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Moc11g14310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g14310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:10631279..10633647
RNA-Seq ExpressionMoc11g14310
SyntenyMoc11g14310
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]8.0e-1886.21Show/hide
Query:  GEPVAGLIKATDLSGEARPSPGHRLNSTTFDRGEPAEEVESVPLTAEDRRVNIGTKLG
        GEPV GL KATDLSGEARPSPGHRLNSTT DRG  AEEVESVPLT E++RVNIGTKLG
Subjt:  GEPVAGLIKATDLSGEARPSPGHRLNSTTFDRGEPAEEVESVPLTAEDRRVNIGTKLG

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]2.6e-6194.62Show/hide
Query:  MNPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNST
        MNPDESHRCFEE+SLK+AADHLDEARPSPDRQLNPTTLDGGEPVSG NKATDLSGKARPSPG RLNPTTLDKG PVAGLIKATDLSG+ARPSPGHRLNST
Subjt:  MNPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNST

Query:  TFDRGEPAEEVESVPLTAEDRRVNIGTKLG
        T DRGEPAEEVESVPLTAEDRRVNIGTKLG
Subjt:  TFDRGEPAEEVESVPLTAEDRRVNIGTKLG

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]4.4e-1647.29Show/hide
Query:  NPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNSTT
        NP E  +CFEEESL+ AA+ L E  PSPD Q NPTT D GEPV G                  +    L  G+      +A D  GE   SP    + T 
Subjt:  NPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNSTT

Query:  FDRGEPAEEVESVPLTAEDRRVNIGTKLG
        FDRGEP +EVES+PLT++DRRVNIGT+LG
Subjt:  FDRGEPAEEVESVPLTAEDRRVNIGTKLG

TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230163.9e-1886.21Show/hide
Query:  GEPVAGLIKATDLSGEARPSPGHRLNSTTFDRGEPAEEVESVPLTAEDRRVNIGTKLG
        GEPV GL KATDLSGEARPSPGHRLNSTT DRG  AEEVESVPLT E++RVNIGTKLG
Subjt:  GEPVAGLIKATDLSGEARPSPGHRLNSTTFDRGEPAEEVESVPLTAEDRRVNIGTKLG

A0A6J1DVC6 Ribonuclease H1.3e-6194.62Show/hide
Query:  MNPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNST
        MNPDESHRCFEE+SLK+AADHLDEARPSPDRQLNPTTLDGGEPVSG NKATDLSGKARPSPG RLNPTTLDKG PVAGLIKATDLSG+ARPSPGHRLNST
Subjt:  MNPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNST

Query:  TFDRGEPAEEVESVPLTAEDRRVNIGTKLG
        T DRGEPAEEVESVPLTAEDRRVNIGTKLG
Subjt:  TFDRGEPAEEVESVPLTAEDRRVNIGTKLG

A0A6J1DW49 uncharacterized protein LOC1110246212.1e-1647.29Show/hide
Query:  NPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNSTT
        NP E  +CFEEESL+ AA+ L E  PSPD Q NPTT D GEPV G                  +    L  G+      +A D  GE   SP    + T 
Subjt:  NPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNSTT

Query:  FDRGEPAEEVESVPLTAEDRRVNIGTKLG
        FDRGEP +EVES+PLT++DRRVNIGT+LG
Subjt:  FDRGEPAEEVESVPLTAEDRRVNIGTKLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGAGGAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCAC
CCTTGACGGGGGAGAACCAGTGTCAGGTCCGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTGTCGACTTAATCCCACCACCCTTGATAAGGGAG
AACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCTTTGATAGGGGAGAACCGGCTGAAGAG
GTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAGAAGCCATGGATATCGACAATCAAGGGCAACCAGAAGAAAACTGGAAGA
GCCATTTGATCAAATATTTGAAAGATGGGATCCTGCCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGAGGAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCAC
CCTTGACGGGGGAGAACCAGTGTCAGGTCCGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTGTCGACTTAATCCCACCACCCTTGATAAGGGAG
AACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCTTTGATAGGGGAGAACCGGCTGAAGAG
GTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAGAAGCCATGGATATCGACAATCAAGGGCAACCAGAAGAAAACTGGAAGA
GCCATTTGATCAAATATTTGAAAGATGGGATCCTGCCTACTGA
Protein sequenceShow/hide protein sequence
MNPDESHRCFEEESLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGPNKATDLSGKARPSPGCRLNPTTLDKGEPVAGLIKATDLSGEARPSPGHRLNSTTFDRGEPAEE
VESVPLTAEDRRVNIGTKLGRSHGYRQSRATRRKLEEPFDQIFERWDPAY