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Moc11g25540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g25540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr11:18690988..18694218
RNA-Seq ExpressionMoc11g25540
SyntenyMoc11g25540
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155289.1 uncharacterized protein LOC111022426 [Momordica charantia]8.8e-0650.94Show/hide
Query:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
        N+ ++AAM+D H  + PLL EI  IREG+RL   LG+ ++++ES+SLEA+ LI
Subjt:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]3.7e-0447.17Show/hide
Query:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
        N+ ++ AMVD H  + PLLA+I  IREG+ L   LG+ ++++E++SLEA+ LI
Subjt:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
TrEMBL top hitse value%identityAlignment
A0A6J1DPU1 uncharacterized protein LOC1110224264.3e-0650.94Show/hide
Query:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
        N+ ++AAM+D H  + PLL EI  IREG+RL   LG+ ++++ES+SLEA+ LI
Subjt:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
A0A6J1DZK3 uncharacterized protein LOC1110249681.8e-0447.17Show/hide
Query:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
        N+ ++ AMVD H  + PLLA+I  IREG+ L   LG+ ++++E++SLEA+ LI
Subjt:  NSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTCAAATCACTCAAATCAGAGTTTAAACGAAGAAGTTATGGTCAAAACAAGTCAGGAGAAAAATCTCACGTGGCGGGTGACGTAGACAAGTGGACAAAT
CCTACATGGAACGAAAATTCAAACTTGATTGCAGCCATGGTGGATGTTCATGCATGCAGAAATCCTCTCTTGGCAGAAATACGGGTGATTCGCGAGGGCATGAGA
CTTGTGTTGCATCTAGGTTTGCAGAAGATCCTAATTGAGTCTAATTCTTTGGAGGCAATTAAGCTGATCTGTGAAAGCCGAGTGGAGAGGAATCAAACCACGGGA
CTCATTCTTCGGCAAGGAAAGCCCTTAGAAAACCAAAAACTGAATTGCTACATTTTTATAAAATTGCGATACAACGCTATGGCGCTTCGGACGGAGAACCGTCTG
CGCGCACAACAGGACAGTGTTGTGCGCCACGGCACTGCTTCCTCAGCCCTCCTGGCCTGTAGCGCTCCACTTCACCTGATTTCATCCCTAACCTGCCCCGACGGG
TCACGACTTGATTCTGAATCGTCCCTAGCTCGTTCCGACGTCGTTTTGACTCCACCAATCCCAATAATGCCCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGTCAAATCACTCAAATCAGAGTTTAAACGAAGAAGTTATGGTCAAAACAAGTCAGGAGAAAAATCTCACGTGGCGGGTGACGTAGACAAGTGGACAAAT
CCTACATGGAACGAAAATTCAAACTTGATTGCAGCCATGGTGGATGTTCATGCATGCAGAAATCCTCTCTTGGCAGAAATACGGGTGATTCGCGAGGGCATGAGA
CTTGTGTTGCATCTAGGTTTGCAGAAGATCCTAATTGAGTCTAATTCTTTGGAGGCAATTAAGCTGATCTGTGAAAGCCGAGTGGAGAGGAATCAAACCACGGGA
CTCATTCTTCGGCAAGGAAAGCCCTTAGAAAACCAAAAACTGAATTGCTACATTTTTATAAAATTGCGATACAACGCTATGGCGCTTCGGACGGAGAACCGTCTG
CGCGCACAACAGGACAGTGTTGTGCGCCACGGCACTGCTTCCTCAGCCCTCCTGGCCTGTAGCGCTCCACTTCACCTGATTTCATCCCTAACCTGCCCCGACGGG
TCACGACTTGATTCTGAATCGTCCCTAGCTCGTTCCGACGTCGTTTTGACTCCACCAATCCCAATAATGCCCCCTTAG
Protein sequenceShow/hide protein sequence
MPVKSLKSEFKRRSYGQNKSGEKSHVAGDVDKWTNPTWNENSNLIAAMVDVHACRNPLLAEIRVIREGMRLVLHLGLQKILIESNSLEAIKLICESRVERNQTTG
LILRQGKPLENQKLNCYIFIKLRYNAMALRTENRLRAQQDSVVRHGTASSALLACSAPLHLISSLTCPDGSRLDSESSLARSDVVLTPPIPIMPP