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Moc11g15460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g15460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:11662572..11663135
RNA-Seq ExpressionMoc11g15460
SyntenyMoc11g15460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150385.1 uncharacterized protein LOC111018561 [Momordica charantia]2.0e-0562.96Show/hide
Query:  RDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE
        RD D R  + D+K++ASR P  SPS  +++SNSDLKAQSKY PLT EAVIT+EE
Subjt:  RDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]1.6e-1854.13Show/hide
Query:  MEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLT
        ME+MY E TRANR  S S  PG       GE   P +   D EPI ++ G+DY LRD+D+RKHL +KK++ASR P  S S  +K+SNS+LKAQSKY PL 
Subjt:  MEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLT

Query:  SEAVITKEE
         EA+IT+EE
Subjt:  SEAVITKEE

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.2e-1257.5Show/hide
Query:  GEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE
        GE   P +   + EPI ++ GVDY LRD+DLRKHL DKK+KAS  P  S S  +++SNS+LKAQSKY PL  EAVI +EE
Subjt:  GEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]7.0e-1144.86Show/hide
Query:  MTEEHARTGQEVEPPRRATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRD
        +TEE  + GQEV+PPRR+T  A+          L   H R            +ANR     +  G DDLPE G+D  PP+H DD+EP  +N G+DY LRD
Subjt:  MTEEHARTGQEVEPPRRATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRD

Query:  HDLRKHL
        HDLRKHL
Subjt:  HDLRKHL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]8.8e-0635.56Show/hide
Query:  ATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRG
        A PA   E    LQ+E++ M +++ TMEEMYNEM +A   GS S+     D  E G+                       LRDH      + +KR +S  
Subjt:  ATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRG

Query:  PGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE
         G SPSC   + NS+ +A+S Y P+  E VIT+EE
Subjt:  PGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE

TrEMBL top hitse value%identityAlignment
A0A6J1D8C0 uncharacterized protein LOC1110185619.5e-0662.96Show/hide
Query:  RDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE
        RD D R  + D+K++ASR P  SPS  +++SNSDLKAQSKY PLT EAVIT+EE
Subjt:  RDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE

A0A6J1DNM4 Ribonuclease H7.5e-1954.13Show/hide
Query:  MEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLT
        ME+MY E TRANR  S S  PG       GE   P +   D EPI ++ G+DY LRD+D+RKHL +KK++ASR P  S S  +K+SNS+LKAQSKY PL 
Subjt:  MEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLT

Query:  SEAVITKEE
         EA+IT+EE
Subjt:  SEAVITKEE

A0A6J1DPC9 uncharacterized protein LOC1110222801.1e-1257.5Show/hide
Query:  GEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE
        GE   P +   + EPI ++ GVDY LRD+DLRKHL DKK+KAS  P  S S  +++SNS+LKAQSKY PL  EAVI +EE
Subjt:  GEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE

A0A6J1DR60 uncharacterized protein LOC1110234883.4e-1144.86Show/hide
Query:  MTEEHARTGQEVEPPRRATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRD
        +TEE  + GQEV+PPRR+T  A+          L   H R            +ANR     +  G DDLPE G+D  PP+H DD+EP  +N G+DY LRD
Subjt:  MTEEHARTGQEVEPPRRATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRD

Query:  HDLRKHL
        HDLRKHL
Subjt:  HDLRKHL

A0A6J1DZJ1 uncharacterized protein LOC1110257384.3e-0635.56Show/hide
Query:  ATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRG
        A PA   E    LQ+E++ M +++ TMEEMYNEM +A   GS S+     D  E G+                       LRDH      + +KR +S  
Subjt:  ATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDKKRKASRG

Query:  PGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE
         G SPSC   + NS+ +A+S Y P+  E VIT+EE
Subjt:  PGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAGAACATGCTAGGACAGGGCAAGAGGTGGAGCCACCTCGGAGGGCCACGCCAGCCGCGGACCCTGAAGTTCTTGCAATCCTCCAGCGGGAATTAGATGACAT
GCACAGTCGAGTGCGCACCATGGAGGAGATGTATAATGAGATGACGCGGGCGAACCGAATTGGATCTCATTCAAAAGTTCCAGGCGGAGATGACCTACCCGAGGGAGGGG
AAGATCAACATCCACCCCTCCATCACGACGATCACGAGCCCATCGCTGATAATGTGGGAGTTGACTATATCCTGAGAGATCATGATCTCAGGAAGCACCTCATCGACAAG
AAGAGGAAGGCCTCACGAGGCCCAGGGATCTCCCCATCGTGCTTCAAAAAATACTCAAACTCCGACCTCAAAGCCCAGTCGAAGTATACTCCGTTGACGTCGGAGGCCGT
CATAACGAAGGAGGAGTCGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAGAACATGCTAGGACAGGGCAAGAGGTGGAGCCACCTCGGAGGGCCACGCCAGCCGCGGACCCTGAAGTTCTTGCAATCCTCCAGCGGGAATTAGATGACAT
GCACAGTCGAGTGCGCACCATGGAGGAGATGTATAATGAGATGACGCGGGCGAACCGAATTGGATCTCATTCAAAAGTTCCAGGCGGAGATGACCTACCCGAGGGAGGGG
AAGATCAACATCCACCCCTCCATCACGACGATCACGAGCCCATCGCTGATAATGTGGGAGTTGACTATATCCTGAGAGATCATGATCTCAGGAAGCACCTCATCGACAAG
AAGAGGAAGGCCTCACGAGGCCCAGGGATCTCCCCATCGTGCTTCAAAAAATACTCAAACTCCGACCTCAAAGCCCAGTCGAAGTATACTCCGTTGACGTCGGAGGCCGT
CATAACGAAGGAGGAGTCGACCTAA
Protein sequenceShow/hide protein sequence
MTEEHARTGQEVEPPRRATPAADPEVLAILQRELDDMHSRVRTMEEMYNEMTRANRIGSHSKVPGGDDLPEGGEDQHPPLHHDDHEPIADNVGVDYILRDHDLRKHLIDK
KRKASRGPGISPSCFKKYSNSDLKAQSKYTPLTSEAVITKEEST