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Moc11g15040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g15040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:11229559..11229783
RNA-Seq ExpressionMoc11g15040
SyntenyMoc11g15040
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ00937.1 hypothetical protein Acr_14g0005720 [Actinidia rufa]2.2e-1857.69Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKI-----QSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYY
        +A++YN RVR RSF  G LVLRK+     + + G L P+WEGP++V  + RPGTY L DLEG+ L+HPWNAEHLK+YY
Subjt:  MARHYNARVRPRSFQVGHLVLRKI-----QSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYY

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]2.7e-2189.09Show/hide
Query:  VLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP
        V +KIQSHVGTLDPSWEGPFEVK I+R GTYMLADLEG VLAHPWNAEHLKRYYP
Subjt:  VLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]1.9e-2279.37Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHP
        MARHYN+RVR RSFQ+G+LVLRK+Q HV  L+PSWEGPFEVK IVRPGTYMLADLEG++L+HP
Subjt:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]8.8e-2060.27Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYY
        MAR+YNARV+ R+F+   LVL+K+  HVG L+P+WEGP+ V  I+RP  Y+L+DL GR L HPWNAEHL+ YY
Subjt:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]4.2e-3086.49Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP
        MARHYN R++PRSFQVGHLV  KIQSHVGTLDPSWE  FEVK IVRPGTYMLADLE  VLAHPWNAEHLKRYYP
Subjt:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A2N9FYD5 Ribonuclease H5.6e-2058.23Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKI-----QSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP
        MARHYN+RV+PR   +G LVLRK+         G L P+WEGP++V  + RPGTY L D+ GR L+HPWNAEHL+RYYP
Subjt:  MARHYNARVRPRSFQVGHLVLRKI-----QSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP

A0A6J1CSJ1 Ribonuclease H1.3e-2189.09Show/hide
Query:  VLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP
        V +KIQSHVGTLDPSWEGPFEVK I+R GTYMLADLEG VLAHPWNAEHLKRYYP
Subjt:  VLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like9.2e-2379.37Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHP
        MARHYN+RVR RSFQ+G+LVLRK+Q HV  L+PSWEGPFEVK IVRPGTYMLADLEG++L+HP
Subjt:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHP

A0A6J1DWM2 Ribonuclease H4.3e-2060.27Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYY
        MAR+YNARV+ R+F+   LVL+K+  HVG L+P+WEGP+ V  I+RP  Y+L+DL GR L HPWNAEHL+ YY
Subjt:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254482.0e-3086.49Show/hide
Query:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP
        MARHYN R++PRSFQVGHLV  KIQSHVGTLDPSWE  FEVK IVRPGTYMLADLE  VLAHPWNAEHLKRYYP
Subjt:  MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTGGTCTTAAGGAAAATTCAGAGTCATGTGGGCACCCTTGACCCAAGTTGG
GAGGGACCGTTCGAGGTTAAAAGCATAGTCCGGCCCGGAACGTATATGCTGGCCGATCTGGAAGGAAGAGTGCTTGCGCATCCGTGGAACGCGGAGCACTTGAAG
CGCTATTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTGGTCTTAAGGAAAATTCAGAGTCATGTGGGCACCCTTGACCCAAGTTGG
GAGGGACCGTTCGAGGTTAAAAGCATAGTCCGGCCCGGAACGTATATGCTGGCCGATCTGGAAGGAAGAGTGCTTGCGCATCCGTGGAACGCGGAGCACTTGAAG
CGCTATTACCCTTGA
Protein sequenceShow/hide protein sequence
MARHYNARVRPRSFQVGHLVLRKIQSHVGTLDPSWEGPFEVKSIVRPGTYMLADLEGRVLAHPWNAEHLKRYYP