; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g15500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g15500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:11704605..11706211
RNA-Seq ExpressionMoc11g15500
SyntenyMoc11g15500
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151473.1 uncharacterized protein LOC111019405 [Momordica charantia]2.8e-17363.55Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        MKGQ LADFLAN PVPSDWKLCEDLPDEEVFYVE+KEPWTMYFDGA RRN  G GVVFVSP+KHMLPYSFTLGELC NN  EY+  IIGLQI IEIGITY
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEI  DSKLIINQLLLEYDVKHEDLKPYFVYARRLL+RFDGVTL+HVPRSENKK DALANL  A  +                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YLQHGKLP+D RHKTEIRRRAARFIYYKDTLYRRSFEG+FL+CLGKEESAKALEEAHSGV  A+QSGPKL+F+LK+MGYYWP MVQDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAKK----------------------------------------------------------------------------------------------
        MEYAKK                                                                                              
Subjt:  MEYAKK----------------------------------------------------------------------------------------------

Query:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
           QF NSLMDKLCEKFSFKQYKSSMYN  AN LAEAFNKTLCNLLKKV+SKTKRDW++KIGEVLWAYRTT RT T  T YSLVY VEAILPLEREI SL
Subjt:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M VLEGLTTEDNAKL LQELEALDEKRLD QQTL
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

XP_022156952.1 uncharacterized protein K02A2.6-like [Momordica charantia]1.6e-16060.93Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        MKGQALADFLAN PVPSDWKLCEDLPDEEVFYVE+K PWT+                            FTLGELCSNN AEY+  IIGLQI IEIGITY
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEIY DSKLIINQLLLEYDVKHEDL+PYFVYARRLL+RFDGVTL+HVPRSENKK DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YLQHGKLP+DLRHKTEIRRRAARFIYYKD LYRRSFEGLFL+CLGKEESAKALEEAHSGV GAHQSGPKLH  LK+MGYYWP MVQDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAKK----------------------------------------------------------------------------------------------
        MEYAKK                                                                                              
Subjt:  MEYAKK----------------------------------------------------------------------------------------------

Query:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
           QF NSLMDKLCEKFSFKQYKSSMYN  AN LAEAFNKTLCNLL+KV+SKTKRDW+EKIGEVLW YRTTHRT  GAT YSLVY VEAILPLEREI SL
Subjt:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +MTVLEGLTTEDNAKL LQELEALDEKRLD QQTL
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]8.0e-16056.82Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        +KGQALADFLA+ P+PSDWKLC+DLPD+EVF+ E+ EPWTMYFDGAARR+ AGAG+V +SP+KHMLPYSF L ELCSNNVAEY+  IIGLQI +EIG+++
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IE+Y DSKLIINQL L+YDVKHEDLKPYF YAR+L+++FD V L+HVPR ENK+ DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YL+HGKLP D RHK EIRRRAA FIYYK TLYRRS EGLFL+CLGKE+S KAL+E H+GV GAHQSGPKL FQL++MGYYWP M+QDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAK-----------------------------------------------------------------------------------------------
        ++Y K                                                                                               
Subjt:  MEYAK-----------------------------------------------------------------------------------------------

Query:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
          KQF NS+MDKLCEKF FKQYKSSMYN  AN LAEAFNKTLCNLLKK++SK+KRDW+EKIGE LWAYRTTHRT TG T YSLVY VEA+LPLEREI SL
Subjt:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M V EGLTTEDN KL LQELEALDEKRL+ QQ L
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]8.0e-16056.82Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        +KGQALADFLA+ P+PSDWKLC+DLPD+EVF+ E+ EPWTMYFDGAARR+ AGAG+V +SP+KHMLPYSF L ELCSNNVAEY+  IIGLQI +EIG+++
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IE+Y DSKLIINQL L+YDVKHEDLKPYF YAR+L+++FD V L+HVPR ENK+ DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YL+HGKLP D RHK EIRRRAA FIYYK TLYRRS EGLFL+CLGKE+S KAL+E H+GV GAHQSGPKL FQL++MGYYWP M+QDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAK-----------------------------------------------------------------------------------------------
        ++Y K                                                                                               
Subjt:  MEYAK-----------------------------------------------------------------------------------------------

Query:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
          KQF NS+MDKLCEKF FKQYKSSMYN  AN LAEAFNKTLCNLLKK++SK+KRDW+EKIGE LWAYRTTHRT TG T YSLVY VEA+LPLEREI SL
Subjt:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M V EGLTTEDN KL LQELEALDEKRL+ QQ L
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]8.0e-16056.82Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        +KGQALADFLA+ P+PSDWKLC+DLPD+EVF+ E+ EPWTMYFDGAARR+ AGAG+V +SP+KHMLPYSF L ELCSNNVAEY+  IIGLQI +EIG+++
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IE+Y DSKLIINQL L+YDVKHEDLKPYF YAR+L+++FD V L+HVPR ENK+ DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YL+HGKLP D RHK EIRRRAA FIYYK TLYRRS EGLFL+CLGKE+S KAL+E H+GV GAHQSGPKL FQL++MGYYWP M+QDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAK-----------------------------------------------------------------------------------------------
        ++Y K                                                                                               
Subjt:  MEYAK-----------------------------------------------------------------------------------------------

Query:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
          KQF NS+MDKLCEKF FKQYKSSMYN  AN LAEAFNKTLCNLLKK++SK+KRDW+EKIGE LWAYRTTHRT TG T YSLVY VEA+LPLEREI SL
Subjt:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M V EGLTTEDN KL LQELEALDEKRL+ QQ L
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H5.6e-15956.82Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        +KGQALADFLA+ PVPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SP+KHMLPYSFTLGELCSNNVAEY+ FIIGLQ+  E GI  
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEI+ DSKLIINQL  +Y+VKH+DLKPYF YARRL+ RFD + L+H+PRSENKK DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YL+HGKLP D RH+ EIRRRAARFIYYKDTLYRRS+EGL L+CLGKEES KALEEAHSG+ GAHQSGPKL +QLK+MGYYWP M+ DS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAK-----------------------------------------------------------------------------------------------
        M +AK                                                                                               
Subjt:  MEYAK-----------------------------------------------------------------------------------------------

Query:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
          +QF N+LMDKLCEKF+FKQ+KSSMYN  AN LAEAFNKTLC+LLKKV+SKTKRDW+EKIGE LWAYRTTHRT TG T YSLVY VEA+LPLEREI SL
Subjt:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M + EGLTTEDNA+L L+ELEALDEKRL+ QQ L
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

A0A5D3BTY1 Ribonuclease H3.3e-15956.82Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        +KGQALADFLA+ PVPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SP+KHMLPYSFTLGELCSNNVAEY+ FIIGLQ+  E GI  
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEI+ DSKLIINQL  +Y+VKH+DLKPYF YARRL+ RFD + L+H+PRSENKK DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YL+HGKLP D RH+ EIRRRAARFIYYKDTLYRRS+EGL L+CLGKEES KALEEAHSG+ GAHQSGPKL +QLK+MGYYWP M+ DS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAK-----------------------------------------------------------------------------------------------
        M +AK                                                                                               
Subjt:  MEYAK-----------------------------------------------------------------------------------------------

Query:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
          +QF N+LMDKLCEKF+FKQYKSSMYN  AN LAEAFNKTLC+LLKKV+SKTKRDW+EKIGE LWAYRTTHRT TG T YSLVY VEA+LPLE+EI SL
Subjt:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M++ EGLTT+DNA+L LQELEALDEKRL+ QQ L
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

A0A5D3D1E5 Ribonuclease H2.5e-15957.01Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        +KGQALADFLA+ PVPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SP+KHMLPYSFTLGELCSNNVAEY+ FIIGLQ+  E GI  
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEI+ DSKLIINQL  +Y+VKH+DLKPYF YARRL+ RFD + L+H+PRSENKK DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YL+HGKLP D RH+ EIRRRAARFIYYKDTLYRRS+EGL L+CLGKEES KALEEAHSG+ GAHQSGPKL +QLK+MGYYWP M+ DS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAK-----------------------------------------------------------------------------------------------
        M +AK                                                                                               
Subjt:  MEYAK-----------------------------------------------------------------------------------------------

Query:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
          +QF N+LMDKLCEKF+FKQ+KSSMYN  AN LAEAFNKTLC+LLKKV+SKTKRDW+EKIGE LWAYRTTHRT TG T YSLVY VEA+LPLEREI SL
Subjt:  --KQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M + EGLTTEDNA+L LQELEALDEKRL+ QQ L
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

A0A6J1DC95 Ribonuclease H1.4e-17363.55Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        MKGQ LADFLAN PVPSDWKLCEDLPDEEVFYVE+KEPWTMYFDGA RRN  G GVVFVSP+KHMLPYSFTLGELC NN  EY+  IIGLQI IEIGITY
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEI  DSKLIINQLLLEYDVKHEDLKPYFVYARRLL+RFDGVTL+HVPRSENKK DALANL  A  +                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YLQHGKLP+D RHKTEIRRRAARFIYYKDTLYRRSFEG+FL+CLGKEESAKALEEAHSGV  A+QSGPKL+F+LK+MGYYWP MVQDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAKK----------------------------------------------------------------------------------------------
        MEYAKK                                                                                              
Subjt:  MEYAKK----------------------------------------------------------------------------------------------

Query:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
           QF NSLMDKLCEKFSFKQYKSSMYN  AN LAEAFNKTLCNLLKKV+SKTKRDW++KIGEVLWAYRTT RT T  T YSLVY VEAILPLEREI SL
Subjt:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +M VLEGLTTEDNAKL LQELEALDEKRLD QQTL
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

A0A6J1DTB2 Ribonuclease H7.8e-16160.93Show/hide
Query:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY
        MKGQALADFLAN PVPSDWKLCEDLPDEEVFYVE+K PWT+                            FTLGELCSNN AEY+  IIGLQI IEIGITY
Subjt:  MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITY

Query:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------
        IEIY DSKLIINQLLLEYDVKHEDL+PYFVYARRLL+RFDGVTL+HVPRSENKK DALANL TALT+                                 
Subjt:  IEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTI---------------------------------

Query:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS
               Q +  YLQHGKLP+DLRHKTEIRRRAARFIYYKD LYRRSFEGLFL+CLGKEESAKALEEAHSGV GAHQSGPKLH  LK+MGYYWP MVQDS
Subjt:  -------QKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEESAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDS

Query:  MEYAKK----------------------------------------------------------------------------------------------
        MEYAKK                                                                                              
Subjt:  MEYAKK----------------------------------------------------------------------------------------------

Query:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL
           QF NSLMDKLCEKFSFKQYKSSMYN  AN LAEAFNKTLCNLL+KV+SKTKRDW+EKIGEVLW YRTTHRT  GAT YSLVY VEAILPLEREI SL
Subjt:  ---QFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWAYRTTHRTSTGATSYSLVYDVEAILPLEREILSL

Query:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL
        +MTVLEGLTTEDNAKL LQELEALDEKRLD QQTL
Subjt:  QMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI5.6e-0732.33Show/hide
Query:  YFDGAARRNRAGA----GVVFVSPKKHMLPYS-----FTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYA
        YFDG       G     G V     + +  Y      F++    +NNVAEY   I  ++ ++ +GI+   I  DS+L+I Q+  EY VK + + P +  A
Subjt:  YFDGAARRNRAGA----GVVFVSPKKHMLPYS-----FTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYA

Query:  RRLLKRFDGVTLDHVPRSENKKTDALANLVTAL
          L K+ +  TL  VPR ENK+ D L+ +   L
Subjt:  RRLLKRFDGVTLDHVPRSENKKTDALANLVTAL

P64956 Uncharacterized protein Mb2253c2.2e-1135.83Show/hide
Query:  DGAARRNRAGAG---VVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFD
        DG +R N   AG   VV+ +    +L  S       +NNVAEY   I GL   +++G T   +  DSKL++ Q+   + VKH DL   +V A+ L  +F 
Subjt:  DGAARRNRAGAG---VVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFD

Query:  GVTLDHVPRSENKKTDALAN
         +  + VPR+ N   D LAN
Subjt:  GVTLDHVPRSENKKTDALAN

P9WLH4 Uncharacterized protein MT22872.2e-1135.83Show/hide
Query:  DGAARRNRAGAG---VVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFD
        DG +R N   AG   VV+ +    +L  S       +NNVAEY   I GL   +++G T   +  DSKL++ Q+   + VKH DL   +V A+ L  +F 
Subjt:  DGAARRNRAGAG---VVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFD

Query:  GVTLDHVPRSENKKTDALAN
         +  + VPR+ N   D LAN
Subjt:  GVTLDHVPRSENKKTDALAN

P9WLH5 Bifunctional protein Rv2228c2.2e-1135.83Show/hide
Query:  DGAARRNRAGAG---VVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFD
        DG +R N   AG   VV+ +    +L  S       +NNVAEY   I GL   +++G T   +  DSKL++ Q+   + VKH DL   +V A+ L  +F 
Subjt:  DGAARRNRAGAG---VVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFD

Query:  GVTLDHVPRSENKKTDALAN
         +  + VPR+ N   D LAN
Subjt:  GVTLDHVPRSENKKTDALAN

Q9HSF6 Ribonuclease HI1.5e-1238.84Show/hide
Query:  YFDGAARRN--RAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRF
        YFDGA+R N   A  G V VS    ++          +NN AEY+  I  L+   + G   IE+  DS+L+  QL   +D    DL+   V AR LL  F
Subjt:  YFDGAARRN--RAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRF

Query:  DGVTLDHVPRSENKKTDALAN
        D  ++ HVPR+ N++ DALAN
Subjt:  DGVTLDHVPRSENKKTDALAN

Arabidopsis top hitse value%identityAlignment
AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.6e-1029.27Show/hide
Query:  TMYFDGAARRN--RAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLK
        T+ FDGA++ N  +AGAG V  +    +L Y        +NNVAEY   ++GL+  ++ G   + +  DS L+  Q+   +   H  +      A+ L+ 
Subjt:  TMYFDGAARRN--RAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLK

Query:  RFDGVTLDHVPRSENKKTDALAN
         F    + H+ R +N + D  AN
Subjt:  RFDGVTLDHVPRSENKKTDALAN

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.6e-1029.27Show/hide
Query:  TMYFDGAARRN--RAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLK
        T+ FDGA++ N  +AGAG V  +    +L Y        +NNVAEY   ++GL+  ++ G   + +  DS L+  Q+   +   H  +      A+ L+ 
Subjt:  TMYFDGAARRN--RAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLK

Query:  RFDGVTLDHVPRSENKKTDALAN
         F    + H+ R +N + D  AN
Subjt:  RFDGVTLDHVPRSENKKTDALAN

AT5G51080.1 RNase H family protein5.1e-1131.1Show/hide
Query:  ALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFV-SPKKHMLPYSFTLG-ELCSNNVAEYETFIIGLQIVIEIGITYIE
        AL   L    +PS     E L + E       E   + FDGA++ N   +G   V   +   L +    G  + +NN AEY   I+GL+  IE G T I+
Subjt:  ALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFV-SPKKHMLPYSFTLG-ELCSNNVAEYETFIIGLQIVIEIGITYIE

Query:  IYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALT
        + +DSKL+  Q+  ++ V HE L      A++L  +     + HV RS N   D  AN+   L+
Subjt:  IYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALT

AT5G51080.2 RNase H family protein5.1e-1131.1Show/hide
Query:  ALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFV-SPKKHMLPYSFTLG-ELCSNNVAEYETFIIGLQIVIEIGITYIE
        AL   L    +PS     E L + E       E   + FDGA++ N   +G   V   +   L +    G  + +NN AEY   I+GL+  IE G T I+
Subjt:  ALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFV-SPKKHMLPYSFTLG-ELCSNNVAEYETFIIGLQIVIEIGITYIE

Query:  IYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALT
        + +DSKL+  Q+  ++ V HE L      A++L  +     + HV RS N   D  AN+   L+
Subjt:  IYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALT

AT5G51080.3 RNase H family protein5.1e-1131.1Show/hide
Query:  ALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFV-SPKKHMLPYSFTLG-ELCSNNVAEYETFIIGLQIVIEIGITYIE
        AL   L    +PS     E L + E       E   + FDGA++ N   +G   V   +   L +    G  + +NN AEY   I+GL+  IE G T I+
Subjt:  ALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFV-SPKKHMLPYSFTLG-ELCSNNVAEYETFIIGLQIVIEIGITYIE

Query:  IYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALT
        + +DSKL+  Q+  ++ V HE L      A++L  +     + HV RS N   D  AN+   L+
Subjt:  IYSDSKLIINQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGCAAGCATTGGCAGACTTCCTAGCTAATCCTCCGGTCCCATCAGATTGGAAATTGTGTGAGGACTTGCCTGATGAAGAAGTATTCTATGTTGAAATAAAGGA
ACCTTGGACCATGTACTTTGATGGTGCAGCACGAAGGAATAGAGCGGGGGCAGGTGTTGTCTTTGTTTCACCTAAGAAACATATGTTACCCTATAGCTTCACACTTGGTG
AATTGTGTTCAAACAACGTTGCTGAATATGAAACGTTCATCATAGGACTTCAAATTGTCATAGAAATCGGAATAACATACATTGAGATCTACAGCGATTCGAAGTTGATA
ATCAACCAACTTCTGTTGGAGTATGATGTGAAGCACGAAGACCTTAAGCCTTATTTCGTTTATGCTAGACGACTACTGAAGAGGTTTGATGGTGTAACACTAGATCATGT
TCCTCGTTCGGAGAACAAAAAGACAGATGCCCTAGCAAATTTGGTTACTGCTCTTACAATTCAGAAGATGGGACATTATCTTCAACATGGAAAGCTTCCGATAGATCTCC
GACATAAGACTGAAATACGTAGAAGAGCTGCTCGATTTATCTACTACAAAGATACTCTTTACCGACGCTCATTTGAAGGCCTATTCCTTCAATGTTTGGGAAAGGAAGAA
TCTGCTAAGGCATTAGAAGAAGCACACTCAGGAGTTTATGGTGCTCACCAATCTGGACCAAAGCTTCATTTCCAATTAAAGAAAATGGGTTATTATTGGCCCATAATGGT
TCAAGATTCTATGGAATATGCGAAGAAACAATTCTTCAATAGTCTGATGGACAAACTATGCGAAAAGTTTAGCTTCAAGCAATATAAATCGTCCATGTATAATACTGTAG
CGAATGTGTTGGCAGAAGCATTCAACAAGACATTATGCAATTTGTTGAAGAAAGTGATCTCCAAGACAAAAAGAGACTGGAAAGAGAAGATCGGTGAAGTGTTATGGGCT
TATCGAACTACTCATCGTACTTCTACAGGAGCTACGTCTTACTCTTTAGTTTATGATGTAGAAGCTATCCTTCCATTGGAAAGAGAAATTCTATCACTACAAATGACCGT
GCTAGAAGGTTTAACCACTGAAGATAATGCAAAATTATGGCTTCAAGAGTTAGAAGCACTTGACGAAAAGAGACTTGATGTGCAACAAACATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGCAAGCATTGGCAGACTTCCTAGCTAATCCTCCGGTCCCATCAGATTGGAAATTGTGTGAGGACTTGCCTGATGAAGAAGTATTCTATGTTGAAATAAAGGA
ACCTTGGACCATGTACTTTGATGGTGCAGCACGAAGGAATAGAGCGGGGGCAGGTGTTGTCTTTGTTTCACCTAAGAAACATATGTTACCCTATAGCTTCACACTTGGTG
AATTGTGTTCAAACAACGTTGCTGAATATGAAACGTTCATCATAGGACTTCAAATTGTCATAGAAATCGGAATAACATACATTGAGATCTACAGCGATTCGAAGTTGATA
ATCAACCAACTTCTGTTGGAGTATGATGTGAAGCACGAAGACCTTAAGCCTTATTTCGTTTATGCTAGACGACTACTGAAGAGGTTTGATGGTGTAACACTAGATCATGT
TCCTCGTTCGGAGAACAAAAAGACAGATGCCCTAGCAAATTTGGTTACTGCTCTTACAATTCAGAAGATGGGACATTATCTTCAACATGGAAAGCTTCCGATAGATCTCC
GACATAAGACTGAAATACGTAGAAGAGCTGCTCGATTTATCTACTACAAAGATACTCTTTACCGACGCTCATTTGAAGGCCTATTCCTTCAATGTTTGGGAAAGGAAGAA
TCTGCTAAGGCATTAGAAGAAGCACACTCAGGAGTTTATGGTGCTCACCAATCTGGACCAAAGCTTCATTTCCAATTAAAGAAAATGGGTTATTATTGGCCCATAATGGT
TCAAGATTCTATGGAATATGCGAAGAAACAATTCTTCAATAGTCTGATGGACAAACTATGCGAAAAGTTTAGCTTCAAGCAATATAAATCGTCCATGTATAATACTGTAG
CGAATGTGTTGGCAGAAGCATTCAACAAGACATTATGCAATTTGTTGAAGAAAGTGATCTCCAAGACAAAAAGAGACTGGAAAGAGAAGATCGGTGAAGTGTTATGGGCT
TATCGAACTACTCATCGTACTTCTACAGGAGCTACGTCTTACTCTTTAGTTTATGATGTAGAAGCTATCCTTCCATTGGAAAGAGAAATTCTATCACTACAAATGACCGT
GCTAGAAGGTTTAACCACTGAAGATAATGCAAAATTATGGCTTCAAGAGTTAGAAGCACTTGACGAAAAGAGACTTGATGTGCAACAAACATTGTAA
Protein sequenceShow/hide protein sequence
MKGQALADFLANPPVPSDWKLCEDLPDEEVFYVEIKEPWTMYFDGAARRNRAGAGVVFVSPKKHMLPYSFTLGELCSNNVAEYETFIIGLQIVIEIGITYIEIYSDSKLI
INQLLLEYDVKHEDLKPYFVYARRLLKRFDGVTLDHVPRSENKKTDALANLVTALTIQKMGHYLQHGKLPIDLRHKTEIRRRAARFIYYKDTLYRRSFEGLFLQCLGKEE
SAKALEEAHSGVYGAHQSGPKLHFQLKKMGYYWPIMVQDSMEYAKKQFFNSLMDKLCEKFSFKQYKSSMYNTVANVLAEAFNKTLCNLLKKVISKTKRDWKEKIGEVLWA
YRTTHRTSTGATSYSLVYDVEAILPLEREILSLQMTVLEGLTTEDNAKLWLQELEALDEKRLDVQQTL