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Moc11g15090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g15090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:11266667..11268194
RNA-Seq ExpressionMoc11g15090
SyntenyMoc11g15090
Gene Ontology termsGO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0051716 - cellular response to stimulus (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8732531.1 Histidine kinase 5 [Hibiscus syriacus]3.3e-1130.29Show/hide
Query:  AKKSGFEGIMKLDGANFKYWKMHIKDYLTCKKLNKALK-ERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN------------
        A   G   I K DGA+F +WKM I+D+L  K L + L  ++P GMKDEDW   + QA+  IRL LS NVA  +A E T   LM AL +            
Subjt:  AKKSGFEGIMKLDGANFKYWKMHIKDYLTCKKLNKALK-ERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN------------

Query:  --RKGSDSTFVQGSALA----------VEKGKEKVASDD----------------------------------RQQKHSRRDWKRDVECFHCHKKGHIKK
          R+  +    +G+++A           +    ++  DD                                  + Q    R  K+D  C++C KKGH K+
Subjt:  --RKGSDSTFVQGSALA----------VEKGKEKVASDD----------------------------------RQQKHSRRDWKRDVECFHCHKKGHIKK

Query:  NCRILKED
        +CR LK+D
Subjt:  NCRILKED

KYP39959.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.5e-1151.25Show/hide
Query:  IMKLDGANFKYWKMHIKDYLTCKKLNKALK-ERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN
        I K DG NF +WKM I+DYL  KKL++ L+ ++P GMKD++WV  + QA+  IRL LS NVA  +A E T + LM AL +
Subjt:  IMKLDGANFKYWKMHIKDYLTCKKLNKALK-ERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN

RVW30183.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.9e-1128.05Show/hide
Query:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALE--------------------
        GI K DG +F YW+M I+DYL  +KL+   L  +P  MK E+W   + Q +  IRL LS +VA  V  E T  DLMKAL                     
Subjt:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALE--------------------

Query:  ----NRKGSDSTFVQGSALAVE-----------KGKEKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESNAV---VDDTLVFV
             R+ +  T   GSAL +E           +G+    + +R +  SR    + V+C++C K GH K+ C+  K+  K     +NAV   V D L+  
Subjt:  ----NRKGSDSTFVQGSALAVE-----------KGKEKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESNAV---VDDTLVFV

Query:  ESNTEIGNQSSEWSEFSGNQWKLTK-------------GSKLVAIGHRKSMVYTSQLSVAKGSLKQWIRIGELMKSRQRTVVSEKMNSVGAEVKNGVSIL
             + +   +W   SG  +  T              G   +A G    +V    + ++  +   W+    L K R    +   + SVG     G +IL
Subjt:  ESNTEIGNQSSEWSEFSGNQWKLTK-------------GSKLVAIGHRKSMVYTSQLSVAKGSLKQWIRIGELMKSRQRTVVSEKMNSVGAEVKNGVSIL

Query:  AVG
         VG
Subjt:  AVG

TKS02451.1 hypothetical protein D5086_0000163350 [Populus alba]3.3e-1126.75Show/hide
Query:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALE--------------------
        GI K DG +F YWKM I+DYL  KKL+   L  +P  M+ E+W   + Q +  IRL LS  VA  V  E +   LM+AL                     
Subjt:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALE--------------------

Query:  ---------------------NRKGSDSTFVQGSALAV-------EKGKEKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESN
                              RK S  +   GSAL +       ++G  +  S  R +  S+   ++ VEC++C K GH  +NC   K+        + 
Subjt:  ---------------------NRKGSDSTFVQGSALAV-------EKGKEKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESN

Query:  AVVDDTLVFVESNTEIGNQSSEWSEFSGNQWKLTKGSKLVA--IGHRKSMVYTSQLSVAKGSLKQWIRIGE------------LMKSRQRTVVSEKMNSV
          V D L+       + +Q  EW   SG  +  T  ++++   +G    +VY     +A G+  + + IG+            L   R    + +K+ SV
Subjt:  AVVDDTLVFVESNTEIGNQSSEWSEFSGNQWKLTKGSKLVA--IGHRKSMVYTSQLSVAKGSLKQWIRIGE------------LMKSRQRTVVSEKMNSV

Query:  GAEVKNGVSILAVG
        G    +G SIL  G
Subjt:  GAEVKNGVSILAVG

XP_024021224.1 uncharacterized protein LOC112091537 [Morus notabilis]3.3e-1150Show/hide
Query:  GIMKLDGANFKYWKMHIKDYLTCKKLNKALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN
        GI K DG +F YWKM ++DYL  KKL+  L E+P GMKDE+W   + Q +  IRL L+ NVA  VA E TA  L+  L +
Subjt:  GIMKLDGANFKYWKMHIKDYLTCKKLNKALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN

TrEMBL top hitse value%identityAlignment
A0A151RBV2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1151.25Show/hide
Query:  IMKLDGANFKYWKMHIKDYLTCKKLNKALK-ERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN
        I K DG NF +WKM I+DYL  KKL++ L+ ++P GMKD++WV  + QA+  IRL LS NVA  +A E T + LM AL +
Subjt:  IMKLDGANFKYWKMHIKDYLTCKKLNKALK-ERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALEN

A0A2N9FSS1 Uncharacterized protein5.0e-1332.07Show/hide
Query:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKAL---------------------
        GI K DG +F YW+M I+DYL  KKL+   L E+P  M+D +W   + Q +  IRL LS  VA  V  E T  +LM AL                     
Subjt:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKAL---------------------

Query:  --------ENRKGSDSTFVQGSALAVE-KGKEKVASDDRQQKHSRRDWK-----RDVECFHCHKKGHIKKNCRILKE----DLKRYMTESNAVVDDTLVF
                  R+ +  T   GSAL +E +G+ K  + +R +  SR+        R +EC++C K GHI+KNC  LK+    D    +TE   V D  L+ 
Subjt:  --------ENRKGSDSTFVQGSALAVE-KGKEKVASDDRQQKHSRRDWK-----RDVECFHCHKKGHIKKNCRILKE----DLKRYMTESNAVVDDTLVF

Query:  VESNTEIGNQSSEWSEFSGNQWKLTKGSKLVAIGHRK
        V+S  E               W L  G+      HR+
Subjt:  VESNTEIGNQSSEWSEFSGNQWKLTKGSKLVAIGHRK

A0A2N9GR56 Uncharacterized protein1.2e-1433.33Show/hide
Query:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKAL-------ENRKGSDSTFVQG-
        GI K DG NF+YWKM I+DYL  KKL+   L  +P  M+D  W   + Q +  IRL LS +V   V  ETT + LM+ L        N+ GS+   VQ  
Subjt:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKAL-------ENRKGSDSTFVQG-

Query:  -------------------SALAVE-KGKEK-------VASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDL-----KRYMTE--SNAVVDDT
                            AL ++ +GK K          +D  +   R  +K   ECFH  KKGHI+ NCR  K++      +++  E  + AVVDD 
Subjt:  -------------------SALAVE-KGKEK-------VASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDL-----KRYMTE--SNAVVDDT

Query:  LVFV-----ESNTEIGNQSSEW
         V V     +    + N   EW
Subjt:  LVFV-----ESNTEIGNQSSEW

A0A2N9JC56 Uncharacterized protein1.2e-1433.33Show/hide
Query:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKAL-------ENRKGSDSTFVQG-
        GI K DG NF+YWKM I+DYL  KKL+   L  +P  M+D  W   + Q +  IRL LS +V   V  ETT + LM+ L        N+ GS+   VQ  
Subjt:  GIMKLDGANFKYWKMHIKDYLTCKKLN-KALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKAL-------ENRKGSDSTFVQG-

Query:  -------------------SALAVE-KGKEK-------VASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDL-----KRYMTE--SNAVVDDT
                            AL ++ +GK K          +D  +   R  +K   ECFH  KKGHI+ NCR  K++      +++  E  + AVVDD 
Subjt:  -------------------SALAVE-KGKEK-------VASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDL-----KRYMTE--SNAVVDDT

Query:  LVFV-----ESNTEIGNQSSEW
         V V     +    + N   EW
Subjt:  LVFV-----ESNTEIGNQSSEW

A0A803LTX3 Uncharacterized protein1.2e-1134.32Show/hide
Query:  IMKLDGANFKYWKMHIKDYLTCKKLNKALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALENRKGSDSTFVQ-GSALAVEKGK
        I K DG +F +WKM I+DYL  K L   L  +P+GMK+E+W   + QA+  IRL L+ +VA  V + T  + ++KAL N     S   + G     +KG 
Subjt:  IMKLDGANFKYWKMHIKDYLTCKKLNKALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALENRKGSDSTFVQ-GSALAVEKGK

Query:  EKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESNAVVDDTLVFVESNTEIGN
        ++  S  R +  S+   K ++ C+ C  KGH K+ C   K+  K      N     + V + S+ EIG+
Subjt:  EKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESNAVVDDTLVFVESNTEIGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAGCAAAGAAGTCAGGTTTTGAAGGAATCATGAAGTTAGATGGGGCCAATTTCAAATATTGGAAGATGCATATTAAAGATTATTTGACTTGCAAGAAG
TTGAATAAAGCTTTAAAGGAACGACCAGCAGGGATGAAAGATGAAGATTGGGTGGAGACGAATGAACAGGCAATTGCCTTTATCAGATTGTGTTTGTCGATGAAT
GTGGCAAGTCTCGTAGCAAATGAAACAACAGCAATAGATCTGATGAAAGCACTGGAGAATAGAAAGGGGAGTGACTCTACTTTCGTACAAGGCTCAGCATTGGCT
GTCGAAAAAGGTAAAGAGAAGGTTGCATCTGATGACAGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGTTGAATGTTTTCACTGCCACAAAAAAGGC
CACATCAAGAAAAACTGTAGAATATTAAAAGAGGATCTGAAAAGGTATATGACAGAGTCAAATGCAGTTGTAGACGATACCCTCGTCTTTGTTGAAAGCAACACA
GAAATAGGAAACCAGTCATCGGAGTGGAGTGAGTTTAGTGGGAACCAGTGGAAGCTCACCAAAGGATCCAAGTTGGTGGCAATTGGCCATAGAAAATCTATGGTT
TACACATCGCAATTGAGTGTTGCCAAAGGATCATTGAAACAATGGATACGAATTGGTGAATTGATGAAGTCACGTCAGCGAACAGTTGTATCAGAGAAAATGAAC
TCAGTAGGTGCTGAGGTAAAGAATGGAGTTTCAATTCTGGCAGTAGGCTTGAATACAGCTATCAAGTCATCGGTGGGAAGTTCTTTCTTCAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATCAGCAAAGAAGTCAGGTTTTGAAGGAATCATGAAGTTAGATGGGGCCAATTTCAAATATTGGAAGATGCATATTAAAGATTATTTGACTTGCAAGAAG
TTGAATAAAGCTTTAAAGGAACGACCAGCAGGGATGAAAGATGAAGATTGGGTGGAGACGAATGAACAGGCAATTGCCTTTATCAGATTGTGTTTGTCGATGAAT
GTGGCAAGTCTCGTAGCAAATGAAACAACAGCAATAGATCTGATGAAAGCACTGGAGAATAGAAAGGGGAGTGACTCTACTTTCGTACAAGGCTCAGCATTGGCT
GTCGAAAAAGGTAAAGAGAAGGTTGCATCTGATGACAGGCAGCAGAAGCATAGTAGGAGGGATTGGAAGAGAGATGTTGAATGTTTTCACTGCCACAAAAAAGGC
CACATCAAGAAAAACTGTAGAATATTAAAAGAGGATCTGAAAAGGTATATGACAGAGTCAAATGCAGTTGTAGACGATACCCTCGTCTTTGTTGAAAGCAACACA
GAAATAGGAAACCAGTCATCGGAGTGGAGTGAGTTTAGTGGGAACCAGTGGAAGCTCACCAAAGGATCCAAGTTGGTGGCAATTGGCCATAGAAAATCTATGGTT
TACACATCGCAATTGAGTGTTGCCAAAGGATCATTGAAACAATGGATACGAATTGGTGAATTGATGAAGTCACGTCAGCGAACAGTTGTATCAGAGAAAATGAAC
TCAGTAGGTGCTGAGGTAAAGAATGGAGTTTCAATTCTGGCAGTAGGCTTGAATACAGCTATCAAGTCATCGGTGGGAAGTTCTTTCTTCAAGAATTAG
Protein sequenceShow/hide protein sequence
MGSAKKSGFEGIMKLDGANFKYWKMHIKDYLTCKKLNKALKERPAGMKDEDWVETNEQAIAFIRLCLSMNVASLVANETTAIDLMKALENRKGSDSTFVQGSALA
VEKGKEKVASDDRQQKHSRRDWKRDVECFHCHKKGHIKKNCRILKEDLKRYMTESNAVVDDTLVFVESNTEIGNQSSEWSEFSGNQWKLTKGSKLVAIGHRKSMV
YTSQLSVAKGSLKQWIRIGELMKSRQRTVVSEKMNSVGAEVKNGVSILAVGLNTAIKSSVGSSFFKN