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Moc11g13530 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g13530
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMYB transcription factor
Genome locationchr11:9993048..9994493
RNA-Seq ExpressionMoc11g13530
SyntenyMoc11g13530
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TKY74179.1 Transcription factor MYB44 [Spatholobus suberectus]3.6e-5473.24Show/hide
Query:  STPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNA
        S+ G+D K+ PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNA
Subjt:  STPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNA

Query:  VKNHWHVIIARKHRQHFKIHGGGRFP--YGPTTAGVFFRQKS
        VKNHWHVI+ARK R+  K+ G   F   Y  +T   F  +++
Subjt:  VKNHWHVIIARKHRQHFKIHGGGRFP--YGPTTAGVFFRQKS

TXG53086.1 hypothetical protein EZV62_022255 [Acer yangbiense]1.6e-5477.94Show/hide
Query:  DAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGR
        D+ A++  D  KS PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGR
Subjt:  DAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGR

Query:  TDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTA
        TDNAVKNHWHVI+ARK R+  KI  GG+  Y  TT+
Subjt:  TDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTA

XP_010260471.1 PREDICTED: myb-related protein 3R-1-like [Nelumbo nucifera]1.1e-5580.95Show/hide
Query:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
        M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERL+AAHR+HGNKWALIARL PG
Subjt:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG

Query:  RTDNAVKNHWHVIIARKHRQHFKIHG
        RTDNAVKNHWHV++ARKHR+  K+HG
Subjt:  RTDNAVKNHWHVIIARKHRQHFKIHG

XP_010270380.1 PREDICTED: transcription factor MYB23 [Nelumbo nucifera]5.5e-5580.95Show/hide
Query:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
        M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PG
Subjt:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG

Query:  RTDNAVKNHWHVIIARKHRQHFKIHG
        RTDNAVKNHWHVI+ARKHR+  K++G
Subjt:  RTDNAVKNHWHVIIARKHRQHFKIHG

XP_022153715.1 transcription factor MYB52-like [Momordica charantia]1.6e-102100Show/hide
Query:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
        MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
Subjt:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG

Query:  RTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK
        RTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK
Subjt:  RTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK

TrEMBL top hitse value%identityAlignment
A0A1U8A2L0 myb-related protein 3R-1-like5.4e-5680.95Show/hide
Query:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
        M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERL+AAHR+HGNKWALIARL PG
Subjt:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG

Query:  RTDNAVKNHWHVIIARKHRQHFKIHG
        RTDNAVKNHWHV++ARKHR+  K+HG
Subjt:  RTDNAVKNHWHVIIARKHRQHFKIHG

A0A1U8AR74 transcription factor MYB232.7e-5580.95Show/hide
Query:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
        M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PG
Subjt:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG

Query:  RTDNAVKNHWHVIIARKHRQHFKIHG
        RTDNAVKNHWHVI+ARKHR+  K++G
Subjt:  RTDNAVKNHWHVIIARKHRQHFKIHG

A0A371FX08 Transcription factor MYB523.8e-5472.54Show/hide
Query:  STPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNA
        S+ G+D K+ PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNA
Subjt:  STPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNA

Query:  VKNHWHVIIARKHRQHFKIHGGGRF--PYGPTTAGVFFRQKS
        VKNHWHVI+ARK R+  K+ G   F   Y  +    F  +++
Subjt:  VKNHWHVIIARKHRQHFKIHGGGRF--PYGPTTAGVFFRQKS

A0A5C7HA55 Uncharacterized protein7.7e-5577.94Show/hide
Query:  DAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGR
        D+ A++  D  KS PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGR
Subjt:  DAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGR

Query:  TDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTA
        TDNAVKNHWHVI+ARK R+  KI  GG+  Y  TT+
Subjt:  TDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTA

A0A6J1DHL3 transcription factor MYB52-like7.6e-103100Show/hide
Query:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
        MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG
Subjt:  MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPG

Query:  RTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK
        RTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK
Subjt:  RTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK

SwissProt top hitse value%identityAlignment
Q5NBM8 Transcription factor CSA2.3e-4879.46Show/hide
Query:  GDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKN
        G  GK   RGHWRPAED KL+ LV Q+G +NWN IAEKL GRSGKSCRLRWFNQLDPRINRR F+EEEEERLMAAHR +GNKWALIARL PGRTDNAVKN
Subjt:  GDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKN

Query:  HWHVIIARKHRQ
        HWHV++AR+HR+
Subjt:  HWHVIIARKHRQ

Q6R0C4 Transcription factor MYB523.0e-4875.89Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAEDEKL+ LV+QFG  NWN+IA+KL GRSGKSCRLRWFNQLDPRINR PF+EEEEERL+A+HRIHGN+W++IAR  PGRTDNAVKNHWHVI+AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQHFKIHGGG
        + R+  K+   G
Subjt:  KHRQHFKIHGGG

Q9FX36 Transcription factor MYB548.0e-4961.15Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAEDEKL+ LV+Q+G  NWN+IA KL GRSGKSCRLRWFNQLDPRINR PF+EEEEERL+AAHRIHGN+W++IARL PGRTDNAVKNHWHVI+AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF
        + RQ  K     R     T++      +  ++ +     +  S D K I P  FI+F
Subjt:  KHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF

Q9LQX5 Transcription factor MYB1172.6e-4780Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQH
        K+R+H
Subjt:  KHRQH

Q9SEZ4 Transcription factor MYB1053.7e-4676.99Show/hide
Query:  GDDGKSS-PRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVK
        G   K+S  RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VK
Subjt:  GDDGKSS-PRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVK

Query:  NHWHVIIARKHRQ
        NHWHVI+ARK R+
Subjt:  NHWHVIIARKHRQ

Arabidopsis top hitse value%identityAlignment
AT1G17950.1 myb domain protein 522.2e-4975.89Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAEDEKL+ LV+QFG  NWN+IA+KL GRSGKSCRLRWFNQLDPRINR PF+EEEEERL+A+HRIHGN+W++IAR  PGRTDNAVKNHWHVI+AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQHFKIHGGG
        + R+  K+   G
Subjt:  KHRQHFKIHGGG

AT1G26780.1 myb domain protein 1171.8e-4880Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQH
        K+R+H
Subjt:  KHRQH

AT1G26780.2 myb domain protein 1171.8e-4880Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQH
        K+R+H
Subjt:  KHRQH

AT1G69560.1 myb domain protein 1052.6e-4776.99Show/hide
Query:  GDDGKSS-PRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVK
        G   K+S  RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VK
Subjt:  GDDGKSS-PRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVK

Query:  NHWHVIIARKHRQ
        NHWHVI+ARK R+
Subjt:  NHWHVIIARKHRQ

AT1G73410.1 myb domain protein 545.7e-5061.15Show/hide
Query:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR
        RGHWRPAEDEKL+ LV+Q+G  NWN+IA KL GRSGKSCRLRWFNQLDPRINR PF+EEEEERL+AAHRIHGN+W++IARL PGRTDNAVKNHWHVI+AR
Subjt:  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIAR

Query:  KHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF
        + RQ  K     R     T++      +  ++ +     +  S D K I P  FI+F
Subjt:  KHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCGCTGCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGC
CCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTG
AAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGG
CACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGAT
CATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCGCTGCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGC
CCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTG
AAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGG
CACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGAT
CATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAAT
AA
Protein sequenceShow/hide protein sequence
MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHW
HVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK