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Moc11g17460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g17460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:13418448..13425477
RNA-Seq ExpressionMoc11g17460
SyntenyMoc11g17460
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU39928.1 hypothetical protein TSUD_275280 [Trifolium subterraneum]1.3e-0845.45Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGE
        MG+++E+++F G  DF LWK+K+ AIL QQK D A   +  + A ++ EE  EM+K A+S++IL LS+ VLR++  E
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGE

TXG48538.1 hypothetical protein EZV62_024413 [Acer yangbiense]1.4e-0741.03Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGED
        +  +F++++F+GKGDF +W+ K+ AIL QQK   A   +KD+   ++ EE +++ + AYS +IL+L+++VLRQ+  ED
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGED

XP_016899859.1 PREDICTED: uncharacterized protein LOC107990692 [Cucumis melo]2.4e-0744.16Show/hide
Query:  ARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDK
        AR+++++FDGKGDF+LWK KI AI+ QQK   A  + + +   +  E+ + ME  AYS ++L+LS+SVLR++   D+
Subjt:  ARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDK

XP_022157854.1 uncharacterized protein LOC111024471 isoform X1 [Momordica charantia]4.5e-0934.35Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRNVESATQATLTHIK
        M A+FE++ FDGKGDFSLWK K+ A+L QQK+  A  +   +    T EE+ E++++A+S +ILHL+++VLR++     +R       +    +   +  
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRNVESATQATLTHIK

Query:  QAGVHNSLRIEIEVRVKDLLVTVRKNDSFGG
        +   H S     EVR  D++ T  +    GG
Subjt:  QAGVHNSLRIEIEVRVKDLLVTVRKNDSFGG

XP_022157856.1 uncharacterized protein LOC111024471 isoform X3 [Momordica charantia]3.4e-0943.68Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRN
        M A+FE++ FDGKGDFSLWK K+ A+L QQK+  A  +   +    T EE+ E++++A+S +ILHL+++VLR++     +R  N  N
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRN

TrEMBL top hitse value%identityAlignment
A0A1S4DV47 uncharacterized protein LOC1079906921.2e-0744.16Show/hide
Query:  ARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDK
        AR+++++FDGKGDF+LWK KI AI+ QQK   A  + + +   +  E+ + ME  AYS ++L+LS+SVLR++   D+
Subjt:  ARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDK

A0A2Z6N4T4 CCHC-type domain-containing protein6.3e-0945.45Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGE
        MG+++E+++F G  DF LWK+K+ AIL QQK D A   +  + A ++ EE  EM+K A+S++IL LS+ VLR++  E
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGE

A0A5C7GV29 Uncharacterized protein6.9e-0841.03Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGED
        +  +F++++F+GKGDF +W+ K+ AIL QQK   A   +KD+   ++ EE +++ + AYS +IL+L+++VLRQ+  ED
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGED

A0A6J1DXR5 uncharacterized protein LOC111024471 isoform X12.2e-0934.35Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRNVESATQATLTHIK
        M A+FE++ FDGKGDFSLWK K+ A+L QQK+  A  +   +    T EE+ E++++A+S +ILHL+++VLR++     +R       +    +   +  
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRNVESATQATLTHIK

Query:  QAGVHNSLRIEIEVRVKDLLVTVRKNDSFGG
        +   H S     EVR  D++ T  +    GG
Subjt:  QAGVHNSLRIEIEVRVKDLLVTVRKNDSFGG

A0A6J1DZD8 uncharacterized protein LOC111024471 isoform X31.7e-0943.68Show/hide
Query:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRN
        M A+FE++ FDGKGDFSLWK K+ A+L QQK+  A  +   +    T EE+ E++++A+S +ILHL+++VLR++     +R  N  N
Subjt:  MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGCGCGCTTTGAGGTGCAACAATTTGATGGCAAGGGAGACTTCAGTCTTTGGAAAATAAAGATAATGGCGATCTTGAGACAGCAGAAGTTGGACTTTGCT
TTCATGAACAAGAAGGATGTCCTTGCTAGAGTAACTCTCGAGGAACTAAAAGAGATGGAGAAACTTGCCTATAGCTTGTTGATTCTTCACCTATCGAATAGTGTT
CTTCGACAAATGAGAGGTGAGGATAAGTCTCGTCCCCAAAATGGTAGGAATGTTGAGTCGGCGACTCAGGCCACTCTCACCCATATAAAACAGGCAGGAGTCCAT
AACTCACTTAGGATTGAGATCGAGGTAAGGGTGAAAGATTTGCTTGTCACTGTGAGAAAGAATGACTCCTTTGGTGGACTCGAACCTACGCCAGAGAGACGATGG
TGCCGCACGCTGATTGGGTCAAGTGGGCTTGGCCACCGAAAGAGCGACCGACGTTATCCCCTGAAGAGTATCTTTCGAGATAAAGGTTTTGAGTCGCCACCAACC
ATCTACAAGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGCGCGCTTTGAGGTGCAACAATTTGATGGCAAGGGAGACTTCAGTCTTTGGAAAATAAAGATAATGGCGATCTTGAGACAGCAGAAGTTGGACTTTGCT
TTCATGAACAAGAAGGATGTCCTTGCTAGAGTAACTCTCGAGGAACTAAAAGAGATGGAGAAACTTGCCTATAGCTTGTTGATTCTTCACCTATCGAATAGTGTT
CTTCGACAAATGAGAGGTGAGGATAAGTCTCGTCCCCAAAATGGTAGGAATGTTGAGTCGGCGACTCAGGCCACTCTCACCCATATAAAACAGGCAGGAGTCCAT
AACTCACTTAGGATTGAGATCGAGGTAAGGGTGAAAGATTTGCTTGTCACTGTGAGAAAGAATGACTCCTTTGGTGGACTCGAACCTACGCCAGAGAGACGATGG
TGCCGCACGCTGATTGGGTCAAGTGGGCTTGGCCACCGAAAGAGCGACCGACGTTATCCCCTGAAGAGTATCTTTCGAGATAAAGGTTTTGAGTCGCCACCAACC
ATCTACAAGGTGTGA
Protein sequenceShow/hide protein sequence
MGARFEVQQFDGKGDFSLWKIKIMAILRQQKLDFAFMNKKDVLARVTLEELKEMEKLAYSLLILHLSNSVLRQMRGEDKSRPQNGRNVESATQATLTHIKQAGVH
NSLRIEIEVRVKDLLVTVRKNDSFGGLEPTPERRWCRTLIGSSGLGHRKSDRRYPLKSIFRDKGFESPPTIYKV