; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g18100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g18100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:13764508..13768004
RNA-Seq ExpressionMoc11g18100
SyntenyMoc11g18100
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.3e-5950.23Show/hide
Query:  DSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFS
        DSL+  V   +GDG  C VW DPWL   PI  + G+RV+YDAAS   A++++F+ PDG W WPRVS++LI+L   V +VR  +   DR VW P   G FS
Subjt:  DSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFS

Query:  VSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWS
        ++SA   +RPR   V +  LLW GGN+PKHSF +WL I+++L TRDRL +W++ VP + + C  G+ESRDHLFF+CP+ R VW+ ++    SSHR+ YW 
Subjt:  VSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWS

Query:  TELTWICHVSARSSVRR
         EL+WICH     SVRR
Subjt:  TELTWICHVSARSSVRR

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.3e-10641.03Show/hide
Query:  QERFNVEVENEDLGELPKKC---------------------------MEMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQETLKEEVCLTKVVKRTR
        +E+ NV+ E+ED GELP++                             +  DEE P +EQ+  S PVDVP+EAMEESSSSSSQ                 
Subjt:  QERFNVEVENEDLGELPKKC---------------------------MEMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQETLKEEVCLTKVVKRTR

Query:  KKKIPAQIAPGTIPRLRSQAAVARLAAQKETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPV
                  G + R R++ AVARLAAQKE EAGP KK K AR  R AEE LEEAN+EE  S EQTPS+ KRVRLEV+RP  TT +IL+E+GFDEAQEPV
Subjt:  KKKIPAQIAPGTIPRLRSQAAVARLAAQKETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPV

Query:  PKHLRRRLVENGWDMLFVPTTRVSEALVKEFYVAINQNQGDDSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGS
        P+++R+R+VENGW+ LF P TRVSEALVKEFY AIN N+GD+                                                          
Subjt:  PKHLRRRLVENGWDMLFVPTTRVSEALVKEFYVAINQNQGDDSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGS

Query:  WWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATC
                                                                                                            
Subjt:  WWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATC

Query:  VFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSARSSVRRHGVVVGALSPCLSLLGTYFRNEVMVHPSDEQVEEARRLICRPR
                                                              VR  G                  NE++VHPSDEQVEEARRLICRP 
Subjt:  VFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSARSSVRRHGVVVGALSPCLSLLGTYFRNEVMVHPSDEQVEEARRLICRPR

Query:  KTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEADD-
        KTWT+STMGK+SLK LDINEQA VW YVVKNRLIPTS DSSIK NRAM+VYIL KG EFNFGELIRNEI+SCS+K+                AGVEA D 
Subjt:  KTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEADD-

Query:  -VVMPKKLVTSLRRVRGYSIVREENSPITVADTETRGVMTREQYDELRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL
         VVMPKK   SLR+VRGYSIVREE+SPIT AD ETRGV+TREQYDELR+KYELLL TQ ATC FLKKIYGD+A S P+ L
Subjt:  -VVMPKKLVTSLRRVRGYSIVREENSPITVADTETRGVMTREQYDELRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]5.6e-5361.03Show/hide
Query:  EMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQ--------------------ETLKEEVCLTKVVKRTRKKKIPAQIAPGTIPRLRSQAAVARLAAQ
        + +DEES VQEQ+ AS  VDVPNEA+EESSSSSS+                     T +E+VCLTKVVK+ R KK   +I PG   R  ++A +A LAAQ
Subjt:  EMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQ--------------------ETLKEEVCLTKVVKRTRKKKIPAQIAPGTIPRLRSQAAVARLAAQ

Query:  KETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPVPKHLRRRLVENGWDMLFVPTTRVSEALV
        KE EAGPFKK KR +GLR +EE L+E N EE  SIEQTPSKAKRVR EVKR + T  EILVEKGFDEAQEPVPK+++RRL+ENGW+ LF PT RVSE LV
Subjt:  KETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPVPKHLRRRLVENGWDMLFVPTTRVSEALV

Query:  KEFYVAINQNQGD
        KEFY  IN N+GD
Subjt:  KEFYVAINQNQGD

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]1.9e-10989.32Show/hide
Query:  GDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPR
        GDGRLCFVWHDPWL  GPIHPRCGDRVIYD ASSSMAKV DFLLPDGSW WPRVS+DL+ELLPEVMSVR VVG+EDR VWTP VSGLFSVSS WGILRPR
Subjt:  GDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPR

Query:  RPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSAR
        RPPV YF LLWFGGNIPKHSFISWLAIRDRL TR+RLRQWNALVPATCVFCAGLESRDHLF  CPYSRAVWAGMISWAGSSHRVSYWSTELTWICHV+  
Subjt:  RPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSAR

Query:  SSVRRH
        SS RRH
Subjt:  SSVRRH

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]4.0e-5170Show/hide
Query:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEAD--DVVMPKKLVTSLRRVRGYSIVRE
        +W+YVVKN LI TS DSSI+  R M+VYIL KG EFNF ELIRNEI  C++KMVGPLIFP  I ELCL+AGVEAD  DVVM KK  TS+RRVRGY IVRE
Subjt:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEAD--DVVMPKKLVTSLRRVRGYSIVRE

Query:  ENSPITVADTETRGVMTREQYDE---LRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL
        E+SPIT AD +TRGV+TREQYDE   LR+ Y+LL  TQ+ATCEFLKK+YGD A S+P+ L
Subjt:  ENSPITVADTETRGVMTREQYDE---LRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL

TrEMBL top hitse value%identityAlignment
A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.1e-5950.23Show/hide
Query:  DSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFS
        DSL+  V   +GDG  C VW DPWL   PI  + G+RV+YDAAS   A++++F+ PDG W WPRVS++LI+L   V +VR  +   DR VW P   G FS
Subjt:  DSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFS

Query:  VSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWS
        ++SA   +RPR   V +  LLW GGN+PKHSF +WL I+++L TRDRL +W++ VP + + C  G+ESRDHLFF+CP+ R VW+ ++    SSHR+ YW 
Subjt:  VSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWS

Query:  TELTWICHVSARSSVRR
         EL+WICH     SVRR
Subjt:  TELTWICHVSARSSVRR

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.6e-10641.03Show/hide
Query:  QERFNVEVENEDLGELPKKC---------------------------MEMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQETLKEEVCLTKVVKRTR
        +E+ NV+ E+ED GELP++                             +  DEE P +EQ+  S PVDVP+EAMEESSSSSSQ                 
Subjt:  QERFNVEVENEDLGELPKKC---------------------------MEMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQETLKEEVCLTKVVKRTR

Query:  KKKIPAQIAPGTIPRLRSQAAVARLAAQKETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPV
                  G + R R++ AVARLAAQKE EAGP KK K AR  R AEE LEEAN+EE  S EQTPS+ KRVRLEV+RP  TT +IL+E+GFDEAQEPV
Subjt:  KKKIPAQIAPGTIPRLRSQAAVARLAAQKETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPV

Query:  PKHLRRRLVENGWDMLFVPTTRVSEALVKEFYVAINQNQGDDSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGS
        P+++R+R+VENGW+ LF P TRVSEALVKEFY AIN N+GD+                                                          
Subjt:  PKHLRRRLVENGWDMLFVPTTRVSEALVKEFYVAINQNQGDDSLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGS

Query:  WWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATC
                                                                                                            
Subjt:  WWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATC

Query:  VFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSARSSVRRHGVVVGALSPCLSLLGTYFRNEVMVHPSDEQVEEARRLICRPR
                                                              VR  G                  NE++VHPSDEQVEEARRLICRP 
Subjt:  VFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSARSSVRRHGVVVGALSPCLSLLGTYFRNEVMVHPSDEQVEEARRLICRPR

Query:  KTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEADD-
        KTWT+STMGK+SLK LDINEQA VW YVVKNRLIPTS DSSIK NRAM+VYIL KG EFNFGELIRNEI+SCS+K+                AGVEA D 
Subjt:  KTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEADD-

Query:  -VVMPKKLVTSLRRVRGYSIVREENSPITVADTETRGVMTREQYDELRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL
         VVMPKK   SLR+VRGYSIVREE+SPIT AD ETRGV+TREQYDELR+KYELLL TQ ATC FLKKIYGD+A S P+ L
Subjt:  -VVMPKKLVTSLRRVRGYSIVREENSPITVADTETRGVMTREQYDELRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL

A0A6J1DW11 uncharacterized protein LOC1110236202.7e-5361.03Show/hide
Query:  EMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQ--------------------ETLKEEVCLTKVVKRTRKKKIPAQIAPGTIPRLRSQAAVARLAAQ
        + +DEES VQEQ+ AS  VDVPNEA+EESSSSSS+                     T +E+VCLTKVVK+ R KK   +I PG   R  ++A +A LAAQ
Subjt:  EMNDEESPVQEQDEASSPVDVPNEAMEESSSSSSQ--------------------ETLKEEVCLTKVVKRTRKKKIPAQIAPGTIPRLRSQAAVARLAAQ

Query:  KETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPVPKHLRRRLVENGWDMLFVPTTRVSEALV
        KE EAGPFKK KR +GLR +EE L+E N EE  SIEQTPSKAKRVR EVKR + T  EILVEKGFDEAQEPVPK+++RRL+ENGW+ LF PT RVSE LV
Subjt:  KETEAGPFKKVKRARGLRGAEEQLEEANKEESASIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPVPKHLRRRLVENGWDMLFVPTTRVSEALV

Query:  KEFYVAINQNQGD
        KEFY  IN N+GD
Subjt:  KEFYVAINQNQGD

A0A6J1E204 uncharacterized protein LOC1110257021.9e-5170Show/hide
Query:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEAD--DVVMPKKLVTSLRRVRGYSIVRE
        +W+YVVKN LI TS DSSI+  R M+VYIL KG EFNF ELIRNEI  C++KMVGPLIFP  I ELCL+AGVEAD  DVVM KK  TS+RRVRGY IVRE
Subjt:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEAD--DVVMPKKLVTSLRRVRGYSIVRE

Query:  ENSPITVADTETRGVMTREQYDE---LRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL
        E+SPIT AD +TRGV+TREQYDE   LR+ Y+LL  TQ+ATCEFLKK+YGD A S+P+ L
Subjt:  ENSPITVADTETRGVMTREQYDE---LRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVL

A0A6J1E271 uncharacterized protein LOC1110253249.1e-11089.32Show/hide
Query:  GDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPR
        GDGRLCFVWHDPWL  GPIHPRCGDRVIYD ASSSMAKV DFLLPDGSW WPRVS+DL+ELLPEVMSVR VVG+EDR VWTP VSGLFSVSS WGILRPR
Subjt:  GDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPR

Query:  RPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSAR
        RPPV YF LLWFGGNIPKHSFISWLAIRDRL TR+RLRQWNALVPATCVFCAGLESRDHLF  CPYSRAVWAGMISWAGSSHRVSYWSTELTWICHV+  
Subjt:  RPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSAR

Query:  SSVRRH
        SS RRH
Subjt:  SSVRRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.9e-2131.69Show/hide
Query:  RPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTP---VVSGLFS
        RP V   +G G     WHD W   GP+                     D + P G      + +D + L+            +D  +W       S +FS
Subjt:  RPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTP---VVSGLFS

Query:  VSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVW
         +     L P+   VP++  +WF  ++PKH+FI W+   +RL TRDRLR W   +PA C+ C +  ESR HLFF CP+  AVW
Subjt:  VSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVW

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-2432.41Show/hide
Query:  LRPL----VRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQ---EDRLVWTPVV
        LRPL    V+  LG+GR+   WHD W   GP+    GD           A+V + L  +G W  P       + + + +S          ED   W  VV
Subjt:  LRPL----VRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQ---EDRLVWTPVV

Query:  SGL----FSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCA-GLESRDHLFFACPYSRAVWAGMISWAG
         G+    FS +  W  +RPR P + +   +WF G +PKH+F  W++  DRL TR RL  W  +    C  C    ESRDHL F+C ++  VW    S   
Subjt:  SGL----FSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCA-GLESRDHLFFACPYSRAVWAGMISWAG

Query:  SSHRV-SYWSTELTWI
           R+   W+  L+W+
Subjt:  SSHRV-SYWSTELTWI

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-2534.21Show/hide
Query:  RPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVS-------MDLIELLPEVMSVRAVVGQEDRLVWTP---
        RP +   +G G     WHD W+  GP+    G            A V D L   G+ WW   S       + L  LLPE   +      +D  +W     
Subjt:  RPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVS-------MDLIELLPEVMSVRAVVGQEDRLVWTP---

Query:  VVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVW
          S  FS    W  L P+   VP+   +WF  ++PKH+FI W+   +RL TRDRL+ W   +PA C+ C A  +SR HLFF C +S  VW
Subjt:  VVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFC-AGLESRDHLFFACPYSRAVW

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.3e-2535.6Show/hide
Query:  LRPLVRTV----LGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWW--WPRVSMDLIELLPEVMSVRAVV-----GQEDRLVW
        LRP+ R      +G G  C  W + W   GP+    GD     +     A VAD  L DG WW    R    +I+LL   + + +VV      ++D  +W
Subjt:  LRPLVRTV----LGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWW--WPRVSMDLIELLPEVMSVRAVV-----GQEDRLVW

Query:  T---PVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCAGL-ESRDHLFFACPYS
               S  FS ++ W  L P    V +   +WF G IPKH+FISW+ IR RL TRD+L  W   VP+ C+ C    E+R HLFF C ++
Subjt:  T---PVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCAGL-ESRDHLFFACPYS

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.6e-2129.26Show/hide
Query:  SLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQ---EDRLVWTPVVSGL
        S+   +R  +G+G     W+D W   G +    G            A+V +    +G W+ P    D  +L    +++  V  +   +D  +W       
Subjt:  SLRPLVRTVLGDGRLCFVWHDPWLPAGPIHPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQ---EDRLVWTPVVSGL

Query:  ---FSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCA-GLESRDHLFFACPYSRAVW
           FS    W  +R   P VP+  ++WF   IP+ S I+W++  +RL TRDRLR W   +P++ V C+ G E+  HLFF C +S A+W
Subjt:  ---FSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRDRLSTRDRLRQWNALVPATCVFCA-GLESRDHLFFACPYSRAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACTCTTCCTCCTCCAAGCCGAAAGACAAAGAAAAGAGGAAGAAGAAAGCGTTGTTGCTACCGCCGACTCCACCAGGTCAAGAACAGGTCAGTGGAAAGTCTGA
ACATGACACAGAGCCCTTGGAGCATTCAGATTTAGCCATAGTCGAAATACAATGCCAAATTGTGCCTAGAAATTTTAGAGGATACTCCACCAGCCACTCTACAAGGGAAG
AATATCCATTGGAGGACGATGGAAACAATGGGAAGGCACAAGAAAGATTTAATGTTGAGGTGGAGAATGAGGATCTTGGAGAATTACCCAAGAAGTGCATGGAGATGAAT
GATGAGGAGTCCCCTGTACAAGAGCAAGACGAAGCATCCAGTCCTGTGGATGTCCCAAATGAGGCTATGGAGGAATCATCTTCATCTTCCTCACAAGAGACCTTAAAGGA
AGAGGTGTGCTTGACCAAAGTGGTGAAGAGAACGAGAAAGAAGAAAATTCCGGCCCAAATTGCACCTGGCACAATTCCCAGGCTGCGTAGTCAAGCAGCTGTAGCACGTT
TGGCTGCCCAAAAAGAAACCGAGGCTGGACCATTTAAAAAAGTCAAGAGGGCTAGGGGGCTAAGAGGGGCAGAAGAGCAACTTGAGGAGGCCAACAAAGAGGAGTCTGCT
TCTATTGAGCAAACACCATCCAAAGCAAAAAGAGTGAGATTGGAAGTGAAAAGGCCTGACTTGACAACATGCGAGATCCTAGTTGAGAAGGGCTTTGATGAAGCTCAAGA
GCCCGTCCCAAAACATCTCAGGAGACGGCTTGTGGAGAATGGTTGGGATATGTTGTTTGTCCCAACTACGCGTGTATCTGAGGCCTTGGTGAAGGAATTTTATGTTGCCA
TCAACCAAAACCAAGGAGACGATTCACTCCGTCCTCTGGTGCGTACTGTTCTTGGGGATGGTCGACTTTGTTTTGTGTGGCACGATCCCTGGTTACCGGCGGGTCCGATT
CACCCGAGGTGTGGGGATAGGGTCATCTATGATGCTGCTAGCTCTTCTATGGCTAAGGTTGCTGACTTTTTGCTTCCTGACGGTTCCTGGTGGTGGCCTCGTGTTTCAAT
GGATCTTATTGAGCTTCTTCCGGAGGTGATGTCGGTGCGAGCTGTGGTTGGTCAGGAGGATCGCCTTGTCTGGACTCCTGTGGTGTCTGGTCTTTTTTCGGTCTCTAGTG
CTTGGGGGATTCTTCGTCCTCGTCGTCCCCCAGTTCCTTATTTTTCCTTGTTATGGTTTGGTGGGAATATCCCTAAACATTCGTTTATTTCTTGGTTGGCAATTCGTGAT
CGCCTTTCTACGCGTGATCGTCTTCGCCAGTGGAATGCGTTGGTGCCTGCTACTTGTGTTTTTTGTGCTGGTTTGGAGTCTCGGGATCATCTGTTTTTTGCTTGCCCTTA
TAGTAGAGCGGTTTGGGCTGGTATGATTTCGTGGGCAGGTTCGTCTCATCGGGTTTCATATTGGTCTACAGAGCTTACTTGGATTTGTCATGTTAGTGCTAGGTCGTCTG
TTCGGCGGCATGGAGTTGTTGTTGGAGCTCTGAGCCCATGCTTGTCTTTGCTTGGGACTTATTTTCGAAATGAAGTTATGGTGCATCCTTCGGACGAGCAAGTGGAGGAG
GCACGTCGACTTATTTGTAGACCACGCAAGACATGGACCGTCTCAACAATGGGAAAGATTTCCTTAAAGTCCCTTGACATCAATGAACAAGCAATGGTTTGGACGTATGT
GGTGAAGAATAGGTTGATTCCCACTTCTAACGATTCCTCCATTAAGTGCAATAGGGCGATGATGGTGTACATCCTGAAGAAGGGCACTGAGTTCAATTTTGGCGAACTCA
TAAGGAATGAAATTCGGAGTTGCTCGAAGAAAATGGTAGGTCCACTTATTTTTCCTGGATTAATAACTGAGTTATGCTTACAAGCAGGAGTAGAGGCTGATGATGTAGTG
ATGCCCAAGAAGCTTGTCACATCCCTACGAAGAGTTCGGGGATATTCGATCGTTCGAGAGGAAAATTCTCCCATTACCGTTGCGGATACCGAGACCCGAGGAGTGATGAC
TAGGGAGCAATATGACGAGCTAAGGAACAAGTACGAGCTTCTTTTGACTACTCAAAATGCCACATGTGAGTTCCTCAAGAAGATATACGGTGATGATGCACATTCGATCC
CCAATGTCCTACTGATTCCACCGGCGATGAATCTTGAGATGATGATTAGGGGAGTATCTCTCTCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACTCTTCCTCCTCCAAGCCGAAAGACAAAGAAAAGAGGAAGAAGAAAGCGTTGTTGCTACCGCCGACTCCACCAGGTCAAGAACAGGTCAGTGGAAAGTCTGA
ACATGACACAGAGCCCTTGGAGCATTCAGATTTAGCCATAGTCGAAATACAATGCCAAATTGTGCCTAGAAATTTTAGAGGATACTCCACCAGCCACTCTACAAGGGAAG
AATATCCATTGGAGGACGATGGAAACAATGGGAAGGCACAAGAAAGATTTAATGTTGAGGTGGAGAATGAGGATCTTGGAGAATTACCCAAGAAGTGCATGGAGATGAAT
GATGAGGAGTCCCCTGTACAAGAGCAAGACGAAGCATCCAGTCCTGTGGATGTCCCAAATGAGGCTATGGAGGAATCATCTTCATCTTCCTCACAAGAGACCTTAAAGGA
AGAGGTGTGCTTGACCAAAGTGGTGAAGAGAACGAGAAAGAAGAAAATTCCGGCCCAAATTGCACCTGGCACAATTCCCAGGCTGCGTAGTCAAGCAGCTGTAGCACGTT
TGGCTGCCCAAAAAGAAACCGAGGCTGGACCATTTAAAAAAGTCAAGAGGGCTAGGGGGCTAAGAGGGGCAGAAGAGCAACTTGAGGAGGCCAACAAAGAGGAGTCTGCT
TCTATTGAGCAAACACCATCCAAAGCAAAAAGAGTGAGATTGGAAGTGAAAAGGCCTGACTTGACAACATGCGAGATCCTAGTTGAGAAGGGCTTTGATGAAGCTCAAGA
GCCCGTCCCAAAACATCTCAGGAGACGGCTTGTGGAGAATGGTTGGGATATGTTGTTTGTCCCAACTACGCGTGTATCTGAGGCCTTGGTGAAGGAATTTTATGTTGCCA
TCAACCAAAACCAAGGAGACGATTCACTCCGTCCTCTGGTGCGTACTGTTCTTGGGGATGGTCGACTTTGTTTTGTGTGGCACGATCCCTGGTTACCGGCGGGTCCGATT
CACCCGAGGTGTGGGGATAGGGTCATCTATGATGCTGCTAGCTCTTCTATGGCTAAGGTTGCTGACTTTTTGCTTCCTGACGGTTCCTGGTGGTGGCCTCGTGTTTCAAT
GGATCTTATTGAGCTTCTTCCGGAGGTGATGTCGGTGCGAGCTGTGGTTGGTCAGGAGGATCGCCTTGTCTGGACTCCTGTGGTGTCTGGTCTTTTTTCGGTCTCTAGTG
CTTGGGGGATTCTTCGTCCTCGTCGTCCCCCAGTTCCTTATTTTTCCTTGTTATGGTTTGGTGGGAATATCCCTAAACATTCGTTTATTTCTTGGTTGGCAATTCGTGAT
CGCCTTTCTACGCGTGATCGTCTTCGCCAGTGGAATGCGTTGGTGCCTGCTACTTGTGTTTTTTGTGCTGGTTTGGAGTCTCGGGATCATCTGTTTTTTGCTTGCCCTTA
TAGTAGAGCGGTTTGGGCTGGTATGATTTCGTGGGCAGGTTCGTCTCATCGGGTTTCATATTGGTCTACAGAGCTTACTTGGATTTGTCATGTTAGTGCTAGGTCGTCTG
TTCGGCGGCATGGAGTTGTTGTTGGAGCTCTGAGCCCATGCTTGTCTTTGCTTGGGACTTATTTTCGAAATGAAGTTATGGTGCATCCTTCGGACGAGCAAGTGGAGGAG
GCACGTCGACTTATTTGTAGACCACGCAAGACATGGACCGTCTCAACAATGGGAAAGATTTCCTTAAAGTCCCTTGACATCAATGAACAAGCAATGGTTTGGACGTATGT
GGTGAAGAATAGGTTGATTCCCACTTCTAACGATTCCTCCATTAAGTGCAATAGGGCGATGATGGTGTACATCCTGAAGAAGGGCACTGAGTTCAATTTTGGCGAACTCA
TAAGGAATGAAATTCGGAGTTGCTCGAAGAAAATGGTAGGTCCACTTATTTTTCCTGGATTAATAACTGAGTTATGCTTACAAGCAGGAGTAGAGGCTGATGATGTAGTG
ATGCCCAAGAAGCTTGTCACATCCCTACGAAGAGTTCGGGGATATTCGATCGTTCGAGAGGAAAATTCTCCCATTACCGTTGCGGATACCGAGACCCGAGGAGTGATGAC
TAGGGAGCAATATGACGAGCTAAGGAACAAGTACGAGCTTCTTTTGACTACTCAAAATGCCACATGTGAGTTCCTCAAGAAGATATACGGTGATGATGCACATTCGATCC
CCAATGTCCTACTGATTCCACCGGCGATGAATCTTGAGATGATGATTAGGGGAGTATCTCTCTCTTTTTGA
Protein sequenceShow/hide protein sequence
MEDSSSSKPKDKEKRKKKALLLPPTPPGQEQVSGKSEHDTEPLEHSDLAIVEIQCQIVPRNFRGYSTSHSTREEYPLEDDGNNGKAQERFNVEVENEDLGELPKKCMEMN
DEESPVQEQDEASSPVDVPNEAMEESSSSSSQETLKEEVCLTKVVKRTRKKKIPAQIAPGTIPRLRSQAAVARLAAQKETEAGPFKKVKRARGLRGAEEQLEEANKEESA
SIEQTPSKAKRVRLEVKRPDLTTCEILVEKGFDEAQEPVPKHLRRRLVENGWDMLFVPTTRVSEALVKEFYVAINQNQGDDSLRPLVRTVLGDGRLCFVWHDPWLPAGPI
HPRCGDRVIYDAASSSMAKVADFLLPDGSWWWPRVSMDLIELLPEVMSVRAVVGQEDRLVWTPVVSGLFSVSSAWGILRPRRPPVPYFSLLWFGGNIPKHSFISWLAIRD
RLSTRDRLRQWNALVPATCVFCAGLESRDHLFFACPYSRAVWAGMISWAGSSHRVSYWSTELTWICHVSARSSVRRHGVVVGALSPCLSLLGTYFRNEVMVHPSDEQVEE
ARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQAGVEADDVV
MPKKLVTSLRRVRGYSIVREENSPITVADTETRGVMTREQYDELRNKYELLLTTQNATCEFLKKIYGDDAHSIPNVLLIPPAMNLEMMIRGVSLSF