; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g14320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g14320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSWIM-type domain-containing protein
Genome locationchr11:10633685..10636279
RNA-Seq ExpressionMoc11g14320
SyntenyMoc11g14320
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GBP14842.1 hypothetical protein EVAR_75430_1 [Eumeta japonica]2.9e-0866.04Show/hide
Query:  LGPDLVLGPDPVLGPDPVLDPDPVLGVDPVLGPDPGLGPEPCSAHGPASDPPS
        LGPDLVLGPDPVLGPDP LDPDP L  DP LGPDP L  +P     PA   P+
Subjt:  LGPDLVLGPDPVLGPDPVLDPDPVLGVDPVLGPDPGLGPEPCSAHGPASDPPS

KAF7143828.1 hypothetical protein RHSIM_Rhsim05G0156600 [Rhododendron simsii]1.4e-0739.47Show/hide
Query:  FDRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGSP
        FD  +    +  + +V  V++DF  N+SR Q Y AR+  +RK+EG +E QYAK+WDY  E++R + G+S  +   P
Subjt:  FDRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGSP

KAG5522743.1 hypothetical protein RHGRI_034780 [Rhododendron griersonianum]2.9e-0834.23Show/hide
Query:  FDRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGSP--------------LSHEGLGPDL
        FD  +   ++  + +V+ VR+DF  N+SR Q Y AR+  +RK+EGR+E QYAK+WDY  E++R +  +S  +   P              +  E L    
Subjt:  FDRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGSP--------------LSHEGLGPDL

Query:  VLGPDPVLGPD
        V G  P++G D
Subjt:  VLGPDPVLGPD

ONI01883.1 hypothetical protein PRUPE_6G164700 [Prunus persica]1.4e-0740Show/hide
Query:  LLSSFDR-FKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGS
        L   FD   +T  ++     + LVRK ++IN++R Q Y+A+ +A   ++G IE QY+K+WDY E+L+R + GS+ L+K S
Subjt:  LLSSFDR-FKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGS

XP_022156713.1 uncharacterized protein LOC111023558 [Momordica charantia]2.5e-1278.18Show/hide
Query:  LVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLL
        LVRKDFNINISRHQAYRARKIAM KLEG +EMQYAK+ DY EEL R +  SS LL
Subjt:  LVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLL

TrEMBL top hitse value%identityAlignment
A0A251NRG0 SWIM-type domain-containing protein6.9e-0840Show/hide
Query:  LLSSFDR-FKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGS
        L   FD   +T  ++     + LVRK ++IN++R Q Y+A+ +A   ++G IE QY+K+WDY E+L+R + GS+ L+K S
Subjt:  LLSSFDR-FKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGS

A0A2N9HUS0 Uncharacterized protein2.6e-0748.61Show/hide
Query:  DRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLK
        +R   Q D+    I + V K F +NISR +AYRA+KIA+ K+EG  + QY++I DY  EL R + GSS LLK
Subjt:  DRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLK

A0A4C1TJZ3 Uncharacterized protein1.4e-0866.04Show/hide
Query:  LGPDLVLGPDPVLGPDPVLDPDPVLGVDPVLGPDPGLGPEPCSAHGPASDPPS
        LGPDLVLGPDPVLGPDP LDPDP L  DP LGPDP L  +P     PA   P+
Subjt:  LGPDLVLGPDPVLGPDPVLDPDPVLGVDPVLGPDPGLGPEPCSAHGPASDPPS

A0A6J1DRD2 uncharacterized protein LOC1110235581.2e-1278.18Show/hide
Query:  LVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLL
        LVRKDFNINISRHQAYRARKIAM KLEG +EMQYAK+ DY EEL R +  SS LL
Subjt:  LVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLL

M5XAA0 Uncharacterized protein6.9e-0840Show/hide
Query:  LLSSFDR-FKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGS
        L   FD   +T  ++     + LVRK ++IN++R Q Y+A+ +A   ++G IE QY+K+WDY E+L+R + GS+ L+K S
Subjt:  LLSSFDR-FKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTACGTACCAAATTAAGACAACCAATAAGCATGCAACGGCTAGTTGGCTTGCTGAGCAGTTTTGACAGATTTAAGACTCAACTGGATGTGGATTGGAGAGCAAT
TGTAGATCTTGTGAGGAAGGACTTTAATATTAACATCTCAAGGCATCAAGCATATAGAGCAAGGAAGATTGCAATGCGTAAGCTTGAAGGTAGAATTGAGATGCAATATG
CCAAGATATGGGATTACAGTGAGGAATTGAGGAGATATAGTTCTGGTAGTTCTTGTTTACTAAAGGGAAGCCCACTGAGCCACGAAGGGCTCGGCCCCGACCTGGTGCTC
GGCCCCGACCCGGTGCTCGGCCCCGACCCGGTGCTCGACCCCGACCCGGTGCTCGGCGTCGACCCGGTGCTCGGCCCCGACCCGGGGCTTGGTCCCGAGCCGTGCTCGGC
CCACGGCCCAGCCAGTGATCCCCCGTCTTCGATCGACGATGTCGCCCAGGCCCTGCAACGGTGCATTAGGGTACTAGTCCCGGATCAACAAGTTTGGTGGATGCGAGGTA
GTGAACCGGAGGACCGAAATCCACGCATCAACAATTGGCGCCGTCTGTGGGGACGATACAGCAAAACGAGTTTCGTCGAAGCAAAATCCCGATCTGAGGTGAAATTTCGA
TCCAAGGCGTGTAGGGTGCAGTGGCCGACCATTCAGGCGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTACGTACCAAATTAAGACAACCAATAAGCATGCAACGGCTAGTTGGCTTGCTGAGCAGTTTTGACAGATTTAAGACTCAACTGGATGTGGATTGGAGAGCAAT
TGTAGATCTTGTGAGGAAGGACTTTAATATTAACATCTCAAGGCATCAAGCATATAGAGCAAGGAAGATTGCAATGCGTAAGCTTGAAGGTAGAATTGAGATGCAATATG
CCAAGATATGGGATTACAGTGAGGAATTGAGGAGATATAGTTCTGGTAGTTCTTGTTTACTAAAGGGAAGCCCACTGAGCCACGAAGGGCTCGGCCCCGACCTGGTGCTC
GGCCCCGACCCGGTGCTCGGCCCCGACCCGGTGCTCGACCCCGACCCGGTGCTCGGCGTCGACCCGGTGCTCGGCCCCGACCCGGGGCTTGGTCCCGAGCCGTGCTCGGC
CCACGGCCCAGCCAGTGATCCCCCGTCTTCGATCGACGATGTCGCCCAGGCCCTGCAACGGTGCATTAGGGTACTAGTCCCGGATCAACAAGTTTGGTGGATGCGAGGTA
GTGAACCGGAGGACCGAAATCCACGCATCAACAATTGGCGCCGTCTGTGGGGACGATACAGCAAAACGAGTTTCGTCGAAGCAAAATCCCGATCTGAGGTGAAATTTCGA
TCCAAGGCGTGTAGGGTGCAGTGGCCGACCATTCAGGCGTGGTAG
Protein sequenceShow/hide protein sequence
MNVRTKLRQPISMQRLVGLLSSFDRFKTQLDVDWRAIVDLVRKDFNINISRHQAYRARKIAMRKLEGRIEMQYAKIWDYSEELRRYSSGSSCLLKGSPLSHEGLGPDLVL
GPDPVLGPDPVLDPDPVLGVDPVLGPDPGLGPEPCSAHGPASDPPSSIDDVAQALQRCIRVLVPDQQVWWMRGSEPEDRNPRINNWRRLWGRYSKTSFVEAKSRSEVKFR
SKACRVQWPTIQAW