292

70.3

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Query:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL
        MSS GV L + DR+VV+DNGILQ+TLSKP GI+TGI YNG+DN+LEV N E NRGYWDL WN PG KGIFDVI G +FRV+VE EE+VE+SF+R W+PSL
Subjt:  MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSL

Query:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV
        EGK++PLNIDKRFI+LRGSSG YSY IYEHLKDWP F+LGETRI FKLRKDKF YMAVAD+R+R MP PDD   GRCQTL Y EA LLT P +P+L+GEV
Subjt:  EGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEV

Query:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW
        DDKYQYSCENKDL+VHGWI  +PP GFWQITPS+EFRSGGPLKQ+LTSHVGPTTLA+F S HYAG+ ++P+F  GEPWKKV+GPVF+Y NST+ GDDP  
Subjt:  DDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW

Query:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL
        LW+DAKI+MM EV+ WPYSF AS+D+PK ++RGT  GRLL+ DR+++ D + A GA+VGL+ PG+ GSWQ ECKGYQFW  AD+ GYF+I ++  G+YNL
Subjt:  LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNL

Query:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS
        YAWV  FIGDY    ++ +  G  IEMGD+VYEPPRDGPTLWEIGIPDR ASEF+ PDP+P  +N + V+H DRFRQYGLW +Y ++YP++DLVYTVG S
Subjt:  YAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTS

Query:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL
        DY +DWFFA VPRK   + H+GTTWQI F L+++D K+ Y LRVAIASATLAELQ+RIND  + RPLFT+GLIGRDNSIARHGIHG+Y LY+V I G+ L
Subjt:  DYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL

Query:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT
        V+GDNTIFL QPRC  PFQGIMYDYIRLEGPP+
Subjt:  VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT

AT2G22620.1 Rhamnogalacturonate lyase family protein

4.9e-226

58.74

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGI+Q+T S P+G++TGI+Y+G+DN+L+  +   +RGYWD+VW  P  K   D ++G+ F ++ +NEE++E+SF R W  S  G  VPLN+DKR+I
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLK
        +  G SG Y Y I E L+ WPD D+ + RI FKL   KF +MA++D+RQR MP   DR + +  +LAY EAVLLTNP NP  KGEVDDKY YS E+KD  
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI ++PP GFW ITPSDEFR GGP+KQ LTSH GP TL++F S HYAG+++   +R GEPWKKVFGPV  Y NS S  D    LW DAK QM  EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPY F  SED+P   QRGT+ G+ L+ D YVS+  +    AFVGL+  GE GSWQ E KGYQFWT+AD  G F I ++ AG+Y+LYAW  GFIGDY+ +
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNH-PDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPR
          I I  GS + +G LVYEPPR+GPTLWEIG+PDR+A EFY PDP P  +N L+VN   DRFRQYGLWDRYA+LYP  DLVYT+G SDY  DWFFA V R
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNH-PDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPR

Query:  KTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR
           ++ +Q TTWQI F L +V+    Y LR+A+ASA  +ELQ+RINDP+S   +FT+G IG+DN+IARHGIHGLY LYS+ +AG+ L  GDNTIFLTQ R
Subjt:  KTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR

Query:  CTSPFQGIMYDYIRLEGP
          +PFQGIMYDYIRLE P
Subjt:  CTSPFQGIMYDYIRLEGP

AT4G24430.1 Rhamnogalacturonate lyase family protein

4.6e-256

64.04

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Query:  VRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWN---SPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEG
        V+L +++ HVV+ NG +++T+SKPDG VTGI Y GVDNLLE  N + NRGYWDLVW+   +PG+ G  + IKG+SF VVVENEE VE+SF R W+ SL+ 
Subjt:  VRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWN---SPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEG

Query:  KFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDD
           P+N+DKRFI+ +  +GFYSYAI+EHL +WP F+L +TRI +KLRKDKF+YMA+ADNRQR MPLP+DRL  R + LAYPEAVLL +P   + KGEVDD
Subjt:  KFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDD

Query:  KYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNS-TSVGDDPFWL
        KY+YS ENKDLKVHGWI  N   G WQI PS+EFRSGG  KQ+LTSHVGP +LA+FLSAHYAG+D+V K +AG+ WKKVFGPVF Y N       DP  L
Subjt:  KYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNS-TSVGDDPFWL

Query:  WEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLY
        W+DAK QM+TEVQSWPY FPASEDFP  D+RG +SGRLLV D+++S D+LPA+GAFVGL+ PGEVGSWQ E KGYQFWT AD  GYF IN I  G+YNL 
Subjt:  WEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLY

Query:  AWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSD
         +V G+IGDY+ + LINI  G  I++G++VYEPPRDGPT+WEIGIPDRSA+EF+ PDPNP +IN L++ HPDRFRQYGLW+RY ELYP EDLV+T+G SD
Subjt:  AWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSD

Query:  YSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKR--PLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSH
        Y KDWFFA V RK   + +Q TTWQIKFKL++V     Y +R+A+A+A +AELQVR+ND  +++  P+FT+G+IG DN+IARHGIHG+Y LY+V +    
Subjt:  YSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKR--PLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSH

Query:  LVEGDNTIFLTQPRCTS-PFQGIMYDYIRLEGPP
        LVEGDNT+FLTQ   T+  F G+MYDYIRLEGPP
Subjt:  LVEGDNTIFLTQPRCTS-PFQGIMYDYIRLEGPP

Sequences

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CDS sequence

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ATGTCATCCACGGGGGTGCGGTTGCAGATACGAGATCGTCATGTGGTGGTGGATAATGGAATACTGCAACTAACTTTATCAAAACCAGACGGAATTGTCACTGGCATACG
ATATAATGGCGTTGACAATCTGCTTGAAGTTCTTAACCCTGAACATAACAGAGGGTACTGGGACCTTGTTTGGAATTCTCCAGGAAGCAAAGGAATATTTGACGTGATTA
AGGGATCAAGTTTTAGGGTTGTAGTGGAAAATGAGGAACGGGTAGAGCTTTCTTTTATGAGGATGTGGGAGCCCTCCCTCGAGGGCAAGTTTGTTCCTTTGAACATAGAC
AAAAGGTTCATAGTGCTACGTGGTTCCTCTGGATTCTACTCTTATGCAATCTATGAGCACTTGAAGGATTGGCCTGATTTTGATCTTGGTGAAACCAGGATCACTTTTAA
GCTCAGAAAAGACAAGTTTCAGTACATGGCTGTAGCTGATAACAGGCAGAGATTCATGCCGCTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTACCCCG
AAGCCGTCTTACTTACTAATCCCAAGAACCCTCAACTCAAGGGTGAGGTGGATGACAAATACCAATACTCATGTGAAAACAAAGACTTAAAGGTCCATGGATGGATATGC
ACCAATCCACCCACCGGGTTTTGGCAGATTACACCCAGTGATGAGTTTCGGTCAGGCGGACCTCTTAAGCAAAGTCTAACATCACATGTGGGACCTACAACCCTTGCTAT
ATTTCTTAGTGCTCATTATGCGGGACAAGATTTGGTGCCAAAATTTAGAGCCGGTGAGCCATGGAAGAAGGTTTTTGGCCCTGTTTTTCTCTATTTTAATTCCACGTCAG
TTGGAGATGACCCATTTTGGTTATGGGAGGATGCTAAAATACAGATGATGACGGAAGTTCAAAGTTGGCCTTATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTGGAT
CAACGGGGTACTGTTAGTGGTAGACTACTGGTTTTTGACAGGTATGTTAGTCAAGACTATCTGCCTGCCAGTGGAGCCTTTGTAGGATTGTCTGCACCAGGAGAAGTAGG
GTCATGGCAGAGAGAATGCAAGGGATATCAATTCTGGACTAGAGCAGATGATGGTGGTTATTTTACCATCAACCACATACACGCTGGCGACTATAATCTATATGCGTGGG
TCCACGGCTTTATTGGAGATTATCGTTGTGATGCTCTCATTAACATAAACCAAGGATCTTGCATTGAAATGGGCGACCTCGTATATGAACCTCCAAGAGATGGGCCCACA
CTTTGGGAAATAGGCATTCCTGATCGCTCTGCATCTGAGTTCTATGCTCCTGATCCTAACCCGATACATATTAATAACCTCTTTGTAAACCATCCAGACAGGTTCCGGCA
ATATGGATTGTGGGACAGATATGCTGAATTATACCCTGACGAGGATTTAGTATACACAGTTGGCACAAGCGATTATAGTAAAGATTGGTTCTTCGCTCAGGTCCCAAGGA
AGACAAACAGTAACGCGCATCAAGGAACTACTTGGCAAATCAAATTCAAACTCGATAGTGTGGATCACAAGAGTATGTATATGCTACGAGTCGCGATTGCATCTGCAACT
CTTGCTGAATTGCAGGTCCGGATTAATGACCCGAGATCAAAGCGACCTCTGTTTACGAGTGGGTTGATAGGGAGGGACAACTCAATTGCTAGACATGGAATTCATGGACT
TTATTGGCTTTACAGCGTGGGGATAGCAGGCTCTCATCTTGTTGAAGGAGATAACACGATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAAGGTATCATGTATG
ATTACATCCGTCTGGAAGGTCCCCCAACTATGTGA

mRNA sequence

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Protein sequence

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MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNID
KRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWIC
TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQSWPYSFPASEDFPKVD
QRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPT
LWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASAT
LAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPTM

Moc11g07040 (gene) of Bitter gourd (OHB3-1) v2 genome