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Moc11g14090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g14090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionKeratin, type II cytoskeletal 1-like
Genome locationchr11:10460665..10461770
RNA-Seq ExpressionMoc11g14090
SyntenyMoc11g14090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.1e-1240.87Show/hide
Query:  LSSTPINDGVTSLLGQS--NLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQDKILSS
        +SST    GV +    S  N +    N+I ++KL D+ +LLWKFQ+LT ++   L  +++   EP S++L  T    +S+    NPAY  W +QD+++SS
Subjt:  LSSTPINDGVTSLLGQS--NLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQDKILSS

Query:  WLLGSMTEDILVQMV
        WLLGSM+E+IL QM+
Subjt:  WLLGSMTEDILVQMV

KAA0067213.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.1e-1236.67Show/hide
Query:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD
        S +++  + +T  +  +  + G S       N+I ++KL+D+N+LLWKFQ+LT ++   L  +++   EP S++L  T    +S+    NP Y  W +QD
Subjt:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD

Query:  KILSSWLLGSMTEDILVQMV
        +++SSWLLGSM+E+IL QM+
Subjt:  KILSSWLLGSMTEDILVQMV

TYK18917.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.1e-1236.67Show/hide
Query:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD
        S +++  + +T  +  +  + G S       N+I ++KL+D+N+LLWKFQ+LT ++   L  +++   EP S++L  T    +S+    NP Y  W +QD
Subjt:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD

Query:  KILSSWLLGSMTEDILVQMV
        +++SSWLLGSM+E+IL QM+
Subjt:  KILSSWLLGSMTEDILVQMV

XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia]1.6e-1645.3Show/hide
Query:  MASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEI--NPAYDSWVQQDKILS
        MASLSS   +D    +  Q++   N  +++ +++L D+N LLWKFQ+ T +QG  L  YI   E+  +QF+  T  E SSS +  NPAY  W++QDK++S
Subjt:  MASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEI--NPAYDSWVQQDKILS

Query:  SWLLGSMTEDILVQMVE
        +WLLGSM EDIL QM++
Subjt:  SWLLGSMTEDILVQMVE

XP_022159146.1 uncharacterized protein LOC111025572 [Momordica charantia]8.3e-1340.2Show/hide
Query:  TSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEINPAYDSWVQQDKILSSWLLGSMTEDILVQM
        ++++ Q++ + N  N+I  IKL D N+LLW+ Q+ T +QG  L K+I    +  S+F+    +  S    NP + +W +QDK+++SWLLGSM+E+IL QM
Subjt:  TSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEINPAYDSWVQQDKILSSWLLGSMTEDILVQM

Query:  VE
        +E
Subjt:  VE

TrEMBL top hitse value%identityAlignment
A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-1240.87Show/hide
Query:  LSSTPINDGVTSLLGQS--NLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQDKILSS
        +SST    GV +    S  N +    N+I ++KL D+ +LLWKFQ+LT ++   L  +++   EP S++L  T    +S+    NPAY  W +QD+++SS
Subjt:  LSSTPINDGVTSLLGQS--NLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQDKILSS

Query:  WLLGSMTEDILVQMV
        WLLGSM+E+IL QM+
Subjt:  WLLGSMTEDILVQMV

A0A5A7VGJ8 Keratin, type II cytoskeletal 1-like5.3e-1336.67Show/hide
Query:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD
        S +++  + +T  +  +  + G S       N+I ++KL+D+N+LLWKFQ+LT ++   L  +++   EP S++L  T    +S+    NP Y  W +QD
Subjt:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD

Query:  KILSSWLLGSMTEDILVQMV
        +++SSWLLGSM+E+IL QM+
Subjt:  KILSSWLLGSMTEDILVQMV

A0A5D3D5T2 Keratin, type II cytoskeletal 1-like5.3e-1336.67Show/hide
Query:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD
        S +++  + +T  +  +  + G S       N+I ++KL+D+N+LLWKFQ+LT ++   L  +++   EP S++L  T    +S+    NP Y  W +QD
Subjt:  SFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSS--EINPAYDSWVQQD

Query:  KILSSWLLGSMTEDILVQMV
        +++SSWLLGSM+E+IL QM+
Subjt:  KILSSWLLGSMTEDILVQMV

A0A6J1DLT9 uncharacterized protein LOC1110217577.9e-1745.3Show/hide
Query:  MASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEI--NPAYDSWVQQDKILS
        MASLSS   +D    +  Q++   N  +++ +++L D+N LLWKFQ+ T +QG  L  YI   E+  +QF+  T  E SSS +  NPAY  W++QDK++S
Subjt:  MASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEI--NPAYDSWVQQDKILS

Query:  SWLLGSMTEDILVQMVE
        +WLLGSM EDIL QM++
Subjt:  SWLLGSMTEDILVQMVE

A0A6J1E314 uncharacterized protein LOC1110255724.0e-1340.2Show/hide
Query:  TSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEINPAYDSWVQQDKILSSWLLGSMTEDILVQM
        ++++ Q++ + N  N+I  IKL D N+LLW+ Q+ T +QG  L K+I    +  S+F+    +  S    NP + +W +QDK+++SWLLGSM+E+IL QM
Subjt:  TSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVLTTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEINPAYDSWVQQDKILSSWLLGSMTEDILVQM

Query:  VE
        +E
Subjt:  VE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGGATGGTGAGCTCTGGATACCGCACAGAAGACCTGCAAAACAAAGTAAGCAATCCGATGCCAAAGTCAGTAAGTGTCCAAATCAACTCGAGAGAGAGA
ATTGGGTTGCTCGAGTACCTCAAAATGAAGCGGAGTGGTTCTATTTATAGCTATAGCTTTACAGCAATGGCTTCCTTAAGCTCAACACCAATTAACGATGGAGTC
ACATCCCTTCTAGGGCAGAGTAATCTAGTGACAAACATGAGAAATCGTATTCTAGTGATTAAACTCACTGACAACAATTACTTGTTGTGGAAATTTCAAGTATTA
ACAACCATTCAAGGGCTTTGCCTACTGAAATACATCAAAGGAGCTGAAGAACCAACATCACAATTTCTCAACCAGACAACTCAAGAATGCTCCAGTTCTGAAATA
AATCCAGCATACGATTCTTGGGTTCAACAAGACAAAATACTCTCATCATGGCTCTTAGGATCTATGACAGAAGATATTCTTGTGCAAATGGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGGATGGTGAGCTCTGGATACCGCACAGAAGACCTGCAAAACAAAGTAAGCAATCCGATGCCAAAGTCAGTAAGTGTCCAAATCAACTCGAGAGAGAGA
ATTGGGTTGCTCGAGTACCTCAAAATGAAGCGGAGTGGTTCTATTTATAGCTATAGCTTTACAGCAATGGCTTCCTTAAGCTCAACACCAATTAACGATGGAGTC
ACATCCCTTCTAGGGCAGAGTAATCTAGTGACAAACATGAGAAATCGTATTCTAGTGATTAAACTCACTGACAACAATTACTTGTTGTGGAAATTTCAAGTATTA
ACAACCATTCAAGGGCTTTGCCTACTGAAATACATCAAAGGAGCTGAAGAACCAACATCACAATTTCTCAACCAGACAACTCAAGAATGCTCCAGTTCTGAAATA
AATCCAGCATACGATTCTTGGGTTCAACAAGACAAAATACTCTCATCATGGCTCTTAGGATCTATGACAGAAGATATTCTTGTGCAAATGGTTGAATGA
Protein sequenceShow/hide protein sequence
MSWMVSSGYRTEDLQNKVSNPMPKSVSVQINSRERIGLLEYLKMKRSGSIYSYSFTAMASLSSTPINDGVTSLLGQSNLVTNMRNRILVIKLTDNNYLLWKFQVL
TTIQGLCLLKYIKGAEEPTSQFLNQTTQECSSSEINPAYDSWVQQDKILSSWLLGSMTEDILVQMVE