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Moc11g17840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g17840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr11:13653568..13654242
RNA-Seq ExpressionMoc11g17840
SyntenyMoc11g17840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143639.1 uncharacterized protein LOC111013500 [Momordica charantia]2.9e-3655.32Show/hide
Query:  VALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDF
        VALTKCSSDALGNPLPV CK                                      N+GE  PT+VT QLAD  IKKPE KIE VLVKVDKFIFP DF
Subjt:  VALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDF

Query:  IILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAAEKE
        IILD EADLE                           VNDEQ+TFNVLDV RLPDEVE+CS IGAIMEELQ+M+VEDLE DLEAAEKE
Subjt:  IILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAAEKE

XP_022150097.1 uncharacterized protein LOC111018357 [Momordica charantia]3.3e-4058.19Show/hide
Query:  KDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE-----
        +DIIS+RKKLGEHETVALTKCSSDALGNPLP+ CK        N+G+A PTTVTLQ AD  I+K EGKIEDVL+KVDK  FP DFIILDCE DL+     
Subjt:  KDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE-----

Query:  ----------------------VNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQMMVEDLEGDLEAAEKE
                              VNDEQVTFNVLD MRLPDE+EECSTI       MEE   +++  LE +LE A+KE
Subjt:  ----------------------VNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQMMVEDLEGDLEAAEKE

XP_022150857.1 uncharacterized protein LOC111018901 [Momordica charantia]6.0e-5057.73Show/hide
Query:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI
        M NYTK LKDIIS+ KKL EHETVALTKCSSDALGNPLPV CK                                      N+ EA P TVTLQLA+  I
Subjt:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI

Query:  KKPEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADLEVNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAA
        KKPEGKIEDVLVKVDKFIFP DFI                   +   E  ++VNDEQVTFNVLD MRLPD+VEECSTIGAIMEELQQM+VEDLE DLE A
Subjt:  KKPEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADLEVNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAA

Query:  EKE---FCPNLSILSFCSRQ
        EKE     P   +LSFCSRQ
Subjt:  EKE---FCPNLSILSFCSRQ

XP_022157244.1 uncharacterized protein LOC111024002 [Momordica charantia]2.5e-4056.61Show/hide
Query:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI
        M+NYTK LKDIIS+ KKLGEHETV LTKCSSDAL NPLPV CK                                      N+GEA PTTVTLQLAD  I
Subjt:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI

Query:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAI
        KKPEGKIED+LVKVD+ IFP+DFIILDCEADLE                           VNDEQVTFNVLD M LPDEVEECSTIGAI
Subjt:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAI

XP_022157836.1 uncharacterized protein LOC111024449 [Momordica charantia]1.0e-2842.79Show/hide
Query:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGN-------------------------------------PLPVTCK-NLGEACPTTVTLQLAD-FI
        M  Y K LKDII+++KKLGE+ETVALT+CSS+   +                                     PL +  K  +G+A PTTVTLQLAD  I
Subjt:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGN-------------------------------------PLPVTCK-NLGEACPTTVTLQLAD-FI

Query:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------LEVNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQM
         KPEGKIEDVLVKVDKFIFP DFIIL+CEAD                           + V+D++VTFN+LD M+ PD++EEC+TI    G    EL  +
Subjt:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------LEVNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQM

Query:  MVEDLEGDLEAAEKE
        +  ++E  LE AEKE
Subjt:  MVEDLEGDLEAAEKE

TrEMBL top hitse value%identityAlignment
A0A6J1CPX1 uncharacterized protein LOC1110135001.4e-3655.32Show/hide
Query:  VALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDF
        VALTKCSSDALGNPLPV CK                                      N+GE  PT+VT QLAD  IKKPE KIE VLVKVDKFIFP DF
Subjt:  VALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDF

Query:  IILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAAEKE
        IILD EADLE                           VNDEQ+TFNVLDV RLPDEVE+CS IGAIMEELQ+M+VEDLE DLEAAEKE
Subjt:  IILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAAEKE

A0A6J1D9S6 uncharacterized protein LOC1110183571.6e-4058.19Show/hide
Query:  KDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE-----
        +DIIS+RKKLGEHETVALTKCSSDALGNPLP+ CK        N+G+A PTTVTLQ AD  I+K EGKIEDVL+KVDK  FP DFIILDCE DL+     
Subjt:  KDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------NLGEACPTTVTLQLAD-FIKKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE-----

Query:  ----------------------VNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQMMVEDLEGDLEAAEKE
                              VNDEQVTFNVLD MRLPDE+EECSTI       MEE   +++  LE +LE A+KE
Subjt:  ----------------------VNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQMMVEDLEGDLEAAEKE

A0A6J1DBX0 uncharacterized protein LOC1110189012.9e-5057.73Show/hide
Query:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI
        M NYTK LKDIIS+ KKL EHETVALTKCSSDALGNPLPV CK                                      N+ EA P TVTLQLA+  I
Subjt:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI

Query:  KKPEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADLEVNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAA
        KKPEGKIEDVLVKVDKFIFP DFI                   +   E  ++VNDEQVTFNVLD MRLPD+VEECSTIGAIMEELQQM+VEDLE DLE A
Subjt:  KKPEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADLEVNDEQVTFNVLDVMRLPDEVEECSTIGAIMEELQQMMVEDLEGDLEAA

Query:  EKE---FCPNLSILSFCSRQ
        EKE     P   +LSFCSRQ
Subjt:  EKE---FCPNLSILSFCSRQ

A0A6J1DVY2 uncharacterized protein LOC1110240021.2e-4056.61Show/hide
Query:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI
        M+NYTK LKDIIS+ KKLGEHETV LTKCSSDAL NPLPV CK                                      N+GEA PTTVTLQLAD  I
Subjt:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCK--------------------------------------NLGEACPTTVTLQLAD-FI

Query:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAI
        KKPEGKIED+LVKVD+ IFP+DFIILDCEADLE                           VNDEQVTFNVLD M LPDEVEECSTIGAI
Subjt:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEADLE---------------------------VNDEQVTFNVLDVMRLPDEVEECSTIGAI

A0A6J1DZC3 uncharacterized protein LOC1110244494.9e-2942.79Show/hide
Query:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGN-------------------------------------PLPVTCK-NLGEACPTTVTLQLAD-FI
        M  Y K LKDII+++KKLGE+ETVALT+CSS+   +                                     PL +  K  +G+A PTTVTLQLAD  I
Subjt:  MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGN-------------------------------------PLPVTCK-NLGEACPTTVTLQLAD-FI

Query:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------LEVNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQM
         KPEGKIEDVLVKVDKFIFP DFIIL+CEAD                           + V+D++VTFN+LD M+ PD++EEC+TI    G    EL  +
Subjt:  KKPEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------LEVNDEQVTFNVLDVMRLPDEVEECSTI----GAIMEELQQM

Query:  MVEDLEGDLEAAEKE
        +  ++E  LE AEKE
Subjt:  MVEDLEGDLEAAEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAACTACACTAAGCTTTTAAAAGACATCATATCTAAGCGTAAGAAGTTAGGTGAGCATGAGACAGTAGCCTTGACAAAATGTAGTAGTGATGCTCTAGGGAATCC
ATTGCCTGTTACATGTAAGAACCTAGGAGAAGCTTGTCCCACTACTGTCACTTTACAATTAGCTGATTTCATAAAGAAACCAGAAGGAAAAATAGAAGATGTGCTTGTTA
AAGTTGATAAGTTTATTTTTCCCGTCGATTTCATAATTTTGGACTGTGAAGCAGATCTTGAGGTCAATGATGAGCAGGTAACCTTCAATGTCCTCGATGTGATGCGTCTC
CCAGATGAAGTCGAGGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCAAATGATGGTGGAAGACTTAGAAGGAGATTTGGAGGCCGCAGAAAAAGAATTTTG
CCCCAATTTGAGCATTTTGAGTTTTTGTAGCCGACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAACTACACTAAGCTTTTAAAAGACATCATATCTAAGCGTAAGAAGTTAGGTGAGCATGAGACAGTAGCCTTGACAAAATGTAGTAGTGATGCTCTAGGGAATCC
ATTGCCTGTTACATGTAAGAACCTAGGAGAAGCTTGTCCCACTACTGTCACTTTACAATTAGCTGATTTCATAAAGAAACCAGAAGGAAAAATAGAAGATGTGCTTGTTA
AAGTTGATAAGTTTATTTTTCCCGTCGATTTCATAATTTTGGACTGTGAAGCAGATCTTGAGGTCAATGATGAGCAGGTAACCTTCAATGTCCTCGATGTGATGCGTCTC
CCAGATGAAGTCGAGGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCAAATGATGGTGGAAGACTTAGAAGGAGATTTGGAGGCCGCAGAAAAAGAATTTTG
CCCCAATTTGAGCATTTTGAGTTTTTGTAGCCGACAATAA
Protein sequenceShow/hide protein sequence
MSNYTKLLKDIISKRKKLGEHETVALTKCSSDALGNPLPVTCKNLGEACPTTVTLQLADFIKKPEGKIEDVLVKVDKFIFPVDFIILDCEADLEVNDEQVTFNVLDVMRL
PDEVEECSTIGAIMEELQQMMVEDLEGDLEAAEKEFCPNLSILSFCSRQ