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Moc11g09320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g09320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L18a-like protein
Genome locationchr11:6609034..6611131
RNA-Seq ExpressionMoc11g09320
SyntenyMoc11g09320
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146004.1 60S ribosomal protein L18a-like protein [Cucumis sativus]1.6e-6377.27Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MS+++K +AA GVVVHHHHESNS HP YGTFQGVANYPPVGF  P R PG  DS DPSQ Q YAH YQAVPGYAIVEGRPVRE RLPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFF+  IPWYAGAI+I+CGRVDYREKPGYVAC+IAA++ T+A+I G T+  DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_008452440.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]2.0e-6681.17Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQE+K +AA GVVVHHHHESNS HP YGTFQGVANYPPV FPQP RPPG SDS DPSQ Q YAH YQAVPGYAIVEGRPVRE  LPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFF+  IPWYAGAI+ILCGRVDYREKPGYVAC+IAA++ TLA+I G T+  DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_022135554.1 60S ribosomal protein L18a-like protein [Momordica charantia]8.1e-84100Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_023536200.1 60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo]2.1e-6076.62Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQE+K +AA GVVVHHHHE N GHP YGTFQGVANYPPVGFPQP RPPG SD  D SQ Q YAH YQ V GYAIVEGRPVRE RLPCCGIG GWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        G FI+   WY GAI+ILCGRV YREKPGYVAC+IAA++ T+A+I G TKG DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_038896754.1 60S ribosomal protein L18a-like protein [Benincasa hispida]4.8e-6882.47Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQE+K +AA GVVVHHHHESNSGHP YGTFQGVANYPPVGFPQP RPPG SDS DPSQ Q YAH YQAVPGY IVEGRPVRERRLPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFF+  IPWYAGAI+ILCGRVDYREKPGYVAC IAA+L T+A+I G T+  D W
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

TrEMBL top hitse value%identityAlignment
A0A0A0L1Y0 Uncharacterized protein7.7e-6477.27Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MS+++K +AA GVVVHHHHESNS HP YGTFQGVANYPPVGF  P R PG  DS DPSQ Q YAH YQAVPGYAIVEGRPVRE RLPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFF+  IPWYAGAI+I+CGRVDYREKPGYVAC+IAA++ T+A+I G T+  DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A1S3BUZ1 60S ribosomal protein L18a-like protein9.7e-6781.17Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQE+K +AA GVVVHHHHESNS HP YGTFQGVANYPPV FPQP RPPG SDS DPSQ Q YAH YQAVPGYAIVEGRPVRE  LPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFF+  IPWYAGAI+ILCGRVDYREKPGYVAC+IAA++ TLA+I G T+  DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A5D3D9U1 60S ribosomal protein L18a-like protein9.7e-6781.17Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQE+K +AA GVVVHHHHESNS HP YGTFQGVANYPPV FPQP RPPG SDS DPSQ Q YAH YQAVPGYAIVEGRPVRE  LPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFF+  IPWYAGAI+ILCGRVDYREKPGYVAC+IAA++ TLA+I G T+  DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A6J1C1R6 60S ribosomal protein L18a-like protein3.9e-84100Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A6J1INF5 60S ribosomal protein L18a-like protein1.4e-6076.62Show/hide
Query:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII
        MSQE+K +AA GVVVHHHHE N GHP YGTFQGVANYPPVGFPQP RPPG SD  D SQ Q YAH YQ V GYAIVEGRPVRE RLPCCGIG GWFLFII
Subjt:  MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFII

Query:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        G FI+   WY GAI+ILCGRV YREKPGYVAC+IAA++ T+A+I G TKG DVW
Subjt:  GFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein2.7e-2942.86Show/hide
Query:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL
        +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P  HAYQ                  VP Y +VE RP+ E  L
Subjt:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL

Query:  PCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PCCG+G+GWFLFI+GF   GIPWY GA ++L   VD+REK GYVAC+IA+++  +A++LG+T  +++W
Subjt:  PCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family9.3e-4661.81Show/hide
Query:  ESNSGHPQYGTFQGVANYPP-------VGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGY-AIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYA
        E  + H QYGTFQGV+NYPP        GFPQP  PPG  DS  P     YAH YQ VP +  + EGRPVR+RRLPCCGIG+GWFLFI+GFF+  IPWY 
Subjt:  ESNSGHPQYGTFQGVANYPP-------VGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGY-AIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYA

Query:  GAIVILCG-RVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        G  +++ G R+DYREKPGY+ACTIAAIL T+A+ILGV+KG D W
Subjt:  GAIVILCG-RVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

AT1G29970.1 60S ribosomal protein L18A-11.9e-3042.86Show/hide
Query:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL
        +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P  HAYQ                  VP Y +VE RP+ E  L
Subjt:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL

Query:  PCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PCCG+G+GWFLFI+GF   GIPWY GA ++L   VD+REK GYVAC+IA+++  +A++LG+T  +++W
Subjt:  PCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

AT1G29970.2 60S ribosomal protein L18A-13.7e-2644.97Show/hide
Query:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL
        +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P  HAYQ                  VP Y +VE RP+ E  L
Subjt:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL

Query:  PCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIA
        PCCG+G+GWFLFI+GF   GIPWY GA ++L   VD+REK GYVAC+IA
Subjt:  PCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIA

AT1G29970.3 60S ribosomal protein L18A-12.6e-2434.29Show/hide
Query:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL
        +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P  HAYQ                  VP Y +VE RP+ E  L
Subjt:  EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQ-----------------AVPGYAIVEGRPVRERRL

Query:  PCCGIGIGWFL------------------------------------------FIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALI
        PCCG+G+GWFL                                          FI+GF   GIPWY GA ++L   VD+REK GYVAC+IA+++  +A++
Subjt:  PCCGIGIGWFL------------------------------------------FIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALI

Query:  LGVTKGVDVW
        LG+T  +++W
Subjt:  LGVTKGVDVW

AT1G53560.1 Ribosomal protein L18ae family2.1e-3752.52Show/hide
Query:  YGTFQGVANYPP------------VGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIV
        YGTFQGV  YPP            +G PQP  PPG S  +D S  Q Y   +Q V GY + +GRP R+ RLPCCG+G+GWFLFIIGF +  IPWY G  +
Subjt:  YGTFQGVANYPP------------VGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIV

Query:  ILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        ++C R+D REKPGYVACTIAA++ T+ ++ GV  G  VW
Subjt:  ILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAGGAGGAGAAAGCCGCCGCCGCCGCAGGGGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCAGTACGGCACCTTCCAAGGCGTCGCCAATTA
TCCTCCGGTCGGATTTCCCCAGCCTATTCGCCCACCCGGCGCCTCTGACTCCTATGATCCTTCTCAATCTCAGCCCTACGCTCATGCCTATCAAGCTGTCCCTGGATATG
CTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTTCATTATTGGTTTCTTCATTGTTGGCATCCCGTGGTAT
GCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGCTATTCTTGGCACACTTGCACTTATTCTTGGCGT
AACGAAGGGAGTTGATGTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAGGAGGAGAAAGCCGCCGCCGCCGCAGGGGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCAGTACGGCACCTTCCAAGGCGTCGCCAATTA
TCCTCCGGTCGGATTTCCCCAGCCTATTCGCCCACCCGGCGCCTCTGACTCCTATGATCCTTCTCAATCTCAGCCCTACGCTCATGCCTATCAAGCTGTCCCTGGATATG
CTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTTCATTATTGGTTTCTTCATTGTTGGCATCCCGTGGTAT
GCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGCTATTCTTGGCACACTTGCACTTATTCTTGGCGT
AACGAAGGGAGTTGATGTCTGGTAA
Protein sequenceShow/hide protein sequence
MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWY
AGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW