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Moc11g17280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g17280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr11:13268863..13272485
RNA-Seq ExpressionMoc11g17280
SyntenyMoc11g17280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]3.3e-0982.22Show/hide
Query:  SCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV
        SCEKDNLIK+LK+NE N L +LDKAK++IKKLTIGAQRLDKIIEV
Subjt:  SCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV

KAA0053257.1 uncharacterized protein E6C27_scaffold102G00500 [Cucumis melo var. makuwa]8.1e-0839.69Show/hide
Query:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES
        EI      S++  L +S   S KK   ++ + +S+ +S++EE  +    +  D +D         L+    +  +         SCEKDNLIK+LK+NE 
Subjt:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES

Query:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI
        N L +LDKAK++IKKLTIGAQRLDKIIEV +
Subjt:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI

TYK02911.1 uncharacterized protein E5676_scaffold755G00110 [Cucumis melo var. makuwa]1.1e-0739.69Show/hide
Query:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES
        EI      S++  L +S   S KK   ++ + +S+ +S++EE  +    +  D +D         L+    +  +         SCEKDNLIK+LK+NE 
Subjt:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES

Query:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI
        N L +LDKAK++IKKLTIGAQRLDKIIEV +
Subjt:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]2.8e-0892.5Show/hide
Query:  DNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIE
        DNLIKLLKKNES+ALVELDKAKD IK+LTIGAQRLDKIIE
Subjt:  DNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIE

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]5.6e-0982.22Show/hide
Query:  SCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV
        SCEKDNLIK+LK+NE + L ELDKAK++IKKLTIGAQRLDKIIEV
Subjt:  SCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.6e-0982.22Show/hide
Query:  SCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV
        SCEKDNLIK+LK+NE N L +LDKAK++IKKLTIGAQRLDKIIEV
Subjt:  SCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein4.3e-0775Show/hide
Query:  CEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV
        CEKDNLIK+LK+NE N L +LDKAK++IKKLTI AQRL +IIEV
Subjt:  CEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEV

A0A5A7UFI4 Uncharacterized protein3.9e-0839.69Show/hide
Query:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES
        EI      S++  L +S   S KK   ++ + +S+ +S++EE  +    +  D +D         L+    +  +         SCEKDNLIK+LK+NE 
Subjt:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES

Query:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI
        N L +LDKAK++IKKLTIGAQRLDKIIEV +
Subjt:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI

A0A5D3BT46 Uncharacterized protein5.1e-0839.69Show/hide
Query:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES
        EI      S++  L +S   S KK   ++ + +S+ +S++EE  +    +  D +D         L+    +  +         SCEKDNLIK+LK+NE 
Subjt:  EILESDLSSSEITLARSRDSSPKKA-DSVEEFASRLDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNES

Query:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI
        N L +LDKAK++IKKLTIGAQRLDKIIEV +
Subjt:  NALVELDKAKDSIKKLTIGAQRLDKIIEVVI

A0A6J1DS74 uncharacterized protein LOC1110238061.3e-0892.5Show/hide
Query:  DNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIE
        DNLIKLLKKNES+ALVELDKAKD IK+LTIGAQRLDKIIE
Subjt:  DNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTGTCCCCCCACTCTGCCTATAAGGAGCATCATTCCTTCGACTCAGTCTCGAAAACAGAACCGGCATTCGACGCACACTCGAGTACTTCTGACGCTTGG
AATTCTTCCGATCTGAATCGTCCTTTTCTGGACCCGTGTGCGGTCAGGATTAAATTTCAGGATACTATAAATACCCCCAGGGCTTCTCCTTCATTTTTTACGCTT
TCTGAAATTTTGGAGTCCGACCTAAGCAGTTCGGAAATTACTCTAGCTCGAAGTCGGGATTCTTCACCCAAGAAGGCTGATTCTGTAGAGGAGTTTGCGAGTAGG
TTAGACTCCAAACTAGAAGAGGAGATAGACAATTTTAGGTTCTCCAAGGATGATGGAGATGATAGTGACACATCTACCTCGAGCCAAGATTTAGAGTACCCTTCC
CAGATGCCTGAAAACTACCTCGGCCCCCTTTGTAGGAGATATAGTTGTGAAAAAGATAATTTGATTAAATTGCTTAAGAAAAATGAATCAAATGCTTTAGTGGAA
CTTGATAAGGCTAAAGATTCTATTAAAAAATTAACAATAGGTGCTCAAAGGTTGGACAAGATTATTGAAGTAGTGATTCTTTACAAAGAAATTTTGGAGATTTAC
TTGTTAGTGACAAAAGCAAAGAGATTGCTTCAAGTAAGCAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTGTCCCCCCACTCTGCCTATAAGGAGCATCATTCCTTCGACTCAGTCTCGAAAACAGAACCGGCATTCGACGCACACTCGAGTACTTCTGACGCTTGG
AATTCTTCCGATCTGAATCGTCCTTTTCTGGACCCGTGTGCGGTCAGGATTAAATTTCAGGATACTATAAATACCCCCAGGGCTTCTCCTTCATTTTTTACGCTT
TCTGAAATTTTGGAGTCCGACCTAAGCAGTTCGGAAATTACTCTAGCTCGAAGTCGGGATTCTTCACCCAAGAAGGCTGATTCTGTAGAGGAGTTTGCGAGTAGG
TTAGACTCCAAACTAGAAGAGGAGATAGACAATTTTAGGTTCTCCAAGGATGATGGAGATGATAGTGACACATCTACCTCGAGCCAAGATTTAGAGTACCCTTCC
CAGATGCCTGAAAACTACCTCGGCCCCCTTTGTAGGAGATATAGTTGTGAAAAAGATAATTTGATTAAATTGCTTAAGAAAAATGAATCAAATGCTTTAGTGGAA
CTTGATAAGGCTAAAGATTCTATTAAAAAATTAACAATAGGTGCTCAAAGGTTGGACAAGATTATTGAAGTAGTGATTCTTTACAAAGAAATTTTGGAGATTTAC
TTGTTAGTGACAAAAGCAAAGAGATTGCTTCAAGTAAGCAAGAAGTGA
Protein sequenceShow/hide protein sequence
MDLSPHSAYKEHHSFDSVSKTEPAFDAHSSTSDAWNSSDLNRPFLDPCAVRIKFQDTINTPRASPSFFTLSEILESDLSSSEITLARSRDSSPKKADSVEEFASR
LDSKLEEEIDNFRFSKDDGDDSDTSTSSQDLEYPSQMPENYLGPLCRRYSCEKDNLIKLLKKNESNALVELDKAKDSIKKLTIGAQRLDKIIEVVILYKEILEIY
LLVTKAKRLLQVSKK