; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g12590 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g12590
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr11:9306351..9307049
RNA-Seq ExpressionMoc11g12590
SyntenyMoc11g12590
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]8.3e-2434.8Show/hide
Query:  DMLNWKDFEELVVFLWSLWNRRNAFVF-NKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQI-----HQAQNHTIWCPAEEGVFKLKTD
        D + W   EEL VFLW++WN RN  +F N       ++  WV+ Y+                V QS Q+   +      +    + WCP     FK+  D
Subjt:  DMLNWKDFEELVVFLWSLWNRRNAFVF-NKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQI-----HQAQNHTIWCPAEEGVFKLKTD

Query:  ASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQ
        A+F   +F+AGL  I+IRD    VL SA  ++ HV+ V  AE LAA EG+ +A+E G+ P  +ETDS +++NL   D E  S+ G +   ++ H+ + L 
Subjt:  ASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQ

Query:  V--SYSFTKRTGNTIAHLLARRALQSQ
        +   +SF  R GN+ AH LAR  + S+
Subjt:  V--SYSFTKRTGNTIAHLLARRALQSQ

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]7.5e-126100Show/hide
Query:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL
        MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL
Subjt:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL

Query:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT
        KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT
Subjt:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT

Query:  RLQVSYSFTKRTGNTIAHLLARRALQSQENFV
        RLQVSYSFTKRTGNTIAHLLARRALQSQENFV
Subjt:  RLQVSYSFTKRTGNTIAHLLARRALQSQENFV

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]9.8e-3345.11Show/hide
Query:  LAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAE
        L  W + Y+  F+  N+N       V+ + +            +W P ++ ++K+ TDASF + D +AGLG IIIR+ RGQV+ASATKYLE++ SVD AE
Subjt:  LAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAE

Query:  ALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQE
        A+ AVEGL++A + G++P++LETDS RI+NLF++  E LS+TG I+   K      L  S++F KR GN  AH+LARRAL  +E
Subjt:  ALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQE

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.7e-3341.3Show/hide
Query:  ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVE----DDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFK
        ILR+  + L+  DFEEL V +W LWN+RNA  FN           +L  W + Y   F+   +N  T           +++I       +W P +EG++K
Subjt:  ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVE----DDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFK

Query:  LKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLA
        + TDASF + D +AGLG+II  D RGQV+A+ATKYLE++ SVD AEA+AAVEGL++A E G+ P L                E LS+TG I+   K    
Subjt:  LKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLA

Query:  TRLQVSYSFTKRTGNTIAHLLARRALQSQE
          L  S++F KR GN  AH+LARRAL   E
Subjt:  TRLQVSYSFTKRTGNTIAHLLARRALQSQE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.4e-2334.21Show/hide
Query:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL
        M + +R W D+++W+    +VV LW++WN RN      +  +   L G +S  +    + + N+    Q   +S   +  + +     IW P    + K+
Subjt:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL

Query:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT
          DA+F    F AG+GV IIRD  G V  +A + L   + VD  E  A  EG+ +A+E G     +ETDSLRI+NL   D    S+ G +   +K  L++
Subjt:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT

Query:  RLQ-VSYSFTKRTGNTIAHLLARRALQS
          + VS+SFT R GN  AHLLA+ AL S
Subjt:  RLQ-VSYSFTKRTGNTIAHLLARRALQS

TrEMBL top hitse value%identityAlignment
A0A6J1C467 uncharacterized protein LOC1110077754.0e-2434.8Show/hide
Query:  DMLNWKDFEELVVFLWSLWNRRNAFVF-NKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQI-----HQAQNHTIWCPAEEGVFKLKTD
        D + W   EEL VFLW++WN RN  +F N       ++  WV+ Y+                V QS Q+   +      +    + WCP     FK+  D
Subjt:  DMLNWKDFEELVVFLWSLWNRRNAFVF-NKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQI-----HQAQNHTIWCPAEEGVFKLKTD

Query:  ASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQ
        A+F   +F+AGL  I+IRD    VL SA  ++ HV+ V  AE LAA EG+ +A+E G+ P  +ETDS +++NL   D E  S+ G +   ++ H+ + L 
Subjt:  ASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQ

Query:  V--SYSFTKRTGNTIAHLLARRALQSQ
        +   +SF  R GN+ AH LAR  + S+
Subjt:  V--SYSFTKRTGNTIAHLLARRALQSQ

A0A6J1CDQ4 uncharacterized protein LOC1110105333.6e-126100Show/hide
Query:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL
        MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL
Subjt:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL

Query:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT
        KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT
Subjt:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT

Query:  RLQVSYSFTKRTGNTIAHLLARRALQSQENFV
        RLQVSYSFTKRTGNTIAHLLARRALQSQENFV
Subjt:  RLQVSYSFTKRTGNTIAHLLARRALQSQENFV

A0A6J1CIF1 uncharacterized protein LOC1110112374.7e-3345.11Show/hide
Query:  LAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAE
        L  W + Y+  F+  N+N       V+ + +            +W P ++ ++K+ TDASF + D +AGLG IIIR+ RGQV+ASATKYLE++ SVD AE
Subjt:  LAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAE

Query:  ALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQE
        A+ AVEGL++A + G++P++LETDS RI+NLF++  E LS+TG I+   K      L  S++F KR GN  AH+LARRAL  +E
Subjt:  ALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQE

A0A6J1DAR4 uncharacterized protein LOC1110189542.8e-3341.3Show/hide
Query:  ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVE----DDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFK
        ILR+  + L+  DFEEL V +W LWN+RNA  FN           +L  W + Y   F+   +N  T           +++I       +W P +EG++K
Subjt:  ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVE----DDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFK

Query:  LKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLA
        + TDASF + D +AGLG+II  D RGQV+A+ATKYLE++ SVD AEA+AAVEGL++A E G+ P L                E LS+TG I+   K    
Subjt:  LKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLA

Query:  TRLQVSYSFTKRTGNTIAHLLARRALQSQE
          L  S++F KR GN  AH+LARRAL   E
Subjt:  TRLQVSYSFTKRTGNTIAHLLARRALQSQE

A0A6J1DBJ7 uncharacterized protein LOC1110189736.9e-2434.21Show/hide
Query:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL
        M + +R W D+++W+    +VV LW++WN RN      +  +   L G +S  +    + + N+    Q   +S   +  + +     IW P    + K+
Subjt:  MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKL

Query:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT
          DA+F    F AG+GV IIRD  G V  +A + L   + VD  E  A  EG+ +A+E G     +ETDSLRI+NL   D    S+ G +   +K  L++
Subjt:  KTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLAT

Query:  RLQ-VSYSFTKRTGNTIAHLLARRALQS
          + VS+SFT R GN  AHLLA+ AL S
Subjt:  RLQ-VSYSFTKRTGNTIAHLLARRALQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATATCTTAAGGGACTGGCGAGACATGTTAAATTGGAAAGATTTTGAGGAATTGGTTGTGTTTTTGTGGAGTTTATGGAATCGTAGAAATGCATTTGTG
TTTAATAAGAGAAGAGTTGAGGATGATGATTTGGCGGGATGGGTCAGTACTTACATTGCTACATTCAAGGCTACTAATACCAATCATGCAACAGCCAACCAAGAT
GTTAGTCAAAGTTTTCAACAATCTTCACAAATACATCAAGCTCAGAATCACACTATTTGGTGCCCAGCAGAAGAGGGGGTCTTTAAATTAAAGACAGATGCTTCT
TTTTCCTCTATCGATTTTAATGCAGGTCTGGGAGTCATCATCATCAGAGACCATAGAGGGCAAGTTCTAGCTTCGGCTACGAAATACTTGGAGCATGTGGCGTCC
GTGGATGATGCTGAAGCGCTTGCTGCAGTGGAAGGCCTTCGTGTGGCAATGGAGACTGGAATTTCTCCGATCCTTTTGGAAACTGACTCTTTGCGTATCTACAAT
CTTTTTGCTCGAGATAAAGAAGGCCTATCAAAGACGGGATCAATTATTGAATATGTGAAAACTCATCTTGCTACCAGATTGCAGGTATCCTATAGCTTCACAAAA
AGAACTGGAAATACGATCGCTCACCTTTTGGCGAGAAGAGCCCTCCAGTCTCAGGAAAATTTCGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAATATCTTAAGGGACTGGCGAGACATGTTAAATTGGAAAGATTTTGAGGAATTGGTTGTGTTTTTGTGGAGTTTATGGAATCGTAGAAATGCATTTGTG
TTTAATAAGAGAAGAGTTGAGGATGATGATTTGGCGGGATGGGTCAGTACTTACATTGCTACATTCAAGGCTACTAATACCAATCATGCAACAGCCAACCAAGAT
GTTAGTCAAAGTTTTCAACAATCTTCACAAATACATCAAGCTCAGAATCACACTATTTGGTGCCCAGCAGAAGAGGGGGTCTTTAAATTAAAGACAGATGCTTCT
TTTTCCTCTATCGATTTTAATGCAGGTCTGGGAGTCATCATCATCAGAGACCATAGAGGGCAAGTTCTAGCTTCGGCTACGAAATACTTGGAGCATGTGGCGTCC
GTGGATGATGCTGAAGCGCTTGCTGCAGTGGAAGGCCTTCGTGTGGCAATGGAGACTGGAATTTCTCCGATCCTTTTGGAAACTGACTCTTTGCGTATCTACAAT
CTTTTTGCTCGAGATAAAGAAGGCCTATCAAAGACGGGATCAATTATTGAATATGTGAAAACTCATCTTGCTACCAGATTGCAGGTATCCTATAGCTTCACAAAA
AGAACTGGAAATACGATCGCTCACCTTTTGGCGAGAAGAGCCCTCCAGTCTCAGGAAAATTTCGTCTAG
Protein sequenceShow/hide protein sequence
MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDAS
FSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTK
RTGNTIAHLLARRALQSQENFV