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Moc11g18280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g18280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr11:13918205..13918942
RNA-Seq ExpressionMoc11g18280
SyntenyMoc11g18280
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.3e-1487.76Show/hide
Query:  YNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS
        Y+ WIKAND+AKVYILASISDVLAKKHED +TAKEIMDSLQS FGQPSS
Subjt:  YNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]8.0e-1586.27Show/hide
Query:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS
        N Y+ WIKAND+AKVYIL+SISDVLAKKHED VTAKEIMDSLQS FGQPSS
Subjt:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS

XP_022155999.1 uncharacterized protein LOC111022974 [Momordica charantia]9.8e-1374.07Show/hide
Query:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS
        R   + Y+ WIKAND+AKVYILASISDVLAKKHE+MV A+EIMDSL+  FGQPS
Subjt:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]1.7e-1270.37Show/hide
Query:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS
        R  ++ Y+ WIKAND+AK+YILA+IS+VLAKKH+ MVTA+EIMDSLQ  FGQPS
Subjt:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]6.8e-1484Show/hide
Query:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS
        N Y+ WIK+ND+AKVYILASISDVLAKKHED VT KEIMDSLQS FGQPS
Subjt:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200951.1e-1487.76Show/hide
Query:  YNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS
        Y+ WIKAND+AKVYILASISDVLAKKHED +TAKEIMDSLQS FGQPSS
Subjt:  YNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS

A0A6J1DMS3 uncharacterized protein LOC1110220003.9e-1586.27Show/hide
Query:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS
        N Y+ WIKAND+AKVYIL+SISDVLAKKHED VTAKEIMDSLQS FGQPSS
Subjt:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS

A0A6J1DRZ2 uncharacterized protein LOC1110229744.8e-1374.07Show/hide
Query:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS
        R   + Y+ WIKAND+AKVYILASISDVLAKKHE+MV A+EIMDSL+  FGQPS
Subjt:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS

A0A6J1DVX8 uncharacterized protein LOC1110235918.1e-1370.37Show/hide
Query:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS
        R  ++ Y+ WIKAND+AK+YILA+IS+VLAKKH+ MVTA+EIMDSLQ  FGQPS
Subjt:  RTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS

A0A6J1DWL0 uncharacterized protein LOC1110247343.3e-1484Show/hide
Query:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS
        N Y+ WIK+ND+AKVYILASISDVLAKKHED VT KEIMDSLQS FGQPS
Subjt:  NTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTACATATCGTCCTGGAGCGATCATCCCCACGAAGGGTCCATTGATAAGAGTTTCTTAGGTTTTGCTCCAATATTTTCCTTCCCTACAGTAGGATTATTG
GGGCGGACCTTTGAGAACACCTATAACCATTGGATCAAGGCCAACGACGAAGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAG
GACATGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCACGTTTGGACAACCGTCCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTACATATCGTCCTGGAGCGATCATCCCCACGAAGGGTCCATTGATAAGAGTTTCTTAGGTTTTGCTCCAATATTTTCCTTCCCTACAGTAGGATTATTG
GGGCGGACCTTTGAGAACACCTATAACCATTGGATCAAGGCCAACGACGAAGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAG
GACATGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCACGTTTGGACAACCGTCCTCATAG
Protein sequenceShow/hide protein sequence
MTYISSWSDHPHEGSIDKSFLGFAPIFSFPTVGLLGRTFENTYNHWIKANDEAKVYILASISDVLAKKHEDMVTAKEIMDSLQSTFGQPSS