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Moc11g14950 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g14950
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:11152074..11153389
RNA-Seq ExpressionMoc11g14950
SyntenyMoc11g14950
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.6e-6374.16Show/hide
Query:  MRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNP
        MRT+M +ME+MY++M+  AGA SR ENRV R  + EQRG HLGPV++ HPE  E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS NP
Subjt:  MRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNP

Query:  VTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV
        +TP GVITREEFDQL+ + DAQVEALKAKCE+KE   +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYV
Subjt:  VTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]2.9e-4693.46Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESS NP TPAGVITREEFDQLRG+LDAQVEALKAKCEQKEG LNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

Query:  KDPKDYV
        +DPKDYV
Subjt:  KDPKDYV

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]3.5e-4476.38Show/hide
Query:  DNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV
        + E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS NP+TP  VITREEFDQL+ + DAQVEALKA CE+KE   +DGDLGE PFT D+
Subjt:  DNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKPYDGSKDPKDYV
        LEAPI PKFK PT+KPYDGSK+PKDYV
Subjt:  LEAPIPPKFKAPTVKPYDGSKDPKDYV

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]7.4e-5061.88Show/hide
Query:  MEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRT+MR+MEEMYNKM+ +AGA SR  ++V    + EQ   H  PV+EEH             GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  RNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV
         NP+ P GVITREEF+QL+ + DAQVEALK +CE+KE   +DGDLGESPFTSD+LEA IPPKFK PT+K YDGSKDPKDYV
Subjt:  RNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]4.2e-6159.91Show/hide
Query:  RGRHESPPVLPPAHPPRTSKATRGRGGTSKKGARGPAPAPTSENLDALQREMEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVE
        R    + P L PAH P+  KA RGRGG S++   G APAP+ EN DALQ+EMEAMRT+M +MEEMYN+M+   GAGSR E+R  R               
Subjt:  RGRHESPPVLPPAHPPRTSKATRGRGGTSKKGARGPAPAPTSENLDALQREMEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVE

Query:  EEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESP
                      +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS NPV P GVITREEFDQL+ + DAQVE LKA+CE K    +DGDLGESP
Subjt:  EEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESP

Query:  FTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV
        FTSD+LEA IP KFK PT+KPYDGSKDPKDYV
Subjt:  FTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198421.4e-4693.46Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESS NP TPAGVITREEFDQLRG+LDAQVEALKAKCEQKEG LNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

Query:  KDPKDYV
        +DPKDYV
Subjt:  KDPKDYV

A0A6J1DDW5 uncharacterized protein LOC1110196341.3e-6374.16Show/hide
Query:  MRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNP
        MRT+M +ME+MY++M+  AGA SR ENRV R  + EQRG HLGPV++ HPE  E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS NP
Subjt:  MRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNP

Query:  VTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV
        +TP GVITREEFDQL+ + DAQVEALKAKCE+KE   +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYV
Subjt:  VTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV

A0A6J1DM55 uncharacterized protein LOC1110222671.7e-4476.38Show/hide
Query:  DNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV
        + E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS NP+TP  VITREEFDQL+ + DAQVEALKA CE+KE   +DGDLGE PFT D+
Subjt:  DNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKPYDGSKDPKDYV
        LEAPI PKFK PT+KPYDGSK+PKDYV
Subjt:  LEAPIPPKFKAPTVKPYDGSKDPKDYV

A0A6J1DPN4 uncharacterized protein LOC1110230603.6e-5061.88Show/hide
Query:  MEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRT+MR+MEEMYNKM+ +AGA SR  ++V    + EQ   H  PV+EEH             GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  RNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV
         NP+ P GVITREEF+QL+ + DAQVEALK +CE+KE   +DGDLGESPFTSD+LEA IPPKFK PT+K YDGSKDPKDYV
Subjt:  RNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV

A0A6J1DZJ1 uncharacterized protein LOC1110257382.0e-6159.91Show/hide
Query:  RGRHESPPVLPPAHPPRTSKATRGRGGTSKKGARGPAPAPTSENLDALQREMEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVE
        R    + P L PAH P+  KA RGRGG S++   G APAP+ EN DALQ+EMEAMRT+M +MEEMYN+M+   GAGSR E+R  R               
Subjt:  RGRHESPPVLPPAHPPRTSKATRGRGGTSKKGARGPAPAPTSENLDALQREMEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGIREQRGSHLGPVE

Query:  EEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESP
                      +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS NPV P GVITREEFDQL+ + DAQVE LKA+CE K    +DGDLGESP
Subjt:  EEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESP

Query:  FTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV
        FTSD+LEA IP KFK PT+KPYDGSKDPKDYV
Subjt:  FTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGATCTACCGGGAAGCTAGGTGGGGGCCGAGGTCGGCACGAATCACCGCCTGTTCTACCACCTGCGCACCC
CCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAA
TGGAGGCAATGCGCACGAAAATGCGGTCCATGGAGGAAATGTATAACAAAATGATATTAGTTGCAGGCGCAGGGTCCCGATTTGAGAACCGAGTGACGCGCGTTGGCATA
CGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAG
AAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCGCAACCCAGTAACTCCTGCAGGAGTGATTA
CAAGGGAGGAGTTCGACCAGCTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAACGATGGCGACTTGGGAGAA
TCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAACCTTATGATGGGTCGAAGGACCCCAAGGATTATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGATCTACCGGGAAGCTAGGTGGGGGCCGAGGTCGGCACGAATCACCGCCTGTTCTACCACCTGCGCACCC
CCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAA
TGGAGGCAATGCGCACGAAAATGCGGTCCATGGAGGAAATGTATAACAAAATGATATTAGTTGCAGGCGCAGGGTCCCGATTTGAGAACCGAGTGACGCGCGTTGGCATA
CGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAG
AAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCGCAACCCAGTAACTCCTGCAGGAGTGATTA
CAAGGGAGGAGTTCGACCAGCTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAACGATGGCGACTTGGGAGAA
TCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAACCTTATGATGGGTCGAAGGACCCCAAGGATTATGTTTAG
Protein sequenceShow/hide protein sequence
MQSMRAEVNLAEVRSTGKLGGGRGRHESPPVLPPAHPPRTSKATRGRGGTSKKGARGPAPAPTSENLDALQREMEAMRTKMRSMEEMYNKMILVAGAGSRFENRVTRVGI
REQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPVTPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGE
SPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYV