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Moc11g12690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g12690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF2431 domain-containing protein
Genome locationchr11:9374146..9374526
RNA-Seq ExpressionMoc11g12690
SyntenyMoc11g12690
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0070042 - rRNA (uridine-N3-)-methyltransferase activity (molecular function)
InterPro domainsIPR019446 - Domain of unknown function DUF2431


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592122.1 hypothetical protein SDJN03_14468, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2364.77Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA  F +A N+VATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQHPLLCH LFDRIVFNFPH GFQY REH+ +QI+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

KAG7024996.1 hypothetical protein SDJN02_13816, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2265.91Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA AF +A N+VATSLDS+E LLRKY +++ T LE L+E GC+ +H VD T+MSQHPLLCH LFDRIVFNFPH GFQY  EH+ +QI+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

XP_022139691.1 uncharacterized protein At4g26485-like [Momordica charantia]4.3e-2572.41Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA  F SAANMVATSLDSKE+LL KY +VATNL+ LEE GCT  H+VDATSMSQHPLL H+ FDR+VFNFPH GF +F+E D +QIE
Subjt:  LARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

XP_022976038.1 uncharacterized protein At4g26485 isoform X1 [Cucurbita maxima]5.8e-2264.77Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA AF +A NMVATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQH LLCH  FDRIVFNFPH GFQY REH+  QI+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

XP_022976039.1 uncharacterized protein At4g26485 isoform X2 [Cucurbita maxima]5.8e-2264.77Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA AF +A NMVATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQH LLCH  FDRIVFNFPH GFQY REH+  QI+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

TrEMBL top hitse value%identityAlignment
A0A6J1CDH1 uncharacterized protein At4g26485-like2.1e-2572.41Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA  F SAANMVATSLDSKE+LL KY +VATNL+ LEE GCT  H+VDATSMSQHPLL H+ FDR+VFNFPH GF +F+E D +QIE
Subjt:  LARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

A0A6J1F9M1 uncharacterized protein At4g26485 isoform X21.8e-2166.67Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFRE
        LA AF +A N+VATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQHPLLCH LFDRIVFNFPH GFQY R+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFRE

A0A6J1FEI5 uncharacterized protein At4g26485 isoform X11.8e-2166.67Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFRE
        LA AF +A N+VATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQHPLLCH LFDRIVFNFPH GFQY R+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFRE

A0A6J1IKX9 uncharacterized protein At4g26485 isoform X12.8e-2264.77Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA AF +A NMVATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQH LLCH  FDRIVFNFPH GFQY REH+  QI+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

A0A6J1IME0 uncharacterized protein At4g26485 isoform X22.8e-2264.77Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE
        LA AF +A NMVATSLDS+E LLRKY +++ T LE L+E GC+ +H VD  +MSQH LLCH  FDRIVFNFPH GFQY REH+  QI+
Subjt:  LARAFDSAANMVATSLDSKEALLRKY-NNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE

SwissProt top hitse value%identityAlignment
F4I1X0 Heavy metal-associated isoprenylated plant protein 411.2e-1449.4Show/hide
Query:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHD
        SLA  F SA+N+ A+SLDS + ++RKY    +NL+ L+  G   LH VDAT++  HP L +  FDR++FNFPH GF + RE D
Subjt:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHD

O94480 25S rRNA (uridine-N(3))-methyltransferase4.2e-0743.75Show/hide
Query:  MVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVG
        ++ATS DSKE L +KY + A  +  +E  G   +HE+DAT +  H  L  + FD I +NFPH G
Subjt:  MVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVG

P0C8L4 Uncharacterized protein At4g264851.7e-1347.73Show/hide
Query:  LARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYF-REHDYQQIE
        LA AF SA N+ ATSLDS++ L  KY +   N+ +L+ +GC   HEVD  +MS    L  + +DRIVFNFPH G ++F RE   + IE
Subjt:  LARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYF-REHDYQQIE

Arabidopsis top hitse value%identityAlignment
AT1G55790.1 Domain of unknown function (DUF2431)8.6e-1649.4Show/hide
Query:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHD
        SLA  F SA+N+ A+SLDS + ++RKY    +NL+ L+  G   LH VDAT++  HP L +  FDR++FNFPH GF + RE D
Subjt:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHD

AT1G55800.1 Domain of unknown function (DUF2431)1.5e-1238.26Show/hide
Query:  SLARAFDSAANMVATSLDS---------------------------KEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPH
        SLA  F SA+N+ A+SLDS                            + ++RKY N  +NLE L+  G   LH VDAT++  HP L +  FDR++FNFPH
Subjt:  SLARAFDSAANMVATSLDS---------------------------KEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPH

Query:  VGFQYFREHDYQQIE
         GF + +E D  QI+
Subjt:  VGFQYFREHDYQQIE

AT4G26485.1 Domain of unknown function (DUF2431)4.4e-1245.57Show/hide
Query:  NMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYF-REHDYQQIE
        N+ ATSLDS++ L  KY +   N+ +L+ +GC   HEVD  +MS    L  + +DRIVFNFPH G ++F RE   + IE
Subjt:  NMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYF-REHDYQQIE

AT5G25030.1 Domain of unknown function (DUF2431)4.4e-1249.33Show/hide
Query:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVG
        SLA+A  SA N+ A SLD +E L R YNN   N+E LE  GCT +  V+  SM     L H  +D I+FNFPH G
Subjt:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVG

AT5G56060.1 Domain of unknown function (DUF2431)9.5e-1551.81Show/hide
Query:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHD
        SLAR F SA N+ ATSLD++E L  KY +   N+E LE FGCT +H V+  SMS    L    +DRI+FNFPH G  +  EHD
Subjt:  SLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGTCACTACAGCAGCTCTCACAGAATACTCCTTCCCTGGCCAGAGCTTTCGACTCTGCCGCTAACATGGTCGCCACTTCCCTCGACTCTAAAGAGGCACTGTT
GAGAAAGTACAACAATGTTGCAACAAACTTGGAAGTCTTGGAGGAGTTCGGGTGCACGGCCCTGCATGAAGTGGATGCGACGTCGATGAGCCAACATCCACTTCTCTGTC
ACGAGTTATTCGATCGCATTGTGTTCAACTTCCCGCATGTTGGGTTTCAATACTTTAGAGAACATGACTACCAGCAAATTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGTCACTACAGCAGCTCTCACAGAATACTCCTTCCCTGGCCAGAGCTTTCGACTCTGCCGCTAACATGGTCGCCACTTCCCTCGACTCTAAAGAGGCACTGTT
GAGAAAGTACAACAATGTTGCAACAAACTTGGAAGTCTTGGAGGAGTTCGGGTGCACGGCCCTGCATGAAGTGGATGCGACGTCGATGAGCCAACATCCACTTCTCTGTC
ACGAGTTATTCGATCGCATTGTGTTCAACTTCCCGCATGTTGGGTTTCAATACTTTAGAGAACATGACTACCAGCAAATTGAGTGA
Protein sequenceShow/hide protein sequence
MDRSLQQLSQNTPSLARAFDSAANMVATSLDSKEALLRKYNNVATNLEVLEEFGCTALHEVDATSMSQHPLLCHELFDRIVFNFPHVGFQYFREHDYQQIE